2011-09-29 17:38:23,292 DEBUG quick_adcp progdir = /home/currents/programs 2011-09-29 17:38:23,292 DEBUG quick_adcp binos = lnx64 2011-09-29 17:38:23,295 INFO quick_adcp importing numpy 2011-09-29 17:38:23,295 INFO quick_adcp importing matplotlib 2011-09-29 17:38:23,295 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ aflagit_setup as_cont as_nav as_vect asetup catnav check_beamangle check_dbinfo check_headcorr check_opts check_uhdascfg ddtime def_qlist del_overlapping fill_thisload_timerange get_asvars get_cmd_timerange get_filelist get_nodb_times get_time_range getmat ldcodas listblocks llgrid loadping lst_btrk lst_conf lst_hdg lst_temp mpltest norotate opts plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp_mpl plotwtcal_mpl putnav refabs refabsbt rotate rotated run_adcpsect run_applyedit run_autoedit_npy run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_loaddb run_loadping run_lstconfig run_lsttemp run_matbincmd run_matfiles run_pingavg_npy run_plotter run_putnav run_py_codaseditsetup run_py_findpflags run_py_pingeditsetup run_pybincmd run_pygbin_npy run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scanbin_npy run_scandata run_scanping_npy run_setflags run_smoothr run_updategbin run_updatepygbin run_xducerxy scanping setflags smoothr timegrid timslip ubprint user_defined_headfunc write_codas_editdefaults write_ping_editdefaults write_timerange_file zapsetup 2011-09-29 17:38:23,295 DEBUG quick_adcp cwd is /home/data/EN499/proc/os75nb about to run these steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2011-09-29 17:38:23,296 DEBUG quick_adcp original fix file is a_en.gps 2011-09-29 17:38:23,296 DEBUG quick_adcp smoothed nav file is a_en_refsm.asc 2011-09-29 17:38:23,306 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/EN499/raw/os75/en2011_261_52661.raw ... 2011-09-29 17:38:23,307 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/EN499/raw/os75/en2011_261_52661.raw ... 2011-09-29 17:38:23,308 DEBUG quick_adcp Thu Sep 29 17:38:23 2011 running quick_adcp.py as follows: --cntfile /home/data/EN499/proc/os75nb/os75nb_qpy.cnt ----- adcpsect variables ------ cbasename contour dbname a_en dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675, 700, 725, 750, 775] firstdepth 29 gridnum 80 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2011 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ adjust_time 1 auto True beamangle 30 best_loggerdday_name unix_dday best_utcdday_name dday bindir /home/currents/programs/codas3/bin/lnx64 binos lnx64 btrk_step 1 cfgpath /home/data/EN499/proc/os75nb/config cntfile /home/data/EN499/proc/os75nb/os75nb_qpy.cnt commands None configtype python cruisename EN499 data_def vmadcp.def datadir /home/data/EN499/raw/os75 datafile_glob *.raw datatype uhdas dbname a_en dday_bailout None debug False diarystr diary quick_adcp.diary displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/EN499/raw/os75/en2011_261_52661.raw', '/home/data/EN499/raw/os75/en2011_261_57600.raw', '/home/data/EN499/raw/os75/en2011_261_64800.raw', '/home/data/EN499/raw/os75/en2011_261_72000.raw', '/home/data/EN499/raw/os75/en2011_261_79200.raw', '/home/data/EN499/raw/os75/en2011_262_00000.raw', '/home/data/EN499/raw/os75/en2011_262_07200.raw', '/home/data/EN499/raw/os75/en2011_262_14400.raw', '/home/data/EN499/raw/os75/en2011_262_21600.raw', '/home/data/EN499/raw/os75/en2011_262_28800.raw', '/home/data/EN499/raw/os75/en2011_262_36000.raw', '/home/data/EN499/raw/os75/en2011_262_43200.raw', '/home/data/EN499/raw/os75/en2011_262_50400.raw', '/home/data/EN499/raw/os75/en2011_262_57600.raw', '/home/data/EN499/raw/os75/en2011_262_64800.raw', '/home/data/EN499/raw/os75/en2011_262_72000.raw', '/home/data/EN499/raw/os75/en2011_262_79200.raw', '/home/data/EN499/raw/os75/en2011_263_00000.raw', '/home/data/EN499/raw/os75/en