2018-03-10 01:29:01,060 INFO     quick_adcp   importing numpy version 1.11.0
2018-03-10 01:29:01,082 INFO     quick_adcp   importing matplotlib version 1.5.1
2018-03-10 01:29:01,412 INFO     quick_adcp   =====================================================
2018-03-10 01:29:01,412 INFO     quick_adcp   =====================================================
2018-03-10 01:29:01,412 INFO     quick_adcp   command line was: /usr/local/currents/bin/run_quick.py -d os75nb
2018-03-10 01:29:01,412 INFO     quick_adcp   cwd is /home/data/SKQ201805T/proc/os75nb
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2018-03-10 01:29:01,418 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,418 INFO     quick_adcp   step 1: set up files in "edit" directory 

2018-03-10 01:29:01,418 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,418 INFO     quick_adcp   step 2: scan files for time range

2018-03-10 01:29:01,465 INFO     quick_adcp   looking for database with adcpdb/a_skq*.blk
2018-03-10 01:29:01,466 INFO     quick_adcp   database found: listing blocks
2018-03-10 01:29:01,482 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,483 INFO     quick_adcp   step 3: generate averaged data...
2018-03-10 01:29:01,514 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,514 INFO     quick_adcp   step 4: load averaged data (to database)
2018-03-10 01:29:01,570 INFO     quick_adcp   database time range:
2018-03-10 01:29:01,570 INFO     quick_adcp   2018/03/06  23:38:38 to 2018/03/10  01:06:26
2018-03-10 01:29:01,571 INFO     quick_adcp   (64.985162 to 68.046134)
2018-03-10 01:29:01,583 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,583 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2018-03-10 01:29:01,583 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,583 INFO     quick_adcp   step 6: run setflags?

2018-03-10 01:29:01,600 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:01,600 INFO     quick_adcp   step 7: get navigation

2018-03-10 01:29:02,039 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:02,039 INFO     quick_adcp   step 8: list heading

2018-03-10 01:29:02,052 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:02,052 INFO     quick_adcp   step 9: plot heading correction

2018-03-10 01:29:02,851 INFO     quick_adcp   
-------------------------
2018-03-10 01:29:02,851 INFO     quick_adcp   ---- running navsteps ---
2018-03-10 01:29:02,851 INFO     quick_adcp   -------------------------
2018-03-10 01:29:02,851 INFO     quick_adcp   step 10: nav steps: run adcpsect
2018-03-10 01:29:02,851 INFO     quick_adcp   navstep 1
2018-03-10 01:29:02,870 INFO     quick_adcp   -------------------------
2018-03-10 01:29:02,870 INFO     quick_adcp   step 11: nav steps: run refabs
2018-03-10 01:29:02,870 INFO     quick_adcp   navstep 2
2018-03-10 01:29:02,888 INFO     quick_adcp   -------------------------
2018-03-10 01:29:02,889 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2018-03-10 01:29:02,889 INFO     quick_adcp   navstep 3
2018-03-10 01:29:02,936 INFO     quick_adcp   -------------------------
2018-03-10 01:29:02,936 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2018-03-10 01:29:02,936 INFO     quick_adcp   navstep 4
2018-03-10 01:29:03,055 INFO     quick_adcp   -------------------------
2018-03-10 01:29:03,055 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2018-03-10 01:29:03,055 INFO     quick_adcp   navstep 5
2018-03-10 01:29:03,453 INFO     quick_adcp   -------------------------
2018-03-10 01:29:03,454 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2018-03-10 01:29:03,454 INFO     quick_adcp   navstep 6
2018-03-10 01:29:04,231 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,232 INFO     quick_adcp   step 10: find profile flags 

2018-03-10 01:29:04,294 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,294 INFO     quick_adcp   step 11: apply editing 

2018-03-10 01:29:04,331 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,331 INFO     quick_adcp   step 12: run calibration steps 

2018-03-10 01:29:04,442 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,442 INFO     quick_adcp   step 13: extract and plot temperature 

2018-03-10 01:29:04,742 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,742 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2018-03-10 01:29:04,924 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:04,924 INFO     quick_adcp   step 15: extract matlab "allbins" 

2018-03-10 01:29:05,076 INFO     quick_adcp   ---------------------------------------------
2018-03-10 01:29:05,076 INFO     quick_adcp   writing "cruise_info.txt"