2015-03-17 16:35:01,381 INFO     quick_adcp   importing numpy version 1.8.1
2015-03-17 16:35:01,395 INFO     quick_adcp   importing matplotlib version 1.3.1
2015-03-17 16:35:01,590 INFO     quick_adcp   =====================================================
2015-03-17 16:35:01,590 INFO     quick_adcp   =====================================================
2015-03-17 16:35:01,590 INFO     quick_adcp   command line was: /home/currents/programs/uhdas/scripts/run_quick.py -d os75nb
2015-03-17 16:35:01,590 INFO     quick_adcp   cwd is /home/data/SKQ201504T_01/proc/os75nb
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2015-03-17 16:35:01,599 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,599 INFO     quick_adcp   step 1: set up files in "edit" directory 

2015-03-17 16:35:01,599 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,599 INFO     quick_adcp   step 2: scan files for time range

2015-03-17 16:35:01,666 INFO     quick_adcp   looking for database with adcpdb/a_skq*.blk
2015-03-17 16:35:01,667 INFO     quick_adcp   database found: listing blocks
2015-03-17 16:35:01,681 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,681 INFO     quick_adcp   step 3: generate averaged data...
2015-03-17 16:35:01,723 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,723 INFO     quick_adcp   step 4: load averaged data (to database)
2015-03-17 16:35:01,805 INFO     quick_adcp   database time range:
2015-03-17 16:35:01,805 INFO     quick_adcp   2015/03/14  00:24:13 to 2015/03/17  16:34:46
2015-03-17 16:35:01,805 INFO     quick_adcp   (72.016817 to 75.690810)
2015-03-17 16:35:01,823 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,824 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2015-03-17 16:35:01,824 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,824 INFO     quick_adcp   step 6: run setflags?

2015-03-17 16:35:01,845 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:01,845 INFO     quick_adcp   step 7: get navigation

2015-03-17 16:35:02,245 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:02,245 INFO     quick_adcp   step 8: list heading

2015-03-17 16:35:02,260 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:02,260 INFO     quick_adcp   step 9: plot heading correction

2015-03-17 16:35:02,635 INFO     quick_adcp   
-------------------------
2015-03-17 16:35:02,635 INFO     quick_adcp   ---- running navsteps ---
2015-03-17 16:35:02,635 INFO     quick_adcp   -------------------------
2015-03-17 16:35:02,635 INFO     quick_adcp   step 10: nav steps: run adcpsect
2015-03-17 16:35:02,635 INFO     quick_adcp   navstep 1
2015-03-17 16:35:02,664 INFO     quick_adcp   -------------------------
2015-03-17 16:35:02,664 INFO     quick_adcp   step 11: nav steps: run refabs
2015-03-17 16:35:02,664 INFO     quick_adcp   navstep 2
2015-03-17 16:35:02,681 INFO     quick_adcp   -------------------------
2015-03-17 16:35:02,681 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2015-03-17 16:35:02,681 INFO     quick_adcp   navstep 3
2015-03-17 16:35:02,735 INFO     quick_adcp   -------------------------
2015-03-17 16:35:02,735 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2015-03-17 16:35:02,735 INFO     quick_adcp   navstep 4
2015-03-17 16:35:02,814 INFO     quick_adcp   -------------------------
2015-03-17 16:35:02,814 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2015-03-17 16:35:02,814 INFO     quick_adcp   navstep 5
2015-03-17 16:35:03,176 INFO     quick_adcp   -------------------------
2015-03-17 16:35:03,176 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2015-03-17 16:35:03,176 INFO     quick_adcp   navstep 6
2015-03-17 16:35:03,866 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:03,866 INFO     quick_adcp   step 10: find profile flags 

2015-03-17 16:35:03,956 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:03,957 INFO     quick_adcp   step 11: apply editing 

2015-03-17 16:35:04,012 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:04,013 INFO     quick_adcp   step 12: run calibration steps 

2015-03-17 16:35:04,906 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:04,906 INFO     quick_adcp   step 13: extract and plot temperature 

2015-03-17 16:35:05,192 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:05,192 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2015-03-17 16:35:05,375 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:05,375 INFO     quick_adcp   step 15: extract matlab "allbins" 

2015-03-17 16:35:05,560 INFO     quick_adcp   ---------------------------------------------
2015-03-17 16:35:05,560 INFO     quick_adcp   writing "cruise_info.txt"