2015-03-17 15:35:01,982 INFO repeater task os75nb_quick starting 15.7 seconds late 2015-03-17 15:35:06,342 INFO repeater task os75nb_quick ended after 4.4 seconds 2015-03-17 15:35:06,343 INFO repeater task os75nb_3dayplots starting 20.1 seconds late 2015-03-17 15:35:11,603 INFO repeater task os75nb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 15:35:11,603 INFO repeater task os75nb_3dayplots ended after 5.3 seconds 2015-03-17 15:35:11,603 INFO repeater task os75nb_tsstats starting 25.3 seconds late 2015-03-17 15:35:12,570 INFO repeater task os75nb_tsstats ended after 1.0 seconds 2015-03-17 15:35:12,572 INFO repeater task os150nb_beamplots starting 26.3 seconds late 2015-03-17 15:35:13,043 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 15:35:13,044 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 15:35:13,044 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 15:35:13,045 INFO repeater task os150nb_beamplots starting 26.8 seconds late 2015-03-17 15:35:13,510 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 15:35:13,511 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 15:35:13,511 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 15:35:13,512 INFO repeater task os75bb_beamplots starting 27.3 seconds late 2015-03-17 15:35:15,152 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:35:15,153 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 15:35:15,153 INFO repeater task os75bb_beamplots starting 28.9 seconds late 2015-03-17 15:35:16,797 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:35:16,797 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 15:35:16,798 INFO repeater task os75nb_beamplots starting 30.5 seconds late 2015-03-17 15:35:18,443 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:35:18,443 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 15:35:18,444 INFO repeater task os75nb_beamplots starting 32.2 seconds late 2015-03-17 15:35:20,110 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:35:20,110 INFO repeater task os75nb_beamplots ended after 1.7 seconds 2015-03-17 15:35:20,111 INFO repeater task seapath_hcorrstats starting 33.8 seconds late 2015-03-17 15:35:21,195 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 15:35:21,197 INFO repeater task gyro2_hcorrstats starting 34.9 seconds late 2015-03-17 15:35:22,283 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 15:35:27,289 INFO repeater task os150nb_lastensq starting 1.0 seconds late 2015-03-17 15:35:27,976 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 15:35:27,977 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 15:35:27,977 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 15:35:27,978 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 15:35:27,980 INFO repeater task os75bb_lastensq starting 30.0 seconds late 2015-03-17 15:35:29,973 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 15:35:29,973 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:34:48 2015-03-17 15:38:50,603 INFO repeater task os150nb_10pings starting 4.4 seconds late 2015-03-17 15:38:50,796 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 15:38:50,797 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 15:38:50,797 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 15:38:50,800 INFO repeater task os75bb_10pings starting 4.5 seconds late 2015-03-17 15:38:51,006 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 15:38:51,009 INFO repeater task os75nb_10pings starting 4.8 seconds late 2015-03-17 15:38:51,203 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 15:39:46,382 INFO repeater task seapath_hcorrstats starting 0.1 seconds late 2015-03-17 15:39:47,493 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 15:39:47,494 INFO repeater task gyro2_hcorrstats starting 1.2 seconds late 2015-03-17 15:39:48,574 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 15:39:58,600 INFO repeater task os75bb_lastensq starting 0.6 seconds late 2015-03-17 15:40:00,458 INFO repeater task os75bb_lastensq ended after 1.9 seconds 2015-03-17 15:40:00,458 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:39:48 2015-03-17 15:40:00,459 INFO repeater task os75nb_lastensq starting 2.5 seconds late 2015-03-17 15:40:02,568 INFO repeater task os75nb_lastensq ended after 2.1 seconds 2015-03-17 15:40:02,568 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 15:39:48 2015-03-17 15:40:37,676 INFO repeater task os150nb_lastensq starting 1.4 seconds late 2015-03-17 15:40:38,349 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 15:40:38,350 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 15:40:38,350 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 15:40:38,350 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 15:44:09,008 INFO repeater task os150nb_10pings starting 2.8 seconds late 2015-03-17 15:44:09,197 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 15:44:09,198 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 15:44:09,198 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 15:44:09,201 INFO repeater task os75bb_10pings starting 2.9 seconds late 2015-03-17 15:44:09,392 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 15:44:09,395 INFO repeater task os75nb_10pings starting 3.1 seconds late 2015-03-17 15:44:09,591 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 15:44:49,721 INFO repeater task seapath_hcorrstats starting 3.4 seconds late 2015-03-17 15:44:50,787 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 15:44:50,788 INFO repeater task gyro2_hcorrstats starting 4.5 seconds late 2015-03-17 15:44:51,853 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 15:45:01,878 INFO repeater task os75bb_lastensq starting 3.9 seconds late 2015-03-17 15:45:03,882 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 15:45:03,883 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:44:48 2015-03-17 15:45:03,886 INFO repeater task os75nb_lastensq starting 5.9 seconds late 2015-03-17 15:45:05,713 INFO repeater task os75nb_lastensq ended after 1.8 seconds 2015-03-17 15:45:05,714 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 15:44:48 2015-03-17 15:45:50,851 INFO repeater task os150nb_lastensq starting 4.6 seconds late 2015-03-17 15:45:51,551 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 15:45:51,552 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 15:45:51,552 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 15:45:51,552 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 