2010-11-21 18:07:44,649 DEBUG root about to write control file parameters to --yearbase 2010 --pingtype bb --cfgbase EN488 --cruisename EN488 --instclass os --instname os75 --dbname a_en --datatype uhdas --datadir /home/data/EN488/raw/os75 --cfgpath /home/data/EN488/proc/os75bb/config --ens_len 300 --ping_headcor --hcorr_inst ashpaq2 --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto --npycalc all --mplplots all 2010-11-21 18:07:44,650 DEBUG quick_adcp sys.argv = /home/currents/programs/uhdas/scripts/run_quick.py -d os75bb --npycalc all --mplplots all 2010-11-21 18:07:44,651 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ adcpcal aedit aflagit_setup as_cont as_nav as_vect asetup ashrot btcaluv catnav check_opts cleanup copy_ensfile ddtime def_qlist get_asvars get_cmd_timerange get_data2load_timerange get_filelist get_gyrodh get_headcorrstats get_lstblk_tr get_matcfgstr get_remaining_times get_time_range getmat ldcodas list2matcell llgrid loadens loadhdss loadlta loadping loaduh lst_btrk lst_conf lst_hdg lst_temp mpltest opts overlapping plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp plottemp_mpl plotwtcal_mpl print_attlog putnav refabs refabsbt refplot refsm rotate rotated run_adcpsect run_applyedit run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_listblocks run_loaddata run_lstconfig run_lsttemp run_matfiles run_plotter run_putnav run_rawsetup run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scandata run_setflags run_smoothr run_updategbin run_xducerxy scanping scanraw setflags smoothr startmatlab timegrid timslip ubprint update_gbin user_defined_headfunc xducerxy zapsetup 2010-11-21 18:07:44,651 DEBUG quick_adcp progdir = /home/currents/programs 2010-11-21 18:07:44,651 DEBUG quick_adcp binos = lnx 2010-11-21 18:07:44,651 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2010-11-21 18:07:44,652 DEBUG quick_setup yearbase is 2010, proc_yearbase is 2010 2010-11-21 18:07:44,652 DEBUG quick_setup numpy calculations to run: refsm 2010-11-21 18:07:44,652 DEBUG quick_setup mplplots to run: temp, nav, refl, hcorr, wtcal, btcal 2010-11-21 18:07:44,652 DEBUG quick_setup processing data logged with uhdas: 2010-11-21 18:07:44,652 DEBUG quick_setup datatype is uhdas 2010-11-21 18:07:44,652 DEBUG quick_setup pingtype is bb 2010-11-21 18:07:44,652 DEBUG quick_setup instclass is os 2010-11-21 18:07:44,652 DEBUG quick_setup no post-processing heading correction will be used 2010-11-21 18:07:44,652 DEBUG quick_setup transducer depth set in *_cfg.m file 2010-11-21 18:07:44,662 DEBUG quick_setup found (in edit/asetup.m): 2010-11-21 18:07:44,662 DEBUG quick_setup config.beamangle is 30 2010-11-21 18:07:44,662 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'bb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN488',... 'cfgpath' , '/home/data/EN488/proc/os75bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2010-11-21 18:07:44,662 DEBUG quick_setup ------- starting Matlab engine ------- 2010-11-21 18:07:44,662 DEBUG quick_setup ['/home/currents/programs/matlab'] 2010-11-21 18:07:44,665 DEBUG call_matlab starting to wait for initial prompt 2010-11-21 18:07:45,266 DEBUG call_matlab received initial prompt 2010-11-21 18:07:45,509 DEBUG quick_adcp cwd is /home/data/EN488/proc/os75bb about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-11-21 18:07:45,509 DEBUG quick_adcp original fix file is a_en.gps 2010-11-21 18:07:45,509 DEBUG quick_adcp smoothed nav file is a_en_refsm.asc 2010-11-21 18:07:45,509 DEBUG quick_asect extracting matlab files for os75, bb pings 2010-11-21 18:07:45,511 DEBUG quick_subs found 3 files using wildcard expansion from "/home/data/EN488/raw/os75/*.raw" 2010-11-21 18:07:45,511 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/EN488/raw/os75/en2010_324_56253.raw /home/data/EN488/raw/os75/en2010_324_57600.raw /home/data/EN488/raw/os75/en2010_324_64800.raw 2010-11-21 18:07:45,511 DEBUG quick_adcp LASTFILES invoked. using only 3 files from end of filelist 2010-11-21 