2012-09-05 19:09:30,251 DEBUG root about to write control file parameters to --yearbase 2012 --cruisename RR1210 --configtype python --sonar nb150 --dbname a_rr --datatype uhdas --cfgpath /home/data/RR1210/proc/nb150/config --ens_len 300 #--update_gbin ## python gbins: run by "run_lastensq.py" at sea --skip_avg ## see above --max_search_depth 500 --proc_engine python --incremental --find_pflags --hidedisplay --top_plotbin 1 --auto 2012-09-05 19:09:30,252 DEBUG quick_adcp sys.argv = /home/currents/programs/uhdas/scripts/run_quick.py -d nb150 2012-09-05 19:09:30,252 DEBUG quick_adcp progdir = /home/currents/programs 2012-09-05 19:09:30,252 DEBUG quick_adcp binos = lnx64 2012-09-05 19:09:30,254 DEBUG quick_setup found cruise_info.hcorr (ashtech, adu, 0) 2012-09-05 19:09:30,254 INFO quick_adcp importing numpy 2012-09-05 19:09:30,267 INFO quick_adcp importing matplotlib 2012-09-05 19:09:30,412 DEBUG quick_mpl in Q_mpl 2012-09-05 19:09:30,413 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ aflagit_setup as_cont as_nav as_vect asetup catnav check_beamangle check_dbinfo check_headcorr check_opts check_uhdascfg ddtime def_qlist del_overlapping fill_thisload_timerange get_asvars get_cmd_timerange get_filelist get_nodb_times get_time_range getmat ldcodas listblocks llgrid loadping lst_btrk lst_conf lst_hdg lst_temp mpltest norotate opts plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp_mpl plotwtcal_mpl putnav refabs refabsbt rotate rotated run_adcpsect run_applyedit run_autoedit_npy run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_guess_xducerxy run_guess_xducerxy_npy run_loaddb run_loadlta_npy run_loadping run_lstconfig run_lsthdg run_lsttemp run_matbincmd run_matfiles run_pingavg_npy run_plotter run_putnav run_py_codaseditsetup run_py_findpflags run_py_pingeditsetup run_pybincmd_lta run_pybincmd_uhdas run_pygbin_npy run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scanbin_npy run_scandata run_scanlta_npy run_scanping_npy run_setflags run_smoothr run_updategbin run_updatepygbin run_xducerxy run_xducerxy_npy scanping setflags smoothr timegrid timslip ubprint user_defined_headfunc write_codas_editdefaults write_ping_editdefaults write_timerange_file zapsetup 2012-09-05 19:09:30,413 DEBUG quick_adcp cwd is /home/data/RR1210/proc/nb150 about to run these steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2012-09-05 19:09:30,413 DEBUG quick_adcp original fix file is a_rr.gps 2012-09-05 19:09:30,413 DEBUG quick_adcp smoothed nav file is a_rr_refsm.asc 2012-09-05 19:09:30,413 DEBUG quick_asect extracting matlab files for nb150, nb pings 2012-09-05 19:09:30,418 DEBUG quick_subs found 69 files using wildcard expansion from "/home/data/RR1210/raw/nb150/*.raw" 2012-09-05 19:09:30,418 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR1210/raw/nb150/rr2012_243_08663.raw ... 2012-09-05 19:09:30,419 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR1210/raw/nb150/rr2012_243_08663.raw ... 2012-09-05 19:09:30,419 DEBUG quick_adcp Wed Sep 5 19:09:30 2012 running quick_adcp.py as follows: --cntfile /home/data/RR1210/proc/nb150/nb150_qpy.cnt ----- adcpsect variables ------ cbasename contour dbname a_rr dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375] firstdepth 21 gridnum 80 increment 5 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2012 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ adjust_time 1 auto True beamangle 30 best_loggerdday_name unix_dday best_utcdday_name dday bindir /home/currents/programs/codas3/bin/lnx64 binos lnx64 btrk_step 1 cfgpath /home/data/RR1210/proc/nb150/config cntfile /home/data/RR1210/proc/nb150/nb150_qpy.cnt commands None configtype python cruisename RR1210 data_def vmadcp.def datadir /home/data/RR1210/raw/nb150 datafile_glob *.raw datatype uhdas dbname a_rr dday_bailout None debug False diarystr diary quick_adcp.diary displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth None editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/RR1210/raw/nb150/rr2012_243_08663.raw', '/home/data/RR1210/raw/nb150/rr2012_243_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_243_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_243_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_243_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_243_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_243_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_243_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_243_64800.raw', '/home/data/RR1210/raw/nb150/rr2012_243_72000.raw', '/home/data/RR1210/raw/nb150/rr2012_243_79200.raw', '/home/data/RR1210/raw/nb150/rr2012_244_00000.raw', '/home/data/