15:49:27,262 INFO repeater task os150nb_10pings starting 1.0 seconds late 2015-03-17 15:49:27,463 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 15:49:27,464 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 15:49:27,464 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 15:49:27,467 INFO repeater task os75bb_10pings starting 1.2 seconds late 2015-03-17 15:49:27,673 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 15:49:27,675 INFO repeater task os75nb_10pings starting 1.4 seconds late 2015-03-17 15:49:27,874 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 15:49:47,931 INFO repeater task os150nb_quick starting 1.7 seconds late 2015-03-17 15:49:48,429 ERROR repeater task os150nb_quick returncode 2 2015-03-17 15:49:48,430 INFO repeater task os150nb_quick output: Failure in: scanping Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 917, in run_calc Calc() File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 271, in __call__ gbinsonar= uhdas_cfg.gbinsonar) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range cannot run numpy scan Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1089, in quick_adcp proc.run_scanping_npy() #UHDAS data File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 935, in run_scanping_npy self.run_calc('scanping', **kw) File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 920, in run_calc raise quickFatalError('Q_npy.runcalc: %s failure ', calcname) quickFatalError: ('Q_npy.runcalc: %s failure ', 'scanping') running quick_adcp Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_quick.py", line 169, in quick_adcp(['--cntfile', cntfile_proc]) File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1104, in quick_adcp trddlist = proc.get_time_range(timefile, time_range_string) File "/home/currents/programs/pycurrents/adcp/quick_subs.py", line 147, in get_time_range TF = open(timefile,'r') IOError: [Errno 2] No such file or directory: 'scan/a_skq.scn' 2015-03-17 15:49:48,430 INFO repeater task os150nb_quick ended after 0.5 seconds 2015-03-17 15:49:48,430 INFO repeater task os150nb_3dayplots starting 2.2 seconds late 2015-03-17 15:49:48,880 ERROR repeater task os150nb_3dayplots returncode 1 2015-03-17 15:49:48,881 INFO repeater task os150nb_3dayplots output: cannot write codasdb data samples for daily_report Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 333, in save_data_sample_db(cid, '_cont', cruiseinfo.daily_dir, -1.2) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 133, in save_data_sample_db dinfo = get_dbinfo(cid, ndays) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 340, in dinfo = get_dbinfo(cid) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq 2015-03-17 15:49:48,881 INFO repeater task os150nb_3dayplots ended after 0.5 seconds 2015-03-17 15:49:48,882 INFO repeater task os150nb_tsstats starting 2.6 seconds late 2015-03-17 15:49:49,227 ERROR repeater task os150nb_tsstats returncode 1 2015-03-17 15:49:49,228 INFO repeater task os150nb_tsstats output: Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_plot_tsstats.py", line 97, in data = get_data(dbname, ndays=ndays) File "/home/currents/programs/pycurrents/adcp/tseries_diffstats.py", line 46, in get_data alldata=get_profiles(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 262, in get_profiles dbname = dbname_from_path(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 229, in dbname_from_path raise ValueError("path %s has no block directory" % path) ValueError: path /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq has no block directory 2015-03-17 15:49:49,228 INFO repeater task os150nb_tsstats ended after 0.3 seconds 2015-03-17 15:49:49,230 INFO repeater task os75bb_quick starting 3.0 seconds late 2015-03-17 15:49:52,866 INFO repeater task os75bb_quick ended after 3.6 seconds 2015-03-17 15:49:52,868 INFO repeater task os75bb_3dayplots starting 6.6 seconds late 2015-03-17 15:49:56,969 INFO repeater task os75bb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 15:49:56,969 INFO repeater task os75bb_3dayplots ended after 4.1 seconds 2015-03-17 15:49:56,970 INFO repeater task os75bb_tsstats starting 10.7 seconds late 2015-03-17 15:49:57,884 INFO repeater task os75bb_tsstats ended after 0.9 seconds 2015-03-17 15:49:57,886 INFO repeater task os75nb_quick starting 11.6 seconds late 2015-03-17 15:50:02,221 INFO repeater task os75nb_quick ended after 4.3 seconds 2015-03-17 15:50:02,221 INFO repeater task os75nb_3dayplots starting 16.0 seconds late 2015-03-17 15:50:07,098 INFO repeater task os75nb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 15:50:07,098 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2015-03-17 15:50:07,099 INFO repeater task os75nb_tsstats starting 20.8 seconds late 2015-03-17 15:50:08,079 INFO repeater task os75nb_tsstats ended after 1.0 seconds 2015-03-17 15:50:08,080 INFO repeater task os150nb_beamplots starting 21.8 seconds late 2015-03-17 15:50:08,549 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 15:50:08,549 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 15:50:08,549 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 15:50:08,550 INFO repeater task os150nb_beamplots starting 22.3 seconds late 2015-03-17 15:50:09,012 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 15:50:09,012 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 15:50:09,013 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 15:50:09,013 INFO repeater task os75bb_beamplots starting 22.8 seconds late 2015-03-17 15:50:10,646 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:50:10,647 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 15:50:10,647 INFO repeater task os75bb_beamplots starting 24.4 seconds late 2015-03-17 15:50:12,258 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:50:12,259 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 15:50:12,260 INFO repeater task os75nb_beamplots starting 26.0 seconds late 2015-03-17 15:50:13,752 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:50:13,752 INFO repeater task os75nb_beamplots ended after 1.5 seconds 2015-03-17 15:50:13,753 INFO repeater task os75nb_beamplots starting 27.5 seconds late 2015-03-17 15:50:15,374 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 15:50:15,375 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 15:50:15,376 INFO repeater task seapath_hcorrstats starting 29.1 seconds late 2015-03-17 15:50:16,369 INFO repeater task seapath_hcorrstats