2011-06-04 17:50:33,842 DEBUG quick_adcp progdir = /home/currents/programs 2011-06-04 17:50:33,842 DEBUG quick_adcp binos = lnx64 2011-06-04 17:50:33,844 INFO quick_adcp importing numpy 2011-06-04 17:50:33,845 INFO quick_adcp importing matplotlib 2011-06-04 17:50:33,845 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ aflagit_setup as_cont as_nav as_vect asetup catnav check_beamangle check_dbinfo check_headcorr check_opts check_uhdascfg ddtime def_qlist del_overlapping fill_thisload_timerange get_asvars get_cmd_timerange get_filelist get_nodb_times get_time_range getmat ldcodas listblocks llgrid loadping lst_btrk lst_conf lst_hdg lst_temp mpltest norotate opts plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp_mpl plotwtcal_mpl putnav refabs refabsbt rotate rotated run_adcpsect run_applyedit run_autoedit_npy run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_loaddb run_loadping run_lstconfig run_lsttemp run_matbincmd run_matfiles run_pingavg_npy run_plotter run_putnav run_py_codaseditsetup run_py_findpflags run_py_pingeditsetup run_pybincmd run_pygbin_npy run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scanbin_npy run_scandata run_scanping_npy run_setflags run_smoothr run_updategbin run_updatepygbin run_xducerxy scanping setflags smoothr timegrid timslip ubprint user_defined_headfunc write_codas_editdefaults write_ping_editdefaults write_timerange_file zapsetup 2011-06-04 17:50:33,845 DEBUG quick_adcp cwd is /home/data/HLY11TB_01/proc/os75nb about to run these steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2011-06-04 17:50:33,845 DEBUG quick_adcp original fix file is a_hly.gps 2011-06-04 17:50:33,845 DEBUG quick_adcp smoothed nav file is a_hly_refsm.asc 2011-06-04 17:50:33,851 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/HLY11TB_01/raw/os75/hly2011_147_04805.raw ... 2011-06-04 17:50:33,851 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/HLY11TB_01/raw/os75/hly2011_147_04805.raw ... 2011-06-04 17:50:33,852 DEBUG quick_adcp Sat Jun 4 17:50:33 2011 running quick_adcp.py as follows: --cntfile /home/data/HLY11TB_01/proc/os75nb/os75nb_qpy.cnt ----- adcpsect variables ------ cbasename contour dbname a_hly dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675, 700, 725, 750, 775] firstdepth 31 gridnum 80 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2011 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ adjust_time 1 auto True beamangle 30 best_loggerdday_name unix_dday best_utcdday_name dday bindir /home/currents/programs/codas3/bin/lnx64 binos lnx64 btrk_step 1 cfgpath /home/data/HLY11TB_01/proc/os75nb/config cntfile /home/data/HLY11TB_01/proc/os75nb/os75nb_qpy.cnt commands None configtype python cruisename HLY11TB_01 data_def vmadcp.def datadir /home/data/HLY11TB_01/raw/os75 datafile_glob *.raw datatype uhdas dbname a_hly dday_bailout None debug False diarystr diary quick_adcp.diary displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/HLY11TB_01/raw/os75/hly2011_147_04805.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_147_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_148_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_149_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_150_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_151_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_152_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_57600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_64800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_72000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_153_79200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_00000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_07200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_14400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_21600.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_28800.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_36000.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_43200.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_50400.raw', '/home/data/HLY11TB_01/raw/os75/hly2011_154_57600.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 31 fixfile a_hly.gps frequency 75 gbin_style python gbindirbase /home/data/HLY11TB_01/gbin hcorr_inst None help False hidedisplay True incremental True instname os75 jitter 15 max_BLKprofiles 399 max_search_depth 1000 maxrunsecs None min_filter_fraction 0.5 model os nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_hly.gps overview False pgmin 50 ping_headcorr False pingtype nb post_headcorr None printformats png proc_engine python proc_yearbase 2011 progdir /home/currents/programs py_gbindirbase /home/data/HLY11TB_01/gbin quiet False rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 setup_info False skip_avg True smfile a_hly_refsm.asc sonar os75nb steps2rerun timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2011 configured to run the following steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2011-06-04 17:50:33,853 DEBUG quick_adcp about to run numpy scan, requiring python gbins 2011-06-04 17:50:33,964 DEBUG quick_adcp in quick_adcp.py: after scan; look for database times in /home/data/HLY11TB_01/proc/os75nb 2011-06-04 17:50:33,964 DEBUG quick_adcp looking for database with adcpdb/a_hly*.blk 2011-06-04 17:50:33,965 DEBUG quick_adcp database found: listing blocks 2011-06-04 17:50:33,972 DEBUG quick_adcp in quick_adcp.py before load, just looked for database times 2011-06-04 17:50:33,973 DEBUG quick_adcp origdb_time_range is 2011/05/28 01:25:06 to 2011/06/04 17:20:06 2011-06-04 17:50:33,973 DEBUG quick_adcp (147.059097 to 154.722292) 2011-06-04 17:50:34,042 INFO quick_adcp --------------------- 2011-06-04 17:50:34,042 INFO quick_adcp loaded_time_range is 2011/05/28 01:25:06 to 2011/06/04 17:50:08 2011-06-04 17:50:34,042 INFO quick_adcp (147.059097 to 154.743148) 2011-06-04 17:50:34,043 INFO quick_adcp origdb_time_range is 2011/05/28 01:25:06 to 2011/06/04 17:20:06 2011-06-04 17:50:34,043 INFO quick_adcp (147.059097 to 154.722292) 2011-06-04 17:50:34,043 INFO quick_adcp thisload_time_range is 2011/06/04 08:25:08 to 2011/06/04 17:50:08 2011-06-04 17:50:34,043 INFO quick_adcp (154.350787 to 154.350787) 2011-06-04 17:50:34,043 INFO quick_adcp --------------------- 2011-06-04 17:50:34,310 DEBUG quick_adcp about to run numpy refsm 2011-06-04 17:50:34,465 DEBUG quick_adcp plotting navigation 2011-06-04 17:50:35,590 DEBUG quick_adcp step 15: rerun nav steps, redo reflayer plots 2011-06-04 17:50:35,729 DEBUG quick_adcp running refsm