RR1210/raw/nb150/rr2012_244_07200.raw', '/home/data/RR1210/raw/nb150/rr2012_244_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_244_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_244_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_244_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_244_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_244_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_244_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_244_64800.raw', '/home/data/RR1210/raw/nb150/rr2012_244_72000.raw', '/home/data/RR1210/raw/nb150/rr2012_244_79200.raw', '/home/data/RR1210/raw/nb150/rr2012_245_00000.raw', '/home/data/RR1210/raw/nb150/rr2012_245_07200.raw', '/home/data/RR1210/raw/nb150/rr2012_245_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_245_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_245_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_245_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_245_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_245_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_245_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_245_64800.raw', '/home/data/RR1210/raw/nb150/rr2012_245_72000.raw', '/home/data/RR1210/raw/nb150/rr2012_245_79200.raw', '/home/data/RR1210/raw/nb150/rr2012_246_00000.raw', '/home/data/RR1210/raw/nb150/rr2012_246_07200.raw', '/home/data/RR1210/raw/nb150/rr2012_246_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_246_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_246_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_246_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_246_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_246_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_246_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_246_64800.raw', '/home/data/RR1210/raw/nb150/rr2012_246_72000.raw', '/home/data/RR1210/raw/nb150/rr2012_246_79200.raw', '/home/data/RR1210/raw/nb150/rr2012_247_00000.raw', '/home/data/RR1210/raw/nb150/rr2012_247_07200.raw', '/home/data/RR1210/raw/nb150/rr2012_247_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_247_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_247_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_247_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_247_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_247_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_247_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_247_64800.raw', '/home/data/RR1210/raw/nb150/rr2012_247_72000.raw', '/home/data/RR1210/raw/nb150/rr2012_247_79200.raw', '/home/data/RR1210/raw/nb150/rr2012_248_00000.raw', '/home/data/RR1210/raw/nb150/rr2012_248_07200.raw', '/home/data/RR1210/raw/nb150/rr2012_248_14400.raw', '/home/data/RR1210/raw/nb150/rr2012_248_21600.raw', '/home/data/RR1210/raw/nb150/rr2012_248_28800.raw', '/home/data/RR1210/raw/nb150/rr2012_248_36000.raw', '/home/data/RR1210/raw/nb150/rr2012_248_43200.raw', '/home/data/RR1210/raw/nb150/rr2012_248_50400.raw', '/home/data/RR1210/raw/nb150/rr2012_248_57600.raw', '/home/data/RR1210/raw/nb150/rr2012_248_64800.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 21 fixfile a_rr.gps frequency 150 gbin_style python gbindirbase /home/data/RR1210/gbin hcorr_inst ashtech help False hidedisplay True incremental True instname nb150 jitter 15 max_BLKprofiles 399 max_search_depth 500 maxrunsecs None min_filter_fraction 0.5 model nb nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_rr.gps overview False pgmin 50 ping_headcorr False pingtype nb post_headcorr None printformats png proc_engine python proc_yearbase 2012 progdir /home/currents/programs py_gbindirbase /home/data/RR1210/gbin quiet False rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 setup_info False skip_avg True smfile a_rr_refsm.asc sonar nb150 steps2rerun timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False vardoc False varvals False wtrk_step 7 xducer_dx None xducer_dy None yearbase 2012 configured to run the following steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2012-09-05 19:09:30,419 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2012-09-05 19:09:30,419 DEBUG quick_run executing commands from /home/data/RR1210/proc/nb150/edit 2012-09-05 19:09:30,419 DEBUG quick_run setup.m exists. not replacing 2012-09-05 19:09:30,420 DEBUG quick_run asetup.m exists. not replacing 2012-09-05 19:09:30,420 DEBUG quick_run aflagit_setup.m exists. not replacing 2012-09-05 19:09:30,420 DEBUG quick_adcp about to run numpy scan, requiring python gbins 2012-09-05 19:09:30,420 DEBUG quick_npy Starting: scanping 2012-09-05 19:09:30,458 DEBUG