ended after 1.0 seconds 2015-03-17 15:50:16,370 INFO repeater task gyro2_hcorrstats starting 30.1 seconds late 2015-03-17 15:50:17,450 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 15:50:22,459 INFO repeater task os75bb_lastensq starting 24.5 seconds late 2015-03-17 15:50:24,443 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 15:50:24,444 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:49:48 2015-03-17 15:50:24,446 INFO repeater task os75nb_lastensq starting 26.4 seconds late 2015-03-17 15:50:26,444 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 15:50:26,445 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 15:49:48 2015-03-17 15:50:56,534 INFO repeater task os150nb_lastensq starting 0.3 seconds late 2015-03-17 15:50:57,213 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 15:50:57,214 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 15:50:57,214 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 15:50:57,215 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 15:54:47,954 INFO repeater task os150nb_10pings starting 1.7 seconds late 2015-03-17 15:54:48,148 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 15:54:48,149 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 15:54:48,149 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 15:54:48,157 INFO repeater task os75bb_10pings starting 1.9 seconds late 2015-03-17 15:54:48,353 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 15:54:48,355 INFO repeater task os75nb_10pings starting 2.1 seconds late 2015-03-17 15:54:48,553 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 15:54:48,558 INFO repeater task seapath_hcorrstats starting 2.3 seconds late 2015-03-17 15:54:49,668 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 15:54:49,669 INFO repeater task gyro2_hcorrstats starting 3.4 seconds late 2015-03-17 15:54:50,658 INFO repeater task gyro2_hcorrstats ended after 1.0 seconds 2015-03-17 15:55:00,683 INFO repeater task os75bb_lastensq starting 2.7 seconds late 2015-03-17 15:55:02,668 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 15:55:02,668 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:54:48 2015-03-17 15:55:02,670 INFO repeater task os75nb_lastensq starting 4.7 seconds late 2015-03-17 15:55:04,672 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 15:55:04,673 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 15:54:48 2015-03-17 15:56:09,873 INFO repeater task os150nb_lastensq starting 3.6 seconds late 2015-03-17 15:56:10,553 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 15:56:10,553 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 15:56:10,553 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 15:56:10,553 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 15:59:51,242 INFO repeater task seapath_hcorrstats starting 5.0 seconds late 2015-03-17 15:59:52,294 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 15:59:52,295 INFO repeater task gyro2_hcorrstats starting 6.0 seconds late 2015-03-17 15:59:53,343 INFO repeater task gyro2_hcorrstats ended after 1.0 seconds 2015-03-17 15:59:58,352 INFO repeater task os75bb_lastensq starting 0.4 seconds late 2015-03-17 16:00:00,335 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 16:00:00,336 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 15:59:48 2015-03-17 16:00:00,338 INFO repeater task os75nb_lastensq starting 2.3 seconds late 2015-03-17 16:00:02,233 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2015-03-17 16:00:02,234 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 15:59:48 2015-03-17 16:00:07,238 INFO repeater task os150nb_10pings starting 1.0 seconds late 2015-03-17 16:00:07,442 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:00:07,442 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:00:07,443 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:00:07,445 INFO repeater task os75bb_10pings starting 1.2 seconds late 2015-03-17 16:00:07,638 ERROR repeater task os75bb_10pings returncode 8 2015-03-17 16:00:07,638 INFO repeater task os75bb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1473, in extract_raw i0 = ii[i0] * nbytes IndexError: index out of bounds 2015-03-17 16:00:07,638 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:00:07,640 INFO repeater task os75nb_10pings starting 1.4 seconds late 2015-03-17 16:00:07,827 ERROR repeater task os75nb_10pings returncode 8 2015-03-17 16:00:07,827 INFO repeater task os75nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1473, in extract_raw i0 = ii[i0] * nbytes IndexError: index out of bounds 2015-03-17 16:00:07,827 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:01:18,040 INFO repeater task os150nb_lastensq starting 1.8 seconds late 2015-03-17 16:01:18,723 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:01:18,723 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:01:18,724 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:01:18,724 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:04:49,415 INFO repeater task os150nb_quick starting 3.2 seconds late 2015-03-17 16:04:49,892 ERROR repeater task os150nb_quick returncode 2 2015-03-17 16:04:49,892 INFO repeater task os150nb_quick output: Failure in: scanping Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 917, in run_calc Calc() File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 271, in __call__ gbinsonar= uhdas_cfg.gbinsonar) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range cannot run numpy scan Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1089, in quick_adcp proc.run_scanping_npy() #UHDAS data File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 935, in run_scanping_npy self.run_calc('scanping', **kw) File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 920, in run_calc raise quickFatalError('Q_npy.runcalc: %s failure ', calcname) quickFatalError: ('Q_npy.runcalc: %s failure ', 'scanping') running quick_adcp Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_quick.py", line 169, in quick_adcp(['--cntfile', cntfile_proc]) File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1104, in quick_adcp trddlist = proc.get_time_range(timefile, time_range_string) File "/home/currents/programs/pycurrents/adcp/quick_subs.py", line 147, in get_time_range TF = open(timefile,'r') IOError: [Errno 2] No such file or directory: 'scan/a_skq.scn' 2015-03-17 16:04:49,893 INFO repeater task os150nb_quick ended after 0.5 seconds 2015-03-17 