2011_263_07200.raw', '/home/data/EN499/raw/os75/en2011_263_14400.raw', '/home/data/EN499/raw/os75/en2011_263_21600.raw', '/home/data/EN499/raw/os75/en2011_263_28800.raw', '/home/data/EN499/raw/os75/en2011_263_36000.raw', '/home/data/EN499/raw/os75/en2011_263_43200.raw', '/home/data/EN499/raw/os75/en2011_263_50400.raw', '/home/data/EN499/raw/os75/en2011_263_57600.raw', '/home/data/EN499/raw/os75/en2011_263_64800.raw', '/home/data/EN499/raw/os75/en2011_263_72000.raw', '/home/data/EN499/raw/os75/en2011_263_79200.raw', '/home/data/EN499/raw/os75/en2011_264_00000.raw', '/home/data/EN499/raw/os75/en2011_264_07200.raw', '/home/data/EN499/raw/os75/en2011_264_14400.raw', '/home/data/EN499/raw/os75/en2011_264_21600.raw', '/home/data/EN499/raw/os75/en2011_264_28800.raw', '/home/data/EN499/raw/os75/en2011_264_36000.raw', '/home/data/EN499/raw/os75/en2011_264_43200.raw', '/home/data/EN499/raw/os75/en2011_264_50400.raw', '/home/data/EN499/raw/os75/en2011_264_57600.raw', '/home/data/EN499/raw/os75/en2011_264_64800.raw', '/home/data/EN499/raw/os75/en2011_264_72000.raw', '/home/data/EN499/raw/os75/en2011_264_79200.raw', '/home/data/EN499/raw/os75/en2011_265_00000.raw', '/home/data/EN499/raw/os75/en2011_265_07200.raw', '/home/data/EN499/raw/os75/en2011_265_14400.raw', '/home/data/EN499/raw/os75/en2011_265_21600.raw', '/home/data/EN499/raw/os75/en2011_265_28800.raw', '/home/data/EN499/raw/os75/en2011_265_36000.raw', '/home/data/EN499/raw/os75/en2011_265_43200.raw', '/home/data/EN499/raw/os75/en2011_265_50400.raw', '/home/data/EN499/raw/os75/en2011_265_57600.raw', '/home/data/EN499/raw/os75/en2011_265_64800.raw', '/home/data/EN499/raw/os75/en2011_265_72000.raw', '/home/data/EN499/raw/os75/en2011_265_79200.raw', '/home/data/EN499/raw/os75/en2011_266_00000.raw', '/home/data/EN499/raw/os75/en2011_266_07200.raw', '/home/data/EN499/raw/os75/en2011_266_14400.raw', '/home/data/EN499/raw/os75/en2011_266_21600.raw', '/home/data/EN499/raw/os75/en2011_266_28800.raw', '/home/data/EN499/raw/os75/en2011_266_36000.raw', '/home/data/EN499/raw/os75/en2011_266_43200.raw', '/home/data/EN499/raw/os75/en2011_266_50400.raw', '/home/data/EN499/raw/os75/en2011_266_57600.raw', '/home/data/EN499/raw/os75/en2011_266_64800.raw', '/home/data/EN499/raw/os75/en2011_266_72000.raw', '/home/data/EN499/raw/os75/en2011_266_79200.raw', '/home/data/EN499/raw/os75/en2011_267_00000.raw', '/home/data/EN499/raw/os75/en2011_267_07200.raw', '/home/data/EN499/raw/os75/en2011_267_14400.raw', '/home/data/EN499/raw/os75/en2011_267_21600.raw', '/home/data/EN499/raw/os75/en2011_267_28800.raw', '/home/data/EN499/raw/os75/en2011_267_36000.raw', '/home/data/EN499/raw/os75/en2011_267_43200.raw', '/home/data/EN499/raw/os75/en2011_267_50400.raw', '/home/data/EN499/raw/os75/en2011_267_57600.raw', '/home/data/EN499/raw/os75/en2011_267_64800.raw', '/home/data/EN499/raw/os75/en2011_267_72000.raw', '/home/data/EN499/raw/os75/en2011_267_79200.raw', '/home/data/EN499/raw/os75/en2011_268_00000.raw', '/home/data/EN499/raw/os75/en2011_268_07200.raw', '/home/data/EN499/raw/os75/en2011_268_14400.raw', '/home/data/EN499/raw/os75/en2011_268_21600.raw', '/home/data/EN499/raw/os75/en2011_268_28800.raw', '/home/data/EN499/raw/os75/en2011_268_36000.raw', '/home/data/EN499/raw/os75/en2011_268_43200.raw', '/home/data/EN499/raw/os75/en2011_268_50400.raw', '/home/data/EN499/raw/os75/en2011_268_57600.raw', '/home/data/EN499/raw/os75/en2011_268_64800.raw', '/home/data/EN499/raw/os75/en2011_268_72000.raw', '/home/data/EN499/raw/os75/en2011_268_79200.raw', '/home/data/EN499/raw/os75/en2011_269_00000.raw', '/home/data/EN499/raw/os75/en2011_269_07200.raw', '/home/data/EN499/raw/os75/en2011_269_14400.raw', '/home/data/EN499/raw/os75/en2011_269_21600.raw', '/home/data/EN499/raw/os75/en2011_269_28800.raw', '/home/data/EN499/raw/os75/en2011_269_36000.raw', '/