quick_npy Ending: scanping 2012-09-05 19:09:30,459 DEBUG quick_subs start_end_time 2012/08/31 02:24:25 to 2012/08/31 02:34:35 2012-09-05 19:09:30,459 DEBUG quick_subs dd0: 243.100289 dd1: 243.107350 2012-09-05 19:09:30,459 DEBUG quick_adcp in quick_adcp.py: after scan; look for database times in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,460 DEBUG quick_adcp looking for database with adcpdb/a_rr*.blk 2012-09-05 19:09:30,460 DEBUG quick_adcp database found: listing blocks 2012-09-05 19:09:30,460 DEBUG quick_subs removing a_rrdir.blk 2012-09-05 19:09:30,460 DEBUG quick_subs about to run mkblkdir 2012-09-05 19:09:30,460 DEBUG quick_subs database still exists; rerunning mkdirblk 2012-09-05 19:09:30,460 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx64/mkblkdir mkblkdir.tmp 2012-09-05 19:09:30,468 DEBUG quick_subs database passes. 2012-09-05 19:09:30,469 DEBUG quick_subs start_end_time 2012/08/31 02:29:24 to 2012/09/05 18:49:24 2012-09-05 19:09:30,469 DEBUG quick_subs dd0: 243.103750 dd1: 248.784306 2012-09-05 19:09:30,469 DEBUG quick_adcp in quick_adcp.py before load, just looked for database times 2012-09-05 19:09:30,469 DEBUG quick_adcp origdb_time_range is 2012/08/31 02:29:24 to 2012/09/05 18:49:24 2012-09-05 19:09:30,469 DEBUG quick_adcp (243.103750 to 248.784306) 2012-09-05 19:09:30,469 DEBUG quick_run file load/ping_editparams.txt exists. not replacing 2012-09-05 19:09:30,470 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,470 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/load 2012-09-05 19:09:30,470 DEBUG quick_setup running python command "run_pingavg_npy" 2012-09-05 19:09:30,470 DEBUG quick_npy Starting: pingavg 2012-09-05 19:09:30,471 DEBUG quick_npy singleping editing parameters: 2012-09-05 19:09:30,472 DEBUG quick_npy bigtarget_mab_window : 11 2012-09-05 19:09:30,472 DEBUG quick_npy rl_endbin : 20 2012-09-05 19:09:30,472 DEBUG quick_npy max_search_depth : 500 2012-09-05 19:09:30,472 DEBUG quick_npy cor_cutoff : 120 2012-09-05 19:09:30,472 DEBUG quick_npy ampfilt : 40 2012-09-05 19:09:30,472 DEBUG quick_npy bigtarget_lgb_margin : 0.500000 2012-09-05 19:09:30,472 DEBUG quick_npy rl_startbin : 2 2012-09-05 19:09:30,472 DEBUG quick_npy ecutoff : 0.500000 2012-09-05 19:09:30,472 DEBUG quick_npy refavg_valcutoff : 1 2012-09-05 19:09:30,472 DEBUG quick_npy weakprof_percent : 30 2012-09-05 19:09:30,472 DEBUG quick_npy bigtarget_ampthresh : 55 2012-09-05 19:09:30,476 INFO pingavg Pingavg.run for time range 248.750005 to 248.794855 2012-09-05 19:09:30,481 DEBUG pingavg Chunk 1 of 1, 248.750005 to 248.794855 2012-09-05 19:09:30,481 DEBUG pingavg Nothing written 2012-09-05 19:09:30,481 DEBUG quick_npy wrote 0 averages 2012-09-05 19:09:30,481 DEBUG quick_npy Ending: pingavg 2012-09-05 19:09:30,482 DEBUG quick_subs in del_overlapping 2012-09-05 19:09:30,482 DEBUG quick_subs lastblock: 2012-09-05 19:09:30,482 DEBUG quick_subs 6 2012-09-05 19:09:30,482 DEBUG quick_subs lastcmd: 2012-09-05 19:09:30,482 DEBUG quick_subs 6 2012-09-05 19:09:30,482 DEBUG quick_subs delblks: 2012-09-05 19:09:30,482 DEBUG quick_subs [6] 2012-09-05 19:09:30,482 DEBUG quick_subs loadblks: 2012-09-05 19:09:30,482 DEBUG quick_subs [6] 2012-09-05 19:09:30,483 DEBUG quick_subs about to run mkblkdir 2012-09-05 19:09:30,483 DEBUG quick_subs database still exists; rerunning mkdirblk 2012-09-05 19:09:30,483 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx64/mkblkdir mkblkdir.tmp 2012-09-05 19:09:30,491 DEBUG quick_subs database passes. 2012-09-05 19:09:30,491 DEBUG quick_subs start_end_time 2012/08/31 02:29:24 to 2012/09/05 07:24:24 2012-09-05 19:09:30,491 DEBUG quick_subs dd0: 243.103750 dd1: 248.308611 2012-09-05 19:09:30,492 DEBUG quick_run [6] 2012-09-05 19:09:30,492 DEBUG quick_run cmdlist 2012-09-05 19:09:30,492 DEBUG quick_run ['./ens_blk006.cmd'] 2012-09-05 19:09:30,493 INFO quick_run Warning: 1 files will be loaded; 6 already exist 2012-09-05 19:09:30,493 INFO quick_run Wed Sep 5 19:09:30 2012 2012-09-05 19:09:30,493 INFO quick_run about to load uhdas files 2012-09-05 19:09:30,493 INFO quick_run /home/data/RR1210/raw/nb150/rr2012_243_08663.raw /home/data/RR1210/raw/nb150/rr2012_243_14400.raw /home/data/RR1210/raw/nb150/rr2012_243_21600.raw /home/data/RR1210/raw/nb150/rr2012_243_28800.raw /home/data/RR1210/raw/nb150/rr2012_243_36000.raw /home/data/RR1210/raw/nb150/rr2012_243_43200.raw /home/data/RR1210/raw/nb150/rr2012_243_50400.raw /home/data/RR1210/raw/nb150/rr2012_243_57600.raw /home/data/RR1210/raw/nb150/rr2012_243_64800.raw /home/data/RR1210/raw/nb150/rr2012_243_72000.raw /home/data/RR1210/raw/nb150/rr2012_243_79200.raw /home/data/RR1210/raw/nb150/rr2012_244_00000.raw /home/data/RR1210/raw/nb150/rr2012_244_07200.raw /home/data/RR1210/raw/nb150/rr2012_244_14400.raw /home/data/RR1210/raw/nb150/rr2012_244_21600.raw /home/data/RR1210/raw/nb150/rr2012_244_28800.raw /home/data/RR1210/raw/nb150/rr2012_244_36000.raw /home/data/RR1210/raw/nb150/rr2012_244_43200.raw /home/data/RR1210/raw/nb150/rr2012_244_50400.raw /home/data/RR1210/raw/nb150/rr2012_244_57600.raw /home/data/RR1210/raw/nb150/rr2012_244_64800.raw /home/data/RR1210/raw/nb150/rr2012_244_72000.raw /home/data/RR1210/raw/nb150/rr2012_244_79200.raw /home/data/RR1210/raw/nb150/rr2012_245_00000.raw /home/data/RR1210/raw/nb150/rr2012_245_07200.raw /home/data/RR1210/raw/nb150/rr2012_245_14400.raw /home/data/RR1210/raw/nb150/rr2012_245_21600.raw /home/data/RR1210/raw/nb150/rr2012_245_28800.raw /home/data/RR1210/raw/nb150/rr2012_245_36000.raw /home/data/RR1210/raw/nb150/rr2012_245_43200.raw /home/data/RR1210/raw/nb150/rr2012_245_50400.raw /home/data/RR1210/raw/nb150/rr2012_245_57600.raw /home/data/RR1210/raw/nb150/rr2012_245_64800.raw /home/data/RR1210/raw/nb150/rr2012_245_72000.raw /home/data/RR1210/raw/nb150/rr2012_245_79200.raw /home/data/RR1210/raw/nb150/rr2012_246_00000.raw /home/data/RR1210/raw/nb150/rr2012_246_07200.raw /home/data/RR1210/raw/nb150/rr2012_246_14400.raw /home/data/RR1210/raw/nb150/rr2012_246_21600.raw /home/data/RR1210/raw/nb150/rr2012_246_28800.raw /home/data/RR1210/raw/nb150/rr2012_246_36000.raw /home/data/RR1210/raw/nb150/rr2012_246_43200.raw /home/data/RR1210/raw/nb150/rr2012_246_50400.raw /home/data/RR1210/raw/nb150/rr2012_246_57600.raw /home/data/RR1210/raw/nb150/rr2012_246_64800.raw /home/data/RR1210/raw/nb150/rr2012_246_72000.raw /home/data/RR1210/raw/nb150/rr2012_246_79200.raw /home/data/RR1210/raw/nb150/rr2012_247_00000.raw /home/data/RR1210/raw/nb150/rr2012_247_07200.raw /home/data/RR1210/raw/nb150/rr2012_247_14400.raw /home/data/RR1210/raw/nb150/rr2012_247_21600.raw /home/data/RR1210/raw/nb150/rr2012_247_28800.raw /home/data/RR1210/raw/nb150/rr2012_247_36000.raw /home/data/RR1210/raw/nb150/rr2012_247_43200.raw /home/data/RR1210/raw/nb150/rr2012_247_50400.raw /home/data/RR1210/raw/nb150/rr2012_247_57600.raw /home/data/RR1210/raw/nb150/rr2012_247_64800.raw /home/data/RR1210/raw/nb150/rr2012_247_72000.raw /home/data/RR1210/raw/nb150/rr2012_247_79200.raw /home/data/RR1210/raw/nb150/rr2012_248_00000.raw /home/data/RR1210/raw/nb150/rr2012_248_07200.raw /home/data/RR1210/raw/nb150/rr2012_248_14400.raw /home/data/RR1210/raw/nb150/rr2012_248_21600.raw /home/data/RR1210/raw/nb150/rr2012_248_28800.raw /home/data/RR1210/raw/nb150/rr2012_248_36000.raw /home/data/RR1210/raw/nb150/rr2012_248_43200.raw /home/data/RR1210/raw/nb150/rr2012_248_50400.raw /home/data/RR1210/raw/nb150/rr2012_248_57600.raw /home/data/RR1210/raw/nb150/rr2012_248_64800.raw 2012-09-05 19:09:30,493 DEBUG quick_setup load/ldcodas.tmp exists 2012-09-05 19:09:30,493 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,494 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/load 2012-09-05 19:09:30,494 DEBUG quick_setup running python command "ldcodas" 2012-09-05 19:09:30,494 DEBUG quick_subs filling "thisload" timerange 2012-09-05 19:09:30,495 DEBUG quick_subs in ldcodas 2012-09-05 19:09:30,495 DEBUG quick_subs cmdlist: 2012-09-05 19:09:30,495 DEBUG quick_subs ['./ens_blk006.cmd'] 2012-09-05 19:09:30,495 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_rr DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2012 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk006.cmd 2012-09-05 19:09:30,495 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/ldcodas ldcodas.tmp 2012-09-05 19:09:30,514 DEBUG quick_subs removing a_rrdir.blk 2012-09-05 19:09:30,514 DEBUG quick_subs about to run mkblkdir 2012-09-05 19:09:30,514 DEBUG quick_subs database still exists; rerunning mkdirblk 2012-09-05 19:09:30,515 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx64/mkblkdir mkblkdir.tmp 2012-09-05 19:09:30,523 DEBUG quick_subs database passes. 