2012-07-16 17:00:25,249 DEBUG quick_adcp progdir = /home/currents/programs 2012-07-16 17:00:25,249 DEBUG quick_adcp binos = lnx64 2012-07-16 17:00:25,251 INFO quick_adcp importing numpy 2012-07-16 17:00:25,267 INFO quick_adcp importing matplotlib 2012-07-16 17:00:25,447 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ aflagit_setup as_cont as_nav as_vect asetup catnav check_beamangle check_dbinfo check_headcorr check_opts check_uhdascfg ddtime def_qlist del_overlapping fill_thisload_timerange get_asvars get_cmd_timerange get_filelist get_nodb_times get_time_range getmat ldcodas listblocks llgrid loadping lst_btrk lst_conf lst_hdg lst_temp mpltest norotate opts plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp_mpl plotwtcal_mpl putnav refabs refabsbt rotate rotated run_adcpsect run_applyedit run_autoedit_npy run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_guess_xducerxy run_guess_xducerxy_npy run_loaddb run_loadlta_npy run_loadping run_lstconfig run_lsthdg run_lsttemp run_matbincmd run_matfiles run_pingavg_npy run_plotter run_putnav run_py_codaseditsetup run_py_findpflags run_py_pingeditsetup run_pybincmd_lta run_pybincmd_uhdas run_pygbin_npy run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scanbin_npy run_scandata run_scanlta_npy run_scanping_npy run_setflags run_smoothr run_updategbin run_updatepygbin run_xducerxy run_xducerxy_npy scanping setflags smoothr timegrid timslip ubprint user_defined_headfunc write_codas_editdefaults write_ping_editdefaults write_timerange_file zapsetup 2012-07-16 17:00:25,447 DEBUG quick_adcp cwd is /home/data/RR1208/proc/nb150 about to run these steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2012-07-16 17:00:25,448 DEBUG quick_adcp original fix file is a_rr.gps 2012-07-16 17:00:25,448 DEBUG quick_adcp smoothed nav file is a_rr_refsm.asc 2012-07-16 17:00:25,464 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR1208/raw/nb150/rr2012_181_01222.raw ... 2012-07-16 17:00:25,464 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR1208/raw/nb150/rr2012_181_01222.raw ... 2012-07-16 17:00:25,465 DEBUG quick_adcp Mon Jul 16 17:00:25 2012 running quick_adcp.py as follows: --cntfile /home/data/RR1208/proc/nb150/nb150_qpy.cnt ----- adcpsect variables ------ cbasename contour dbname a_rr dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375] firstdepth 21 gridnum 80 increment 5 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2011 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ adjust_time 1 auto True beamangle 30 best_loggerdday_name unix_dday best_utcdday_name dday bindir /home/currents/programs/codas3/bin/lnx64 binos lnx64 btrk_step 1 cfgpath /home/data/RR1208/proc/nb150/config cntfile /home/data/RR1208/proc/nb150/nb150_qpy.cnt commands None configtype python cruisename RR1208 data_def vmadcp.def datadir /home/data/RR1208/raw/nb150 datafile_glob *.raw datatype uhdas dbname a_rr dday_bailout None debug False diarystr diary quick_adcp.diary displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth None editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/RR1208/raw/nb150/rr2012_181_01222.raw', '/home/data/RR1208/raw/nb150/rr2012_181_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_181_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_181_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_181_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_181_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_181_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_181_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_181_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_181_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_181_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_181_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_182_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_182_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_182_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_182_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_182_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_182_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_182_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_182_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_182_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_182_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_182_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_182_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_183_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_183_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_183_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_183_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_183_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_183_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_183_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_183_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_183_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_183_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_183_68993.raw', '/home/data/RR1208/raw/nb150/rr2012_183_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_183_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_184_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_184_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_184_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_184_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_184_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_184_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_184_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_184_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_184_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_184_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_184_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_184_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_185_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_185_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_185_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_185_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_185_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_185_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_185_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_185_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_185_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_185_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_185_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_185_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_186_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_186_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_186_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_186_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_186_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_186_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_186_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_186_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_186_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_186_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_186_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_186_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_187_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_187_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_187_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_187_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_187_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_187_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_187_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_187_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_187_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_187_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_187_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_187_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_188_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_188_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_188_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_188_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_188_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_188_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_188_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_188_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_188_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_188_