2017-06-14 00:47:20,495 INFO     quick_adcp   importing numpy
2017-06-14 00:47:20,511 INFO     quick_adcp   importing matplotlib
2017-06-14 00:47:20,582 INFO     quick_adcp   cwd is /data/MGL1704/proc/os75nb
about to run these steps:
 - editsetup
 - scandata
 - avg_and_load
 - setflags
 - getnav
 - get_headcorr
 - rotate
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - calib
 - matfiles
 - find_pflags
2017-06-14 00:47:20,583 INFO     quick_adcp   original fix file is a_mgl.gps
2017-06-14 00:47:20,597 INFO     quick_adcp   smoothed nav file is a_mgl_refsm.asc
2017-06-14 00:47:20,619 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:20,619 INFO     quick_adcp   step 1: set up editing files 
2017-06-14 00:47:20,620 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:20,620 INFO     quick_adcp   step 2: scan files for time range
2017-06-14 00:47:20,620 INFO     quick_adcp   about to run numpy scan, requiring python gbins
2017-06-14 00:47:20,931 INFO     quick_adcp   in quick_adcp.py: after scan; look for database times in  
  /data/MGL1704/proc/os75nb 
2017-06-14 00:47:20,931 INFO     quick_adcp   looking for database with adcpdb/a_mgl*.blk
2017-06-14 00:47:20,932 INFO     quick_adcp   database found: listing blocks
2017-06-14 00:47:20,944 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:20,945 INFO     quick_adcp   step 3: generate averaged data...
2017-06-14 00:47:20,987 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:20,987 INFO     quick_adcp   step 4: load averaged data (to database)
2017-06-14 00:47:21,031 INFO     quick_adcp   loaded_time_range is 2017/05/28  05:36:55 to 2017/06/14  00:46:53 
2017-06-14 00:47:21,031 INFO     quick_adcp   (147.233970 to 164.032558)
2017-06-14 00:47:21,031 INFO     quick_adcp   origdb_time_range is 2017/05/28  05:36:55 to 2017/06/14  00:31:54 
2017-06-14 00:47:21,031 INFO     quick_adcp   (147.233970 to 164.022153)
2017-06-14 00:47:21,032 INFO     quick_adcp   thisload_time_range is 2017/06/13 21:36:53  to  2017/06/14 00:46:53 
2017-06-14 00:47:21,032 INFO     quick_adcp   (163.900613 to 163.900613)
2017-06-14 00:47:21,032 INFO     quick_adcp   ---------------------
2017-06-14 00:47:22,547 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:22,547 INFO     quick_adcp   step 5: set up files for gautoedit.py
2017-06-14 00:47:22,547 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:22,548 INFO     quick_adcp   step 6: set up files for gautoedit.py
2017-06-14 00:47:22,586 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:22,586 INFO     quick_adcp   step 7: get navigation
2017-06-14 00:47:22,617 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:22,618 INFO     quick_adcp   step 8: get heading correction
2017-06-14 00:47:23,384 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:23,384 INFO     quick_adcp   step 9: rotate velocities
2017-06-14 00:47:23,389 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:23,389 INFO     quick_adcp   step 10: nav steps: run adcpsect
2017-06-14 00:47:23,444 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:23,444 INFO     quick_adcp   step 11: nav steps: run refabs
2017-06-14 00:47:23,491 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:23,491 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2017-06-14 00:47:23,714 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:23,714 INFO     quick_adcp   step 13: nav steps: smooth navigation
2017-06-14 00:47:23,714 INFO     quick_adcp   about to run numpy refsm
2017-06-14 00:47:24,052 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:24,052 INFO     quick_adcp   step 14: nav steps: put smoothed nav into codasdb 
2017-06-14 00:47:24,119 INFO     quick_adcp   plotting navigation
2017-06-14 00:47:24,480 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:24,480 INFO     quick_adcp   step 15: nav steps: make reflayer plots 
2017-06-14 00:47:25,318 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:25,318 INFO     quick_adcp   step 16: find profile flags 
2017-06-14 00:47:25,499 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:25,499 INFO     quick_adcp   step 17: apply editing 
2017-06-14 00:47:25,562 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:25,562 INFO     quick_adcp   step 18: run nav steps 
2017-06-14 00:47:28,329 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:28,330 INFO     quick_adcp   step 19: plot temperature 
2017-06-14 00:47:28,676 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:28,676 INFO     quick_adcp   step 20: run calibration steps 
2017-06-14 00:47:29,760 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:29,760 INFO     quick_adcp   step 21: extract matlab "allbins" 
2017-06-14 00:47:30,342 INFO     quick_adcp   ---------------------------------------------

2017-06-14 00:47:30,342 INFO     quick_adcp   step 22: write "cruise_info.txt"