2012-09-05 19:09:30,523 DEBUG quick_subs start_end_time 2012/08/31 02:29:24 to 2012/09/05 19:04:24 2012-09-05 19:09:30,523 DEBUG quick_subs dd0: 243.103750 dd1: 248.794722 2012-09-05 19:09:30,523 INFO quick_adcp --------------------- 2012-09-05 19:09:30,523 INFO quick_adcp loaded_time_range is 2012/08/31 02:29:24 to 2012/09/05 19:04:24 2012-09-05 19:09:30,523 INFO quick_adcp (243.103750 to 248.794722) 2012-09-05 19:09:30,524 INFO quick_adcp origdb_time_range is 2012/08/31 02:29:24 to 2012/09/05 18:49:24 2012-09-05 19:09:30,524 INFO quick_adcp (243.103750 to 248.784306) 2012-09-05 19:09:30,524 INFO quick_adcp thisload_time_range is 2012/09/05 07:29:24 to 2012/09/05 19:04:24 2012-09-05 19:09:30,524 INFO quick_adcp (248.312083 to 248.312083) 2012-09-05 19:09:30,524 INFO quick_adcp --------------------- 2012-09-05 19:09:30,524 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,524 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/adcpdb 2012-09-05 19:09:30,524 DEBUG quick_setup running python command "lst_conf" 2012-09-05 19:09:30,524 DEBUG quick_subs dbname: a_rr output: a_rr.cnh time_ranges: all 2012-09-05 19:09:30,524 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/lst_conf lst_conf.tmp 2012-09-05 19:09:30,683 DEBUG quick_setup found (in edit/asetup.m): 2012-09-05 19:09:30,683 DEBUG quick_setup config.beamangle is 30 2012-09-05 19:09:30,683 DEBUG quick_run file edit/codas_editparams.txt exists. not replacing 2012-09-05 19:09:30,683 DEBUG quick_run ------------ step 4: run setflags ------------- 2012-09-05 19:09:30,683 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,683 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/edit 2012-09-05 19:09:30,683 DEBUG quick_setup running python command "setflags" 2012-09-05 19:09:30,683 DEBUG quick_subs dbname: ../adcpdb/a_rr pg_min: 50 set_range_bit time_ranges: all 2012-09-05 19:09:30,684 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/setflags setflags.tmp 2012-09-05 19:09:30,699 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2012-09-05 19:09:30,699 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,699 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:30,699 DEBUG quick_setup running python command "catnav" 2012-09-05 19:09:30,700 DEBUG quick_run ------------ step 6: list heading ------------- 2012-09-05 19:09:30,700 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2012-09-05 19:09:30,701 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:30,701 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/rotate 2012-09-05 19:09:30,701 DEBUG quick_setup running python command "lst_hdg" 2012-09-05 19:09:30,701 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: scn.hdg step_size= 1 year_base= 2012 time_ranges: all 2012-09-05 19:09:30,701 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/lst_hdg lst_hdg.tmp 2012-09-05 19:09:30,712 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2012-09-05 19:09:30,713 DEBUG quick_run hcorr_inst is ashtech 2012-09-05 19:09:30,713 DEBUG quick_mpl Starting plot: hcorr 2012-09-05 19:09:30,729 DEBUG quick_mplplots found 5.690965 days of data 2012-09-05 19:09:30,729 DEBUG quick_mplplots figures with 4 panels per page, 1.000000 days per panel 2012-09-05 19:09:30,729 DEBUG quick_mplplots printing 2 pages 2012-09-05 19:09:31,291 DEBUG quick_mpl Ending plot: hcorr 2012-09-05 19:09:31,291 DEBUG quick_run ------------ step 7: rotate ------------- 2012-09-05 19:09:31,292 DEBUG quick_setup cal/rotate/norotate.tmp exists 2012-09-05 19:09:31,292 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:31,292 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/rotate 2012-09-05 19:09:31,292 DEBUG quick_setup running python command "norotate" 2012-09-05 19:09:31,292 DEBUG quick_subs /* No rotation was done using the "rotate" command, but */ /* it is useful have the skeleton of a rotate.tmp file */ /* to edit, should the need arise. That is the purpose */ /* of this file. DB_NAME: ../../adcpdb/a_rr LOG_FILE: rotate.log TIME_RANGE: 2012/08/31 02:29:24 to 2012/09/05 19:04:24 OPTION_LIST: water_and_bottom_track: year_base= 2012 /* time_angle_file: time_angle.ang */ amplitude= 1.0 angle_0= 0.0 end end 2012-09-05 19:09:31,292 DEBUG quick_setup about to run echo "writing dummy rotate file" 2012-09-05 19:09:31,297 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2012-09-05 19:09:31,297 DEBUG quick_setup nav/as_nav.tmp exists 2012-09-05 19:09:31,298 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:31,298 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:31,298 DEBUG quick_setup running python command "as_nav" 2012-09-05 19:09:31,298 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2012 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2012/08/31 02:29:24 to 2012/09/05 19:04:24 /* the whole time range */ 2012-09-05 19:09:31,298 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/adcpsect as_nav.tmp 2012-09-05 19:09:31,323 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2012-09-05 19:09:31,324 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:31,324 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:31,324 DEBUG quick_setup running python command "refabs" 2012-09-05 19:09:31,324 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2012 ensemble_length= 300 