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_188_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_188_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_189_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_189_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_189_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_189_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_189_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_189_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_189_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_189_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_189_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_189_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_189_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_189_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_190_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_190_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_190_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_190_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_190_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_190_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_190_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_190_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_190_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_190_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_190_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_190_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_191_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_191_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_191_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_191_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_191_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_191_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_191_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_191_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_191_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_191_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_191_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_191_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_192_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_192_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_192_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_192_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_192_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_192_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_192_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_192_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_192_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_192_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_192_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_192_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_193_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_193_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_193_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_193_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_193_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_193_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_193_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_193_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_193_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_193_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_193_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_193_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_194_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_194_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_194_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_194_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_194_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_194_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_194_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_194_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_194_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_194_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_194_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_194_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_195_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_195_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_195_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_195_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_195_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_195_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_195_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_195_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_195_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_195_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_195_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_195_79222.raw', '/home/data/RR1208/raw/nb150/rr2012_196_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_196_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_196_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_196_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_196_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_196_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_196_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_196_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_196_57600.raw', '/home/data/RR1208/raw/nb150/rr2012_196_64800.raw', '/home/data/RR1208/raw/nb150/rr2012_196_72000.raw', '/home/data/RR1208/raw/nb150/rr2012_196_79200.raw', '/home/data/RR1208/raw/nb150/rr2012_197_00000.raw', '/home/data/RR1208/raw/nb150/rr2012_197_07200.raw', '/home/data/RR1208/raw/nb150/rr2012_197_14400.raw', '/home/data/RR1208/raw/nb150/rr2012_197_21600.raw', '/home/data/RR1208/raw/nb150/rr2012_197_28800.raw', '/home/data/RR1208/raw/nb150/rr2012_197_36000.raw', '/home/data/RR1208/raw/nb150/rr2012_197_43200.raw', '/home/data/RR1208/raw/nb150/rr2012_197_50400.raw', '/home/data/RR1208/raw/nb150/rr2012_197_57600.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 21 fixfile a_rr.gps frequency 150 gbin_style python gbindirbase /home/data/RR1208/gbin hcorr_inst ashtech help False hidedisplay True incremental True instname nb150 jitter 15 max_BLKprofiles 399 max_search_depth 500 maxrunsecs None min_filter_fraction 0.5 model nb nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_rr.gps overview False pgmin 50 ping_headcorr False pingtype nb post_headcorr None printformats png proc_engine python proc_yearbase 2011 progdir /home/currents/programs py_gbindirbase /home/data/RR1208/gbin quiet False rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 setup_info False skip_avg True smfile a_rr_refsm.asc sonar nb150 steps2rerun timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False vardoc False varvals False wtrk_step 7 xducer_dx None xducer_dy None yearbase 2011 configured to run the following steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2012-07-16 17:00:25,466 DEBUG quick_adcp about to run numpy scan, requiring python gbins 2012-07-16 17:00:25,612 DEBUG quick_adcp in quick_adcp.py: after scan; look for database times in /home/data/RR1208/proc/nb150 2012-07-16 17:00:25,612 DEBUG quick_adcp looking for database with adcpdb/a_rr*.blk 2012-07-16 17:00:25,612 DEBUG quick_adcp database found: listing blocks 2012-07-16 17:00:25,624 DEBUG quick_adcp in quick_adcp.py before load, just looked for database times 2012-07-16 17:00:25,624 DEBUG quick_adcp origdb_time_range is 2012/06/30 00:25:23 to 2012/07/16 16:40:21 2012-07-16 17:00:25,624 DEBUG quick_adcp (546.017627 to 562.694687) 2012-07-16 17:00:25,680 INFO quick_adcp --------------------- 2012-07-16 17:00:25,681 INFO quick_adcp loaded_time_range is 2012/06/30 00:25:23 to 2012/07/16 16:55:21 2012-07-16 17:00:25,681 INFO quick_adcp (546.017627 to 562.705104) 2012-07-16 17:00:25,681 INFO quick_adcp origdb_time_range is 2012/06/30 00:25:23 to 2012/07/16 16:40:21 2012-07-16 17:00:25,681 INFO quick_adcp (546.017627 to 562.694687) 2012-07-16 17:00:25,681 INFO quick_adcp thisload_time_range is 2012/07/16 16:25:21 to 2012/07/16 16:55:21 2012-07-16 17:00:25,681 INFO quick_adcp (562.684271 to 562.684271) 2012-07-16 17:00:25,681 INFO quick_adcp --------------------- 2012-07-16 17:00:29,422 DEBUG quick_adcp about to run numpy refsm 2012-07-16 17:00:29,780 DEBUG quick_adcp plotting navigation 2012-07-16 17:00:31,848 DEBUG quick_adcp running refsm