16:04:49,893 INFO repeater task os150nb_3dayplots starting 3.6 seconds late 2015-03-17 16:04:50,331 ERROR repeater task os150nb_3dayplots returncode 1 2015-03-17 16:04:50,331 INFO repeater task os150nb_3dayplots output: cannot write codasdb data samples for daily_report Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 333, in save_data_sample_db(cid, '_cont', cruiseinfo.daily_dir, -1.2) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 133, in save_data_sample_db dinfo = get_dbinfo(cid, ndays) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 340, in dinfo = get_dbinfo(cid) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq 2015-03-17 16:04:50,331 INFO repeater task os150nb_3dayplots ended after 0.4 seconds 2015-03-17 16:04:50,332 INFO repeater task os150nb_tsstats starting 4.1 seconds late 2015-03-17 16:04:50,664 ERROR repeater task os150nb_tsstats returncode 1 2015-03-17 16:04:50,664 INFO repeater task os150nb_tsstats output: Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_plot_tsstats.py", line 97, in data = get_data(dbname, ndays=ndays) File "/home/currents/programs/pycurrents/adcp/tseries_diffstats.py", line 46, in get_data alldata=get_profiles(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 262, in get_profiles dbname = dbname_from_path(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 229, in dbname_from_path raise ValueError("path %s has no block directory" % path) ValueError: path /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq has no block directory 2015-03-17 16:04:50,664 INFO repeater task os150nb_tsstats ended after 0.3 seconds 2015-03-17 16:04:50,665 INFO repeater task os75bb_quick starting 4.4 seconds late 2015-03-17 16:04:54,286 INFO repeater task os75bb_quick ended after 3.6 seconds 2015-03-17 16:04:54,287 INFO repeater task os75bb_3dayplots starting 8.0 seconds late 2015-03-17 16:04:58,377 INFO repeater task os75bb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:04:58,378 INFO repeater task os75bb_3dayplots ended after 4.1 seconds 2015-03-17 16:04:58,379 INFO repeater task os75bb_tsstats starting 12.1 seconds late 2015-03-17 16:04:59,299 INFO repeater task os75bb_tsstats ended after 0.9 seconds 2015-03-17 16:04:59,300 INFO repeater task os75nb_lastensq starting 1.3 seconds late 2015-03-17 16:05:01,276 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:05:01,276 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:04:48 2015-03-17 16:05:01,277 INFO repeater task os75nb_quick starting 15.0 seconds late 2015-03-17 16:05:05,871 INFO repeater task os75nb_quick ended after 4.6 seconds 2015-03-17 16:05:05,872 INFO repeater task os75nb_3dayplots starting 19.6 seconds late 2015-03-17 16:05:11,245 INFO repeater task os75nb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:05:11,246 INFO repeater task os75nb_3dayplots ended after 5.4 seconds 2015-03-17 16:05:11,247 INFO repeater task os75nb_tsstats starting 25.0 seconds late 2015-03-17 16:05:12,126 INFO repeater task os75nb_tsstats ended after 0.9 seconds 2015-03-17 16:05:12,126 INFO repeater task os150nb_beamplots starting 25.9 seconds late 2015-03-17 16:05:12,566 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:05:12,567 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:05:12,567 INFO repeater task os150nb_beamplots ended after 0.4 seconds 2015-03-17 16:05:12,568 INFO repeater task os150nb_beamplots starting 26.3 seconds late 2015-03-17 16:05:13,036 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:05:13,037 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:05:13,037 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 16:05:13,037 INFO repeater task os75bb_beamplots starting 26.8 seconds late 2015-03-17 16:05:14,523 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:05:14,524 INFO repeater task os75bb_beamplots ended after 1.5 seconds 2015-03-17 16:05:14,524 INFO repeater task os75bb_beamplots starting 28.3 seconds late 2015-03-17 16:05:16,126 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:05:16,127 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 16:05:16,128 INFO repeater task os75nb_beamplots starting 29.9 seconds late 2015-03-17 16:05:17,758 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:05:17,759 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 16:05:17,759 INFO repeater task os75nb_beamplots starting 31.5 seconds late 2015-03-17 16:05:19,372 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:05:19,372 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 16:05:19,373 INFO repeater task seapath_hcorrstats starting 33.1 seconds late 2015-03-17 16:05:20,470 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:05:20,471 INFO repeater task gyro2_hcorrstats starting 34.2 seconds late 2015-03-17 16:05:21,509 INFO repeater task gyro2_hcorrstats ended after 1.0 seconds 2015-03-17 16:05:26,515 INFO repeater task os150nb_10pings starting 0.3 seconds late 2015-03-17 16:05:26,713 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:05:26,713 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:05:26,713 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:05:26,716 INFO repeater task os75bb_lastensq starting 28.7 seconds late 2015-03-17 16:05:28,592 INFO repeater task os75bb_lastensq ended after 1.9 seconds 2015-03-17 16:05:28,593 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:04:48 2015-03-17 16:05:28,593 INFO repeater task os75bb_10pings starting 2.3 seconds late 2015-03-17 16:05:28,788 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:05:28,789 INFO repeater task os75nb_10pings starting 2.5 seconds late 2015-03-17 16:05:28,986 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:06:29,169 INFO repeater task os150nb_lastensq starting 2.9 seconds late 2015-03-17 16:06:29,823 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:06:29,824 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:06:29,824 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:06:29,825 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:09:50,473 INFO repeater task seapath_hcorrstats starting 4.2 seconds late 2015-03-17 16:09:51,527 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:09:51,528 INFO repeater task gyro2_hcorrstats starting 5.3 seconds late 2015-03-17 16:09:52,602 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:10:02,623 INFO repeater task os75bb_lastensq starting 4.6 seconds late 2015-03-17 16:10:04,537 INFO repeater task os75bb_lastensq ended after 1.9 seconds 2015-03-17 