18:07:45,511 DEBUG quick_adcp using delblks = 1 2010-11-21 18:07:45,512 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/EN488/raw/os75/en2010_324_56253.raw /home/data/EN488/raw/os75/en2010_324_57600.raw /home/data/EN488/raw/os75/en2010_324_64800.raw 2010-11-21 18:07:45,512 DEBUG quick_adcp Sun Nov 21 18:07:45 2010 running quick_adcp.py as follows: --cntfile /home/data/EN488/proc/os75bb/os75bb_qpy.cnt ----- adcpsect variables ------ afilebase a_en cbasename contour dbname a_en dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675, 700, 725, 750, 775] firstdepth 22 gridnum 80 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2010 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_en allow_reload True auto True beamangle 30 bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase EN488 cfgpath /home/data/EN488/proc/os75bb/config cntfile /home/data/EN488/proc/os75bb/os75bb_qpy.cnt commands None cruisename EN488 data_def vmadcp.def datadir /home/data/EN488/raw/os75 datafile_glob *.raw datatype uhdas dbname a_en dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/EN488/raw/os75/en2010_324_56253.raw', '/home/data/EN488/raw/os75/en2010_324_57600.raw', '/home/data/EN488/raw/os75/en2010_324_64800.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 22 fixfile a_en.gps hcorr_inst ashpaq2 head_func None help False hidedisplay True howto_lta False howto_ping False incremental False instclass os instname os75 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'bb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN488',... 'cfgpath' , '/home/data/EN488/proc/os75bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 mplplots ['temp', 'nav', 'refl', 'hcorr', 'wtcal', 'btcal'] nosave_editcfg 0 npycalc ['refsm'] num_persistence 24 numbins 128 orig_fixfile a_en.gps overview False pgmin 50 ping_headcorr True pingtype bb post_headcorr False printformats png proc_yearbase 2010 procdir os75bb progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/EN488/raw/os75/en2010_324_56253.raw', '/home/data/EN488/raw/os75/en2010_324_57600.raw', '/home/data/EN488/raw/os75/en2010_324_64800.raw'] setup_info False skip_avg True smfile a_en_refsm.asc steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2010 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-11-21 18:07:45,512 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2010-11-21 18:07:45,512 DEBUG quick_run scanning files for time ranges... 2010-11-21 18:07:45,512 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb/scan 2010-11-21 18:07:45,512 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/scan 2010-11-21 18:07:45,513 DEBUG quick_setup running python command "scanraw" 2010-11-21 18:07:45,513 DEBUG call_matlab --> clear all 2010-11-21 18:07:45,517 DEBUG call_matlab <-- >> 2010-11-21 18:07:45,517 DEBUG call_matlab --> close all 2010-11-21 18:07:45,531 DEBUG call_matlab <-- >> 2010-11-21 18:07:45,532 DEBUG call_matlab --> cd /home/data/EN488/proc/os75bb/scan 2010-11-21 18:07:45,533 DEBUG call_matlab <-- >> 2010-11-21 18:07:45,533 DEBUG call_matlab --> scan_tmp 2010-11-21 18:07:46,072 DEBUG call_matlab <-- getting config files from "/home/data/EN488/proc/os75bb/config" running "EN488_cfg.m" running "EN488_proc.m" writing scan info to a_en.scn >> 2010-11-21 18:07:46,072 DEBUG quick_run writing time range from a_en.scn to a_en.tr 2010-11-21 18:07:46,073 DEBUG quick_run getting scan time range 2010-11-21 18:07:46,073 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,073 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/scan 2010-11-21 18:07:46,073 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,073 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,074 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,074 DEBUG quick_subs start_end_time 2010/11/21 15:37:39 to 2010/11/21 18:03:25 2010-11-21 18:07:46,074 DEBUG quick_subs dd0: 324.651146 dd1: 324.752373 2010-11-21 18:07:46,075 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,075 DEBUG quick_adcp looking for database with adcpdb/a_en*.blk 2010-11-21 18:07:46,075 DEBUG quick_adcp database found: listing blocks 2010-11-21 18:07:46,075 DEBUG quick_subs removing a_endir.blk 2010-11-21 18:07:46,076 DEBUG quick_subs about to run mkblkdir 2010-11-21 18:07:46,076 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-11-21 18:07:46,076 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-11-21 18:07:46,085 DEBUG quick_subs database passes. 