gap_tolerance= 10 2012-09-05 19:09:31,324 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/refabs refabs.tmp 2012-09-05 19:09:31,339 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2012-09-05 19:09:31,340 DEBUG quick_setup nav/smoothr.tmp exists 2012-09-05 19:09:31,340 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:31,340 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:31,340 DEBUG quick_setup running python command "smoothr" 2012-09-05 19:09:31,340 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2012-09-05 19:09:31,340 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/smoothr smoothr.tmp 2012-09-05 19:09:31,405 DEBUG quick_adcp about to run numpy refsm 2012-09-05 19:09:31,405 DEBUG quick_npy Starting: refsm 2012-09-05 19:09:31,450 INFO nav dtmin = -0.50 dtmax = 0.50 2012-09-05 19:09:31,524 DEBUG quick_npy Ending: refsm 2012-09-05 19:09:31,524 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2012-09-05 19:09:31,524 DEBUG quick_setup nav/putnav.tmp exists 2012-09-05 19:09:31,524 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:31,524 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:31,524 DEBUG quick_setup running python command "putnav" 2012-09-05 19:09:31,524 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: a_rr_refsm.asc year_base= 2012 tolerance= 5 navigation_sources: gps end 2012-09-05 19:09:31,525 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/putnav putnav.tmp 2012-09-05 19:09:31,550 DEBUG quick_adcp plotting navigation 2012-09-05 19:09:31,550 DEBUG quick_mpl Starting plot: nav 2012-09-05 19:09:31,828 DEBUG quick_mpl Ending plot: nav 2012-09-05 19:09:31,828 DEBUG quick_mpl Starting plot: refl 2012-09-05 19:09:31,864 DEBUG quick_mplplots found 5.680554 days of data 2012-09-05 19:09:31,864 DEBUG quick_mplplots start day is 243.000000 2012-09-05 19:09:31,864 DEBUG quick_mplplots figures with 2.000000 days per page 2012-09-05 19:09:31,865 DEBUG quick_mplplots printing 3 pages 2012-09-05 19:09:31,865 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2012-09-05 19:09:31,865 INFO quick_mplplots startdd is 243.0 2012-09-05 19:09:31,865 INFO quick_mplplots dt is 2.0 2012-09-05 19:09:32,412 DEBUG quick_mpl Ending plot: refl 2012-09-05 19:09:32,412 DEBUG quick_run ------------ step 13: automatically find profile flags using python ------------- 2012-09-05 19:09:32,412 DEBUG quick_run find profile flags ------------ *** ------------- 2012-09-05 19:09:32,412 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,412 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/edit 2012-09-05 19:09:32,412 DEBUG quick_setup running python command "run_autoedit_npy" 2012-09-05 19:09:32,412 DEBUG quick_npy Starting: autoedit 2012-09-05 19:09:32,494 DEBUG quick_npy Ending: autoedit 2012-09-05 19:09:32,494 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2012-09-05 19:09:32,494 DEBUG quick_run starting in: /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,494 DEBUG quick_run executing commands from: edit 2012-09-05 19:09:32,495 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx64/badbin ../adcpdb/a_rr abadbin_tmp.asc 2012-09-05 19:09:32,502 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx64/set_lgb ../adcpdb/a_rr 30 2012-09-05 19:09:32,508 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx64/setflags setflags.tmp 2012-09-05 19:09:32,525 DEBUG quick_run changing directories back to /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,525 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2012-09-05 19:09:32,525 DEBUG quick_setup nav/as_nav.tmp exists 2012-09-05 19:09:32,525 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,525 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:32,525 DEBUG quick_setup running python command "as_nav" 2012-09-05 19:09:32,525 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2012 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2012/08/31 02:29:24 to 2012/09/05 19:04:24 /* the whole time range */ 2012-09-05 19:09:32,526 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/adcpsect as_nav.tmp 2012-09-05 19:09:32,552 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2012-09-05 19:09:32,553 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,553 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:32,553 DEBUG quick_setup running python command "refabs" 2012-09-05 19:09:32,553 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2012 ensemble_length= 300 gap_tolerance= 10 2012-09-05 19:09:32,553 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/refabs refabs.tmp 2012-09-05 19:09:32,569 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2012-09-05 