16:10:04,538 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:09:48 2015-03-17 16:10:04,539 INFO repeater task os75nb_lastensq starting 6.5 seconds late 2015-03-17 16:10:06,502 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:10:06,503 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:09:48 2015-03-17 16:10:46,632 INFO repeater task os150nb_10pings starting 0.4 seconds late 2015-03-17 16:10:46,833 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:10:46,834 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:10:46,834 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:10:46,836 INFO repeater task os75bb_10pings starting 0.6 seconds late 2015-03-17 16:10:47,035 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:10:47,036 INFO repeater task os75nb_10pings starting 0.8 seconds late 2015-03-17 16:10:47,227 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:11:37,386 INFO repeater task os150nb_lastensq starting 1.1 seconds late 2015-03-17 16:11:38,007 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:11:38,007 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:11:38,008 INFO repeater task os150nb_lastensq ended after 0.6 seconds 2015-03-17 16:11:38,008 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:14:48,630 INFO repeater task seapath_hcorrstats starting 2.4 seconds late 2015-03-17 16:14:49,743 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:14:49,743 INFO repeater task gyro2_hcorrstats starting 3.5 seconds late 2015-03-17 16:14:50,812 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:15:00,836 INFO repeater task os75bb_lastensq starting 2.8 seconds late 2015-03-17 16:15:02,690 INFO repeater task os75bb_lastensq ended after 1.9 seconds 2015-03-17 16:15:02,691 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:14:48 2015-03-17 16:15:02,692 INFO repeater task os75nb_lastensq starting 4.7 seconds late 2015-03-17 16:15:04,677 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:15:04,677 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:14:48 2015-03-17 16:16:09,877 INFO repeater task os150nb_10pings starting 3.6 seconds late 2015-03-17 16:16:10,074 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:16:10,075 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:16:10,075 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:16:10,078 INFO repeater task os75bb_10pings starting 3.8 seconds late 2015-03-17 16:16:10,266 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:16:10,268 INFO repeater task os75nb_10pings starting 4.0 seconds late 2015-03-17 16:16:10,451 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:16:50,576 INFO repeater task os150nb_lastensq starting 4.3 seconds late 2015-03-17 16:16:51,267 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:16:51,268 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:16:51,268 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:16:51,268 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:19:46,831 INFO repeater task os150nb_quick starting 0.6 seconds late 2015-03-17 16:19:47,334 ERROR repeater task os150nb_quick returncode 2 2015-03-17 16:19:47,335 INFO repeater task os150nb_quick output: Failure in: scanping Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 917, in run_calc Calc() File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 271, in __call__ gbinsonar= uhdas_cfg.gbinsonar) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range cannot run numpy scan Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1089, in quick_adcp proc.run_scanping_npy() #UHDAS data File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 935, in run_scanping_npy self.run_calc('scanping', **kw) File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 920, in run_calc raise quickFatalError('Q_npy.runcalc: %s failure ', calcname) quickFatalError: ('Q_npy.runcalc: %s failure ', 'scanping') running quick_adcp Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_quick.py", line 169, in quick_adcp(['--cntfile', cntfile_proc]) File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1104, in quick_adcp trddlist = proc.get_time_range(timefile, time_range_string) File "/home/currents/programs/pycurrents/adcp/quick_subs.py", line 147, in get_time_range TF = open(timefile,'r') IOError: [Errno 2] No such file or directory: 'scan/a_skq.scn' 2015-03-17 16:19:47,335 INFO repeater task os150nb_quick ended after 0.5 seconds 2015-03-17 16:19:47,335 INFO repeater task os150nb_3dayplots starting 1.1 seconds late 2015-03-17 16:19:47,787 ERROR repeater task os150nb_3dayplots returncode 1 2015-03-17 16:19:47,788 INFO repeater task os150nb_3dayplots output: cannot write codasdb data samples for daily_report Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 333, in save_data_sample_db(cid, '_cont', cruiseinfo.daily_dir, -1.2) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 133, in save_data_sample_db dinfo = get_dbinfo(cid, ndays) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 340, in dinfo = get_dbinfo(cid) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq 2015-03-17 16:19:47,788 INFO repeater task os150nb_3dayplots ended after 0.5 seconds 2015-03-17 16:19:47,789 INFO repeater task os150nb_tsstats starting 1.5 seconds late 2015-03-17 16:19:48,131 ERROR repeater task os150nb_tsstats returncode 1 2015-03-17 16:19:48,131 INFO repeater task os150nb_tsstats output: Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_plot_tsstats.py", line 97, in data = get_data(dbname, ndays=ndays) File "/home/currents/programs/pycurrents/adcp/tseries_diffstats.py", line 46, in get_data alldata=get_profiles(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 262, in get_profiles dbname = dbname_from_path(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 229, in dbname_from_path raise ValueError("path %s has no block directory" % path) ValueError: path /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq has no block directory 2015-03-17 16:19:48,132 INFO repeater task os150nb_tsstats ended after 0.3 seconds 2015-03-17 16:19:48,133 INFO repeater task os75bb_quick starting 1.9 seconds late 2015-03-17 16:19:51,916 INFO repeater task os75bb_quick ended after 3.8 seconds 2015-03-17 16:19:51,916 INFO repeater task os75bb_3dayplots starting 5.7 seconds late 2015-03-17 16:19:55,988 INFO repeater task os75bb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:19:55,988 INFO repeater task os75bb_3dayplots ended after 4.1 seconds 2015-03-17 16:19:55,989 