2010-11-21 18:07:46,086 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,086 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,086 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,086 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,086 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,086 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,087 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,087 DEBUG quick_subs dd0: 324.654653 dd1: 324.731250 2010-11-21 18:07:46,087 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,087 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,087 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,087 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,087 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,087 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,088 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,088 DEBUG quick_subs dd0: 324.654653 dd1: 324.731250 2010-11-21 18:07:46,088 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2010-11-21 18:07:46,088 DEBUG quick_adcp origdb_time_range is 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,088 DEBUG quick_adcp (324.654653 to 324.731250) 2010-11-21 18:07:46,088 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2010-11-21 18:07:46,089 DEBUG quick_subs getting current (remaining after deletion) database times 2010-11-21 18:07:46,089 DEBUG quick_subs ['adcpdb/a_endir.blk', 'adcpdb/a_en001.blk'] 2010-11-21 18:07:46,089 DEBUG quick_subs length is 2 2010-11-21 18:07:46,089 DEBUG quick_subs removing a_endir.blk 2010-11-21 18:07:46,089 DEBUG quick_subs about to run mkblkdir 2010-11-21 18:07:46,089 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-11-21 18:07:46,089 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-11-21 18:07:46,096 DEBUG quick_subs database passes. 2010-11-21 18:07:46,097 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,097 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,097 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,097 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,097 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,097 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,097 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,097 DEBUG quick_subs dd0: 324.654653 dd1: 324.731250 2010-11-21 18:07:46,098 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,098 DEBUG quick_subs reading time range 2010-11-21 18:07:46,098 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,098 DEBUG quick_subs dd0: 324.654653 dd1: 324.731250 2010-11-21 18:07:46,098 INFO quick_subs Sun Nov 21 18:07:46 2010 2010-11-21 18:07:46,098 INFO quick_subs checking database time range by listblk 2010-11-21 18:07:46,099 DEBUG quick_subs removing a_endir.blk 2010-11-21 18:07:46,099 DEBUG quick_subs about to run mkblkdir 2010-11-21 18:07:46,099 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-11-21 18:07:46,099 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-11-21 18:07:46,105 DEBUG quick_subs database passes. 