19:09:32,570 DEBUG quick_setup nav/smoothr.tmp exists 2012-09-05 19:09:32,570 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,570 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:32,570 DEBUG quick_setup running python command "smoothr" 2012-09-05 19:09:32,570 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2012-09-05 19:09:32,570 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/smoothr smoothr.tmp 2012-09-05 19:09:32,633 DEBUG quick_adcp running refsm 2012-09-05 19:09:32,634 DEBUG quick_npy Starting: refsm 2012-09-05 19:09:32,675 INFO nav dtmin = -0.50 dtmax = 0.50 2012-09-05 19:09:32,725 DEBUG quick_npy Ending: refsm 2012-09-05 19:09:32,725 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2012-09-05 19:09:32,725 DEBUG quick_setup nav/putnav.tmp exists 2012-09-05 19:09:32,725 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:32,725 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:32,725 DEBUG quick_setup running python command "putnav" 2012-09-05 19:09:32,726 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: a_rr_refsm.asc year_base= 2012 tolerance= 5 navigation_sources: gps end 2012-09-05 19:09:32,726 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/putnav putnav.tmp 2012-09-05 19:09:32,751 DEBUG quick_mpl Starting plot: nav 2012-09-05 19:09:33,021 DEBUG quick_mpl Ending plot: nav 2012-09-05 19:09:33,022 DEBUG quick_mpl Starting plot: refl 2012-09-05 19:09:33,058 DEBUG quick_mplplots found 5.680554 days of data 2012-09-05 19:09:33,059 DEBUG quick_mplplots start day is 243.000000 2012-09-05 19:09:33,059 DEBUG quick_mplplots figures with 2.000000 days per page 2012-09-05 19:09:33,059 DEBUG quick_mplplots printing 3 pages 2012-09-05 19:09:33,059 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2012-09-05 19:09:33,059 INFO quick_mplplots startdd is 243.0 2012-09-05 19:09:33,059 INFO quick_mplplots dt is 2.0 2012-09-05 19:09:33,611 DEBUG quick_mpl Ending plot: refl 2012-09-05 19:09:33,611 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2012-09-05 19:09:33,611 DEBUG quick_setup edit/lst_temp.tmp exists 2012-09-05 19:09:33,611 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:33,611 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/edit 2012-09-05 19:09:33,612 DEBUG quick_setup running python command "lst_temp" 2012-09-05 19:09:33,612 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr.tem step_size= 1 year_base= 2012 time_ranges: all 2012-09-05 19:09:33,612 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/lst_temp lst_temp.tmp 2012-09-05 19:09:33,627 DEBUG quick_mpl Starting plot: temp 2012-09-05 19:09:33,640 DEBUG quick_mplplots plotting 1640 points 2012-09-05 19:09:33,844 DEBUG quick_mpl Ending plot: temp 2012-09-05 19:09:33,844 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2012-09-05 19:09:33,845 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2012-09-05 19:09:33,845 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:33,845 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/botmtrk 2012-09-05 19:09:33,845 DEBUG quick_setup running python command "lst_btrk" 2012-09-05 19:09:33,845 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: a_rr.btm step_size= 1 year_base= 2012 time_ranges: 2012/08/31 02:29:24 to 2012/09/05 19:04:24 /* whole time range */ 2012-09-05 19:09:33,845 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/lst_btrk lst_btrk.tmp 2012-09-05 19:09:33,854 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2012-09-05 19:09:33,855 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:33,855 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/botmtrk 2012-09-05 19:09:33,855 DEBUG quick_setup running python command "refabsbt" 2012-09-05 19:09:33,855 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.btm fix_file: ../../nav/a_rr.gps output: a_rr.ref year_base= 2012 ensemble_length= 300 gap_tolerance= 60 2012-09-05 19:09:33,855 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/refabsbt refabsbt.tmp 2012-09-05 19:09:33,861 DEBUG quick_mpl Starting plot: btcal 2012-09-05 19:09:33,862 DEBUG quick_mplplots No data in a_rr.btm 2012-09-05 19:09:33,862 DEBUG quick_mplplots Returning from Btplot with no output 2012-09-05 19:09:33,862 DEBUG quick_mpl Ending plot: btcal 2012-09-05 19:09:33,862 DEBUG quick_setup nav/as_nav.tmp exists 2012-09-05 19:09:33,862 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:33,862 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/nav 2012-09-05 19:09:33,862 DEBUG quick_setup running python command "as_nav" 2012-09-05 19:09:33,862 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2012 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2012/08/31 