INFO repeater task os75bb_tsstats starting 9.7 seconds late 2015-03-17 16:19:56,847 INFO repeater task os75bb_tsstats ended after 0.9 seconds 2015-03-17 16:19:56,848 INFO repeater task os75nb_quick starting 10.6 seconds late 2015-03-17 16:20:01,417 INFO repeater task os75nb_quick ended after 4.6 seconds 2015-03-17 16:20:01,418 INFO repeater task os75nb_3dayplots starting 15.2 seconds late 2015-03-17 16:20:06,724 INFO repeater task os75nb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:20:06,724 INFO repeater task os75nb_3dayplots ended after 5.3 seconds 2015-03-17 16:20:06,725 INFO repeater task os75nb_tsstats starting 20.5 seconds late 2015-03-17 16:20:07,623 INFO repeater task os75nb_tsstats ended after 0.9 seconds 2015-03-17 16:20:07,624 INFO repeater task os150nb_beamplots starting 21.4 seconds late 2015-03-17 16:20:08,092 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:20:08,093 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:20:08,093 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 16:20:08,094 INFO repeater task os150nb_beamplots starting 21.8 seconds late 2015-03-17 16:20:08,566 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:20:08,567 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:20:08,567 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 16:20:08,568 INFO repeater task os75bb_beamplots starting 22.3 seconds late 2015-03-17 16:20:10,203 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:20:10,204 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 16:20:10,205 INFO repeater task os75bb_beamplots starting 23.9 seconds late 2015-03-17 16:20:11,733 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:20:11,733 INFO repeater task os75bb_beamplots ended after 1.5 seconds 2015-03-17 16:20:11,734 INFO repeater task os75nb_beamplots starting 25.5 seconds late 2015-03-17 16:20:13,361 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:20:13,361 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 16:20:13,362 INFO repeater task os75nb_beamplots starting 27.1 seconds late 2015-03-17 16:20:14,815 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:20:14,816 INFO repeater task os75nb_beamplots ended after 1.5 seconds 2015-03-17 16:20:14,816 INFO repeater task seapath_hcorrstats starting 28.5 seconds late 2015-03-17 16:20:15,823 INFO repeater task seapath_hcorrstats ended after 1.0 seconds 2015-03-17 16:20:15,824 INFO repeater task gyro2_hcorrstats starting 29.5 seconds late 2015-03-17 16:20:16,893 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:20:21,901 INFO repeater task os75bb_lastensq starting 23.9 seconds late 2015-03-17 16:20:23,852 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 16:20:23,853 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:19:48 2015-03-17 16:20:23,855 INFO repeater task os75nb_lastensq starting 25.9 seconds late 2015-03-17 16:20:25,730 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2015-03-17 16:20:25,730 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2015-03-17 16:20:25,731 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:19:48 2015-03-17 16:21:30,932 INFO repeater task os150nb_10pings starting 4.7 seconds late 2015-03-17 16:21:31,124 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:21:31,124 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:21:31,125 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:21:31,127 INFO repeater task os75bb_10pings starting 4.9 seconds late 2015-03-17 16:21:31,321 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:21:31,323 INFO repeater task os75nb_10pings starting 5.1 seconds late 2015-03-17 16:21:31,518 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:21:56,596 INFO repeater task os150nb_lastensq starting 0.3 seconds late 2015-03-17 16:21:57,267 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:21:57,267 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:21:57,268 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:21:57,268 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:24:47,803 INFO repeater task seapath_hcorrstats starting 1.5 seconds late 2015-03-17 16:24:48,932 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:24:48,933 INFO repeater task gyro2_hcorrstats starting 2.7 seconds late 2015-03-17 16:24:50,004 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:25:00,029 INFO repeater task os75bb_lastensq starting 2.0 seconds late 2015-03-17 16:25:01,953 INFO repeater task os75bb_lastensq ended after 1.9 seconds 2015-03-17 16:25:01,954 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:24:48 2015-03-17 16:25:01,955 INFO repeater task os75nb_lastensq starting 4.0 seconds late 2015-03-17 16:25:03,950 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:25:03,951 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:24:48 2015-03-17 16:26:49,261 INFO repeater task os150nb_10pings starting 3.0 seconds late 2015-03-17 16:26:49,461 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:26:49,461 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:26:49,461 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:26:49,463 INFO repeater task os75bb_10pings starting 3.2 seconds late 2015-03-17 16:26:49,658 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:26:49,660 INFO repeater task os75nb_10pings starting 3.4 seconds late 2015-03-17 16:26:49,853 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:27:09,915 INFO repeater task os150nb_lastensq starting 3.7 seconds late 2015-03-17 16:27:10,602 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:27:10,603 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:27:10,603 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:27:10,603 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:29:51,121 INFO repeater task seapath_hcorrstats starting 4.8 seconds late 2015-03-17 16:29:52,231 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:29:52,232 INFO repeater task gyro2_hcorrstats starting 6.0 seconds late 2015-03-17 16:29:53,308 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:29:58,317 INFO repeater task os75bb_lastensq starting 0.3 seconds late 2015-03-17 16:30:00,161 INFO repeater task os75bb_lastensq ended after 1.8 seconds 2015-03-17 16:30:00,161 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:29:48 2015-03-17 16:30:00,163 INFO repeater task os75nb_lastensq starting 2.2 seconds late 2015-03-17 16:30:02,164 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:30:02,164 