2012-06-07 16:25:39,659 INFO     quick_adcp   importing numpy
2012-06-07 16:25:39,677 INFO     quick_adcp   importing matplotlib
2012-06-07 16:25:39,749 INFO     quick_adcp   cwd is /data/MGL1209/proc/os75bb
about to run these steps:
 - editsetup
 - scandata
 - avg_and_load
 - setflags
 - getnav
 - get_headcorr
 - rotate
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - calib
 - matfiles
 - find_pflags
2012-06-07 16:25:39,749 INFO     quick_adcp   original fix file is a_mgl.gps
2012-06-07 16:25:39,749 INFO     quick_adcp   smoothed nav file is a_mgl_refsm.asc
2012-06-07 16:25:39,760 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:39,760 INFO     quick_adcp   step 1: set up editing files 
2012-06-07 16:25:39,761 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:39,761 INFO     quick_adcp   step 2: scan files for time range
2012-06-07 16:25:39,761 INFO     quick_adcp   about to run numpy scan, requiring python gbins
2012-06-07 16:25:39,954 INFO     quick_adcp   in quick_adcp.py: after scan; look for database times in  
  /data/MGL1209/proc/os75bb 
2012-06-07 16:25:39,954 INFO     quick_adcp   looking for database with adcpdb/a_mgl*.blk
2012-06-07 16:25:39,955 INFO     quick_adcp   database found: listing blocks
2012-06-07 16:25:39,966 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:39,967 INFO     quick_adcp   step 3: generate averaged data...
2012-06-07 16:25:40,007 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:40,007 INFO     quick_adcp   step 4: load averaged data (to database)
2012-06-07 16:25:40,060 INFO     quick_adcp   loaded_time_range is 2012/05/28  22:45:37 to 2012/06/07  16:20:36 
2012-06-07 16:25:40,060 INFO     quick_adcp   (148.948345 to 158.680972)
2012-06-07 16:25:40,061 INFO     quick_adcp   origdb_time_range is 2012/05/28  22:45:37 to 2012/06/07  16:05:34 
2012-06-07 16:25:40,061 INFO     quick_adcp   (148.948345 to 158.670532)
2012-06-07 16:25:40,061 INFO     quick_adcp   thisload_time_range is 2012/06/07 07:45:35  to  2012/06/07 16:20:36 
2012-06-07 16:25:40,061 INFO     quick_adcp   (158.323322 to 158.323322)
2012-06-07 16:25:40,061 INFO     quick_adcp   ---------------------
2012-06-07 16:25:40,579 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:40,579 INFO     quick_adcp   step 5: set up files for gautoedit.py
2012-06-07 16:25:40,579 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:40,579 INFO     quick_adcp   step 6: set up files for gautoedit.py
2012-06-07 16:25:40,608 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:40,609 INFO     quick_adcp   step 7: get navigation
2012-06-07 16:25:40,633 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:40,634 INFO     quick_adcp   step 8: get heading correction
2012-06-07 16:25:41,383 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,386 INFO     quick_adcp   step 9: rotate velocities
2012-06-07 16:25:41,392 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,392 INFO     quick_adcp   step 10: nav steps: run adcpsect
2012-06-07 16:25:41,432 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,433 INFO     quick_adcp   step 11: nav steps: run refabs
2012-06-07 16:25:41,469 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,469 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2012-06-07 16:25:41,600 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,601 INFO     quick_adcp   step 13: nav steps: smooth navigation
2012-06-07 16:25:41,601 INFO     quick_adcp   about to run numpy refsm
2012-06-07 16:25:41,820 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:41,820 INFO     quick_adcp   step 14: nav steps: put smoothed nav into codasdb 
2012-06-07 16:25:42,493 INFO     quick_adcp   plotting navigation
2012-06-07 16:25:42,859 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:42,859 INFO     quick_adcp   step 15: nav steps: make reflayer plots 
2012-06-07 16:25:43,640 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:43,640 INFO     quick_adcp   step 16: find profile flags 
2012-06-07 16:25:43,788 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:43,788 INFO     quick_adcp   step 17: apply editing 
2012-06-07 16:25:43,837 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:43,837 INFO     quick_adcp   step 18: run nav steps 
2012-06-07 16:25:45,429 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:45,429 INFO     quick_adcp   step 19: plot temperature 
2012-06-07 16:25:45,732 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:45,732 INFO     quick_adcp   step 20: run calibration steps 
2012-06-07 16:25:46,708 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:46,746 INFO     quick_adcp   step 21: extract matlab "allbins" 
2012-06-07 16:25:47,125 INFO     quick_adcp   ---------------------------------------------

2012-06-07 16:25:47,126 INFO     quick_adcp   step 22: write "cruise_info.txt"