home/data/EN499/raw/os75/en2011_269_43200.raw', '/home/data/EN499/raw/os75/en2011_269_50400.raw', '/home/data/EN499/raw/os75/en2011_269_57600.raw', '/home/data/EN499/raw/os75/en2011_269_64800.raw', '/home/data/EN499/raw/os75/en2011_269_72000.raw', '/home/data/EN499/raw/os75/en2011_269_79200.raw', '/home/data/EN499/raw/os75/en2011_270_00000.raw', '/home/data/EN499/raw/os75/en2011_270_07200.raw', '/home/data/EN499/raw/os75/en2011_270_14400.raw', '/home/data/EN499/raw/os75/en2011_270_21600.raw', '/home/data/EN499/raw/os75/en2011_270_28800.raw', '/home/data/EN499/raw/os75/en2011_270_36000.raw', '/home/data/EN499/raw/os75/en2011_270_43200.raw', '/home/data/EN499/raw/os75/en2011_270_50400.raw', '/home/data/EN499/raw/os75/en2011_270_57600.raw', '/home/data/EN499/raw/os75/en2011_270_64800.raw', '/home/data/EN499/raw/os75/en2011_270_72000.raw', '/home/data/EN499/raw/os75/en2011_270_79200.raw', '/home/data/EN499/raw/os75/en2011_271_00000.raw', '/home/data/EN499/raw/os75/en2011_271_07200.raw', '/home/data/EN499/raw/os75/en2011_271_14400.raw', '/home/data/EN499/raw/os75/en2011_271_21600.raw', '/home/data/EN499/raw/os75/en2011_271_28800.raw', '/home/data/EN499/raw/os75/en2011_271_36000.raw', '/home/data/EN499/raw/os75/en2011_271_43200.raw', '/home/data/EN499/raw/os75/en2011_271_50400.raw', '/home/data/EN499/raw/os75/en2011_271_57600.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 29 fixfile a_en.gps frequency 75 gbin_style python gbindirbase /home/data/EN499/gbin hcorr_inst ashpaq2 help False hidedisplay True incremental True instname os75 jitter 15 max_BLKprofiles 399 max_search_depth 1000 maxrunsecs None min_filter_fraction 0.5 model os nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_en.gps overview False pgmin 50 ping_headcorr False pingtype nb post_headcorr None printformats png proc_engine python proc_yearbase 2011 progdir /home/currents/programs py_gbindirbase /home/data/EN499/gbin quiet False rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 setup_info False skip_avg True smfile a_en_refsm.asc sonar os75nb steps2rerun timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2011 configured to run the following steps: editsetup scandata avg_and_load setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles find_pflags 2011-09-29 17:38:23,308 DEBUG quick_adcp about to run numpy scan, requiring python gbins 2011-09-29 17:38:23,501 DEBUG quick_adcp in quick_adcp.py: after scan; look for database times in /home/data/EN499/proc/os75nb 2011-09-29 17:38:23,501 DEBUG quick_adcp looking for database with adcpdb/a_en*.blk 2011-09-29 17:38:23,501 DEBUG quick_adcp database found: listing blocks 2011-09-29 17:38:23,515 DEBUG quick_adcp in quick_adcp.py before load, just looked for database times 2011-09-29 17:38:23,515 DEBUG quick_adcp origdb_time_range is 2011/09/19 14:42:44 to 2011/09/29 17:07:43 2011-09-29 17:38:23,515 DEBUG quick_adcp (261.613009 to 271.713692) 2011-09-29 17:38:23,628 INFO quick_adcp --------------------- 2011-09-29 17:38:23,628 INFO quick_adcp loaded_time_range is 2011/09/19 14:42:44 to 2011/09/29 17:37:43 2011-09-29 17:38:23,628 INFO quick_adcp (261.613009 to 271.734525) 2011-09-29 17:38:23,628 INFO quick_adcp origdb_time_range is 2011/09/19 14:42:44 to 2011/09/29 17:07:43 2011-09-29 17:38:23,628 INFO quick_adcp (261.613009 to 271.713692) 2011-09-29 17:38:23,629 INFO quick_adcp thisload_time_range is 2011/09/28 23:42:44 to 2011/09/29 17:37:43 2011-09-29 17:38:23,629 INFO quick_adcp (270.988009 to 270.988009) 2011-09-29 17:38:23,629 INFO quick_adcp --------------------- 2011-09-29 17:38:24,843 DEBUG quick_adcp about to run numpy refsm 2011-09-29 17:38:25,097 DEBUG quick_adcp plotting navigation 2011-09-29 17:38:26,412 DEBUG quick_adcp step 15: rerun nav steps, redo reflayer plots 2011-09-29 17:38:26,633 DEBUG quick_adcp running refsm