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:29:48 2015-03-17 16:32:07,567 INFO repeater task os150nb_10pings starting 1.3 seconds late 2015-03-17 16:32:07,766 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:32:07,766 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:32:07,767 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:32:07,769 INFO repeater task os75bb_10pings starting 1.5 seconds late 2015-03-17 16:32:07,971 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:32:07,972 INFO repeater task os75nb_10pings starting 1.7 seconds late 2015-03-17 16:32:08,164 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:32:18,189 INFO repeater task os150nb_lastensq starting 1.9 seconds late 2015-03-17 16:32:18,858 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:32:18,859 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:32:18,859 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:32:18,859 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:34:49,347 INFO repeater task os150nb_quick starting 3.1 seconds late 2015-03-17 16:34:49,847 ERROR repeater task os150nb_quick returncode 2 2015-03-17 16:34:49,847 INFO repeater task os150nb_quick output: Failure in: scanping Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 917, in run_calc Calc() File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 271, in __call__ gbinsonar= uhdas_cfg.gbinsonar) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range cannot run numpy scan Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1089, in quick_adcp proc.run_scanping_npy() #UHDAS data File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 935, in run_scanping_npy self.run_calc('scanping', **kw) File "/home/currents/programs/pycurrents/adcp/quick_npy.py", line 920, in run_calc raise quickFatalError('Q_npy.runcalc: %s failure ', calcname) quickFatalError: ('Q_npy.runcalc: %s failure ', 'scanping') running quick_adcp Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_quick.py", line 169, in quick_adcp(['--cntfile', cntfile_proc]) File "/home/currents/programs/pycurrents/adcp/quick_adcp.py", line 1104, in quick_adcp trddlist = proc.get_time_range(timefile, time_range_string) File "/home/currents/programs/pycurrents/adcp/quick_subs.py", line 147, in get_time_range TF = open(timefile,'r') IOError: [Errno 2] No such file or directory: 'scan/a_skq.scn' 2015-03-17 16:34:49,848 INFO repeater task os150nb_quick ended after 0.5 seconds 2015-03-17 16:34:49,848 INFO repeater task os150nb_3dayplots starting 3.6 seconds late 2015-03-17 16:34:50,327 ERROR repeater task os150nb_3dayplots returncode 1 2015-03-17 16:34:50,328 INFO repeater task os150nb_3dayplots output: cannot write codasdb data samples for daily_report Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 333, in save_data_sample_db(cid, '_cont', cruiseinfo.daily_dir, -1.2) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 133, in save_data_sample_db dinfo = get_dbinfo(cid, ndays) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: open_block_dir IN DATABASE: 1 CODAS ERROR: UNABLE_TO_OPEN ACCESSING: BLOCK_DIR_FILE FROM FUNCTION: DBOPEN IN DATABASE: 1 Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 340, in dinfo = get_dbinfo(cid) File "/home/currents/programs/uhdas/scripts/run_3dayplots_mpl.py", line 202, in get_dbinfo cid['top_plotbin'][cid['procdirname']]) File "/home/currents/programs/pycurrents/adcp/quick_codas.py", line 16, in binmaxdepth db = DB(dbname) File "_codas.pyx", line 450, in _codas.DB.__init__ (codas/src/_codas.c:5632) IOError: Can't open database /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq 2015-03-17 16:34:50,328 INFO repeater task os150nb_3dayplots ended after 0.5 seconds 2015-03-17 16:34:50,329 INFO repeater task os150nb_tsstats starting 4.1 seconds late 2015-03-17 16:34:50,670 ERROR repeater task os150nb_tsstats returncode 1 2015-03-17 16:34:50,671 INFO repeater task os150nb_tsstats output: Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_plot_tsstats.py", line 97, in data = get_data(dbname, ndays=ndays) File "/home/currents/programs/pycurrents/adcp/tseries_diffstats.py", line 46, in get_data alldata=get_profiles(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 262, in get_profiles dbname = dbname_from_path(dbname) File "/home/currents/programs/pycurrents/codas/tools.py", line 229, in dbname_from_path raise ValueError("path %s has no block directory" % path) ValueError: path /home/data/SKQ201504T_01/proc/os150nb/adcpdb/a_skq has no block directory 2015-03-17 16:34:50,671 INFO repeater task os150nb_tsstats ended after 0.3 seconds 2015-03-17 16:34:50,673 INFO repeater task os75bb_quick starting 4.4 seconds late 2015-03-17 16:34:54,346 INFO repeater task os75bb_quick ended after 3.7 seconds 2015-03-17 16:34:54,348 INFO repeater task os75bb_3dayplots starting 8.1 seconds late 2015-03-17 16:34:58,420 INFO repeater task os75bb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:34:58,420 INFO repeater task os75bb_3dayplots ended after 4.1 seconds 2015-03-17 16:34:58,421 INFO repeater task os75bb_tsstats starting 12.2 seconds late 2015-03-17 16:34:59,295 INFO repeater task os75bb_tsstats ended after 0.9 seconds 2015-03-17 16:34:59,296 INFO repeater task os75nb_lastensq starting 1.3 seconds late 2015-03-17 16:35:01,136 INFO repeater task os75nb_lastensq ended after 1.8 seconds 2015-03-17 16:35:01,137 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:34:48 2015-03-17 16:35:01,137 INFO repeater task os75nb_quick starting 14.9 seconds late 2015-03-17 16:35:05,737 INFO repeater task os75nb_quick ended after 4.6 seconds 2015-03-17 16:35:05,737 INFO repeater task os75nb_3dayplots starting 19.5 seconds late 2015-03-17 16:35:10,582 INFO repeater task os75nb_3dayplots output: /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:319: RuntimeWarning: All-NaN slice encountered warnings.warn("All-NaN slice encountered", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/lib/nanfunctions.py:220: RuntimeWarning: All-NaN axis encountered warnings.warn("All-NaN axis encountered", RuntimeWarning) 2015-03-17 16:35:10,582 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2015-03-17 16:35:10,583 INFO repeater task os75nb_tsstats starting 24.3 seconds late 2015-03-17 16:35:11,495 INFO repeater task os75nb_tsstats ended after 0.9 seconds 2015-03-17 16:35:11,496 INFO repeater task os150nb_beamplots starting 25.2 seconds late 2015-03-17 16:35:11,977 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:35:11,978 