2016-03-23 05:56:32,204 INFO     quick_adcp   importing numpy version 1.8.1
2016-03-23 05:56:32,218 INFO     quick_adcp   importing matplotlib version 1.3.1
2016-03-23 05:56:32,409 INFO     quick_adcp   =====================================================
2016-03-23 05:56:32,410 INFO     quick_adcp   =====================================================
2016-03-23 05:56:32,410 INFO     quick_adcp   command line was: /home/currents/programs/uhdas/scripts/run_quick.py -d os150nb
2016-03-23 05:56:32,410 INFO     quick_adcp   cwd is /home/data/SKQ201603T/proc/os150nb
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2016-03-23 05:56:32,413 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,413 INFO     quick_adcp   step 1: set up files in "edit" directory 

2016-03-23 05:56:32,413 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,413 INFO     quick_adcp   step 2: scan files for time range

2016-03-23 05:56:32,425 INFO     quick_adcp   looking for database with adcpdb/a_skq*.blk
2016-03-23 05:56:32,425 INFO     quick_adcp   database found: listing blocks
2016-03-23 05:56:32,442 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,442 INFO     quick_adcp   step 3: generate averaged data...
2016-03-23 05:56:32,482 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,482 INFO     quick_adcp   step 4: load averaged data (to database)
2016-03-23 05:56:32,536 INFO     quick_adcp   database time range:
2016-03-23 05:56:32,536 INFO     quick_adcp   2016/03/22  15:16:24 to 2016/03/23  05:51:23
2016-03-23 05:56:32,536 INFO     quick_adcp   (81.636389 to 82.244016)
2016-03-23 05:56:32,550 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,550 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2016-03-23 05:56:32,551 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,551 INFO     quick_adcp   step 6: run setflags?

2016-03-23 05:56:32,565 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,565 INFO     quick_adcp   step 7: get navigation

2016-03-23 05:56:32,924 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,925 INFO     quick_adcp   step 8: list heading

2016-03-23 05:56:32,934 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:32,934 INFO     quick_adcp   step 9: plot heading correction

2016-03-23 05:56:33,281 INFO     quick_adcp   
-------------------------
2016-03-23 05:56:33,281 INFO     quick_adcp   ---- running navsteps ---
2016-03-23 05:56:33,281 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,281 INFO     quick_adcp   step 10: nav steps: run adcpsect
2016-03-23 05:56:33,281 INFO     quick_adcp   navstep 1
2016-03-23 05:56:33,294 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,294 INFO     quick_adcp   step 11: nav steps: run refabs
2016-03-23 05:56:33,294 INFO     quick_adcp   navstep 2
2016-03-23 05:56:33,306 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,306 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2016-03-23 05:56:33,306 INFO     quick_adcp   navstep 3
2016-03-23 05:56:33,330 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,330 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2016-03-23 05:56:33,331 INFO     quick_adcp   navstep 4
2016-03-23 05:56:33,357 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,357 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2016-03-23 05:56:33,358 INFO     quick_adcp   navstep 5
2016-03-23 05:56:33,698 INFO     quick_adcp   -------------------------
2016-03-23 05:56:33,698 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2016-03-23 05:56:33,698 INFO     quick_adcp   navstep 6
2016-03-23 05:56:34,020 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:34,020 INFO     quick_adcp   step 10: find profile flags 

2016-03-23 05:56:34,059 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:34,059 INFO     quick_adcp   step 11: apply editing 

2016-03-23 05:56:34,096 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:34,096 INFO     quick_adcp   step 12: run calibration steps 

2016-03-23 05:56:34,632 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:34,632 INFO     quick_adcp   step 13: extract and plot temperature 

2016-03-23 05:56:34,892 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:34,892 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2016-03-23 05:56:35,055 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:35,056 INFO     quick_adcp   step 15: extract matlab "allbins" 

2016-03-23 05:56:35,131 INFO     quick_adcp   ---------------------------------------------
2016-03-23 05:56:35,131 INFO     quick_adcp   writing "cruise_info.txt"