02:29:24 to 2012/09/05 19:04:24 /* the whole time range */ 2012-09-05 19:09:33,862 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/adcpsect as_nav.tmp 2012-09-05 19:09:33,886 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2012-09-05 19:09:33,886 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:33,886 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/watertrk 2012-09-05 19:09:33,886 DEBUG quick_setup running python command "timslip" 2012-09-05 19:09:33,886 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_rr.gps reference_file: ../../nav/a_rr.nav output_file: a_rr_7.cal year_base= 2012 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2012-09-05 19:09:33,886 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/timslip timslip.tmp 2012-09-05 19:09:33,896 DEBUG quick_mpl Starting plot: wtcal 2012-09-05 19:09:33,898 DEBUG quick_mplplots Found 10 calibration points 2012-09-05 19:09:34,530 DEBUG quick_mpl Ending plot: wtcal 2012-09-05 19:09:34,530 DEBUG quick_run ------------ calib: guess transducer location compared to gps ------------- 2012-09-05 19:09:34,530 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,530 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/cal/watertrk 2012-09-05 19:09:34,530 DEBUG quick_setup running python command "run_guess_xducerxy_npy" 2012-09-05 19:09:34,530 DEBUG quick_npy Starting: guess_xducerxy 2012-09-05 19:09:34,583 DEBUG quick_npy Ending: guess_xducerxy 2012-09-05 19:09:34,584 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2012-09-05 19:09:34,584 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,584 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/vector 2012-09-05 19:09:34,584 DEBUG quick_setup running python command "timegrid" 2012-09-05 19:09:34,584 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/timegrid a_rr.tmp 2012-09-05 19:09:34,591 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,591 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/vector 2012-09-05 19:09:34,591 DEBUG quick_setup running python command "as_vect" 2012-09-05 19:09:34,591 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/adcpsect as_vect.tmp 2012-09-05 19:09:34,617 DEBUG quick_asect done making vector matfiles 2012-09-05 19:09:34,617 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,617 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/contour 2012-09-05 19:09:34,617 DEBUG quick_setup running python command "timegrid" 2012-09-05 19:09:34,617 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/timegrid a_rr.tmp 2012-09-05 19:09:34,625 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,625 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/contour 2012-09-05 19:09:34,625 DEBUG quick_setup running python command "as_cont" 2012-09-05 19:09:34,625 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx64/adcpsect as_cont.tmp 2012-09-05 19:09:34,667 DEBUG quick_setup starting in /home/data/RR1210/proc/nb150 2012-09-05 19:09:34,667 DEBUG quick_setup executing commands from /home/data/RR1210/proc/nb150/contour 2012-09-05 19:09:34,667 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_rr 2012-09-05 19:09:34,766 DEBUG quick_asect done running getmat with "allbins" 2012-09-05 19:09:34,786 INFO root copying NOFIG to /home/adcp/www/figures/nb150_hcorr_plot.png 2012-09-05 19:09:34,787 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/nb150_hcorr_plot_thumb.png 2012-09-05 19:09:34,787 DEBUG root matfile is contour/contour_uv.mat 2012-09-05 19:09:34,789 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/nb150_cont_uv.mat 2012-09-05 19:09:34,789 DEBUG root matfile is vector/vector_uv.mat 2012-09-05 19:09:34,789 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/nb150_vect_uv.mat 2012-09-05 19:09:34,789 DEBUG root matfile is contour/contour_xy.mat 2012-09-05 19:09:34,790 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/nb150_cont_xy.mat 2012-09-05 19:09:34,790 DEBUG root matfile is vector/vector_xy.mat 2012-09-05 19:09:34,790 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/nb150_vect_xy.mat 2012-09-05 19:09:34,790 DEBUG root about to copy file edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2012-09-05 19:09:34,790 INFO root copying edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2012-09-05 19:09:34,982 DEBUG root about to copy netcdf file /home/data/RR1210/proc/nb150/contour/nb150.nc to /home/adcp/www/data/nb150.nc 2012-09-05 19:09:34,987 INFO root copying edit/a_rr.tem to /home/adcp/www/data/nb150.nc 2012-09-05 19:09:35,001 INFO root generating pingstats for nb150 2012-09-05 19:09:35,001 INFO root Ending quick_adcp.py