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:35:11,978 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 16:35:11,979 INFO repeater task os150nb_beamplots starting 25.7 seconds late 2015-03-17 16:35:12,429 ERROR repeater task os150nb_beamplots returncode 1 2015-03-17 16:35:12,430 INFO repeater task os150nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/plot_beamdiagnostics.py", line 125, in savefigs=options.savefigs) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 298, in get_plot_recent data = self.read_data(minutes=minutes) File "/home/currents/programs/pycurrents/adcp/adcp_diagnostics.py", line 115, in read_data self.m=Multiread(self.lastfiles, self.sonar.model) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range 2015-03-17 16:35:12,430 INFO repeater task os150nb_beamplots ended after 0.5 seconds 2015-03-17 16:35:12,431 INFO repeater task os75bb_beamplots starting 26.2 seconds late 2015-03-17 16:35:13,922 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:35:13,923 INFO repeater task os75bb_beamplots ended after 1.5 seconds 2015-03-17 16:35:13,924 INFO repeater task os75bb_beamplots starting 27.7 seconds late 2015-03-17 16:35:15,527 INFO repeater task os75bb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:35:15,528 INFO repeater task os75bb_beamplots ended after 1.6 seconds 2015-03-17 16:35:15,529 INFO repeater task os75nb_beamplots starting 29.3 seconds late 2015-03-17 16:35:17,171 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:35:17,171 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 16:35:17,172 INFO repeater task os75nb_beamplots starting 30.9 seconds late 2015-03-17 16:35:18,768 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /home/currents/programs/uhdas/scripts CURRENTS_REPO_PATH not found; assuming in-place installation programs_path is /home/currents/programs 2015-03-17 16:35:18,769 INFO repeater task os75nb_beamplots ended after 1.6 seconds 2015-03-17 16:35:18,769 INFO repeater task seapath_hcorrstats starting 32.5 seconds late 2015-03-17 16:35:19,888 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:35:19,889 INFO repeater task gyro2_hcorrstats starting 33.6 seconds late 2015-03-17 16:35:20,862 INFO repeater task gyro2_hcorrstats ended after 1.0 seconds 2015-03-17 16:35:25,870 INFO repeater task os75bb_lastensq starting 27.9 seconds late 2015-03-17 16:35:27,891 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 16:35:27,891 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:34:48 2015-03-17 16:37:28,252 INFO repeater task os150nb_lastensq starting 2.0 seconds late 2015-03-17 16:37:28,925 ERROR repeater task os150nb_lastensq returncode 16 2015-03-17 16:37:28,926 INFO repeater task os150nb_lastensq output: Pingavg.read_inputs: no data available? Traceback (most recent call last): File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 600, in run self.read_inputs() File "/home/currents/programs/pycurrents/adcp/pingavg.py", line 565, in read_inputs yearbase=self.yearbase) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1645, in __init__ if os.path.exists(_log_fnames[0]): IndexError: list index out of range In body of run_lastensq.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_lastensq.py", line 338, in cdict = {'beamangle': pavg.beam_angle, AttributeError: 'Pingavg' object has no attribute 'beam_angle' 2015-03-17 16:37:28,926 INFO repeater task os150nb_lastensq ended after 0.7 seconds 2015-03-17 16:37:28,926 WARNING repeater task os150nb_lastensq: Could not stat or read /home/data/SKQ201504T_01/proc/os150nb/load/wrote_ens_time 2015-03-17 16:37:28,927 INFO repeater task os150nb_10pings starting 2.7 seconds late 2015-03-17 16:37:29,127 ERROR repeater task os150nb_10pings returncode 8 2015-03-17 16:37:29,128 INFO repeater task os150nb_10pings output: In body of run_grab_lastpings.py Traceback (most recent call last): File "/home/currents/programs/uhdas/scripts/run_grab_lastpings.py", line 69, in data=extract_raw(infile, instname[:2], i0, i1, outfile=outfile, verbose=True) File "/home/currents/programs/pycurrents/adcp/rdiraw.py", line 1471, in extract_raw log.info("%s has %d profiles of %d bytes each" % (infile, rf.nprofs, nbytes)) TypeError: %d format: a number is required, not NoneType 2015-03-17 16:37:29,128 INFO repeater task os150nb_10pings ended after 0.2 seconds 2015-03-17 16:37:29,131 INFO repeater task os75bb_10pings starting 2.9 seconds late 2015-03-17 16:37:29,333 INFO repeater task os75bb_10pings ended after 0.2 seconds 2015-03-17 16:37:29,335 INFO repeater task os75nb_10pings starting 3.1 seconds late 2015-03-17 16:37:29,535 INFO repeater task os75nb_10pings ended after 0.2 seconds 2015-03-17 16:39:49,983 INFO repeater task seapath_hcorrstats starting 3.7 seconds late 2015-03-17 16:39:51,080 INFO repeater task seapath_hcorrstats ended after 1.1 seconds 2015-03-17 16:39:51,080 INFO repeater task gyro2_hcorrstats starting 4.8 seconds late 2015-03-17 16:39:52,177 INFO repeater task gyro2_hcorrstats ended after 1.1 seconds 2015-03-17 16:40:02,198 INFO repeater task os75bb_lastensq starting 4.2 seconds late 2015-03-17 16:40:04,221 INFO repeater task os75bb_lastensq ended after 2.0 seconds 2015-03-17 16:40:04,221 INFO repeater task os75bb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75bb/load/wrote_ens_time: 2015/03/17 16:39:48 2015-03-17 16:40:04,223 INFO repeater task os75nb_lastensq starting 6.2 seconds late 2015-03-17 16:40:06,216 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2015-03-17 16:40:06,216 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2015-03-17 16:40:06,216 INFO repeater task os75nb_lastensq: Time from /home/data/SKQ201504T_01/proc/os75nb/load/wrote_ens_time: 2015/03/17 16:39:48 2015-03-17 16:40:23,175 INFO Translate translate exiting, gps_sea /home/data/SKQ201504T_01/rbin/seapath 2015-03-17 16:40:23,182 INFO Translate translate exiting, gps /home/data/SKQ201504T_01/rbin/cnav 2015-03-17 16:40:23,194 INFO Translate translate exiting, hdg /home/data/SKQ201504T_01/rbin/seapath 2015-03-17 16:40:23,198 INFO Translate translate exiting, sea /home/data/SKQ201504T_01/rbin/seapath 2015-03-17 16:40:23,199 INFO Translate translate exiting, hdg /home/data/SKQ201504T_01/rbin/gyro2 2015-03-17 16:40:23,207 INFO Translate translate exiting, hdg /home/data/SKQ201504T_01/rbin/gyro1 2015-03-17 16:40:26,271 INFO root cleanup_figs not_logging 2015-03-17 16:40:26,293 INFO root Exiting DAS_while_logging.py