2010-11-21 18:07:46,105 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,106 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,106 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,106 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,106 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,106 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,106 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,106 DEBUG quick_subs dd0: 324.654653 dd1: 324.731250 2010-11-21 18:07:46,107 INFO quick_subs found line /* 0 n= 23 a_en001.blk */ 2010/11/21 15:42:42 to 2010/11/21 17:33:00 2010-11-21 18:07:46,108 INFO quick_subs scan data start at 324.6511458 2010-11-21 18:07:46,108 INFO quick_subs scan time range: 2010/11/21 15:37:39 to 2010/11/21 18:03:25 2010-11-21 18:07:46,108 INFO quick_subs codasdb ends at 324.7312500 (2010/11/21 17:33:00) 2010-11-21 18:07:46,108 DEBUG quick_subs ... changed dirs, in /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,108 DEBUG quick_subs deleting these files: ['a_en001.blk'] 2010-11-21 18:07:46,108 DEBUG quick_subs getting current (remaining after deletion) database times 2010-11-21 18:07:46,108 DEBUG quick_subs [] 2010-11-21 18:07:46,109 DEBUG quick_subs length is 0 2010-11-21 18:07:46,109 DEBUG quick_subs codas database currently goes from 1970/01/01 01:00:00 to 1970/01/01 01:01:01 2010-11-21 18:07:46,109 DEBUG quick_subs (-10000.000000 to -10001.000000) 2010-11-21 18:07:46,109 DEBUG quick_subs 2010-11-21 18:07:46,109 DEBUG quick_subs found existing ens_blk files: 001 2010-11-21 18:07:46,109 DEBUG quick_subs checked: loaded blkstrs: [] 2010-11-21 18:07:46,110 DEBUG quick_subs checked: unloaded blkstrs: ['001'] 2010-11-21 18:07:46,110 DEBUG quick_subs first unloaded file is load/ens_blk001.cmd 2010-11-21 18:07:46,110 DEBUG quick_subs data goes from 2010/11/21 15:42:42 to 2010/11/21 18:03:25 2010-11-21 18:07:46,110 DEBUG quick_subs (324.654653 to 324.752373) 2010-11-21 18:07:46,110 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/EN488/raw/os75/en2010_324_56253.raw /home/data/EN488/raw/os75/en2010_324_57600.raw /home/data/EN488/raw/os75/en2010_324_64800.raw 2010-11-21 18:07:46,110 INFO quick_run Sun Nov 21 18:07:46 2010 2010-11-21 18:07:46,110 INFO quick_run about to load uhdas files 2010-11-21 18:07:46,110 INFO quick_run /home/data/EN488/raw/os75/en2010_324_56253.raw /home/data/EN488/raw/os75/en2010_324_57600.raw /home/data/EN488/raw/os75/en2010_324_64800.raw 2010-11-21 18:07:46,110 DEBUG quick_setup load/ldcodas.tmp exists 2010-11-21 18:07:46,111 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,111 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/load 2010-11-21 18:07:46,111 DEBUG quick_setup running python command "ldcodas" 2010-11-21 18:07:46,111 DEBUG quick_subs in /home/data/EN488/proc/os75bb/load 2010-11-21 18:07:46,111 DEBUG quick_subs found block strings: [] 2010-11-21 18:07:46,111 DEBUG quick_subs found cmd blk strings: ['001'] 2010-11-21 18:07:46,111 DEBUG quick_subs starttime is 2010/11/21 15:42:42 2010-11-21 18:07:46,112 DEBUG quick_subs RESETTING thisload_time_range 2010-11-21 18:07:46,112 DEBUG quick_subs time range of data to be loaded: 2010/11/21 15:42:42 to 2010/11/21 18:03:25 2010-11-21 18:07:46,112 DEBUG quick_subs data startdd 324.654653 data enddd 324.752373 2010-11-21 18:07:46,112 DEBUG quick_subs about to load from these cmd files ['ens_blk001.cmd'] 2010-11-21 18:07:46,112 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_en DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2010 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk001.cmd 2010-11-21 18:07:46,112 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2010-11-21 18:07:46,124 DEBUG quick_subs removing a_endir.blk 2010-11-21 18:07:46,124 DEBUG quick_subs about to run mkblkdir 2010-11-21 18:07:46,124 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-11-21 18:07:46,124 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-11-21 18:07:46,131 DEBUG quick_subs database passes. 2010-11-21 18:07:46,131 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,131 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,131 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,131 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,131 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,132 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,132 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 18:03:01 2010-11-21 18:07:46,132 DEBUG quick_subs dd0: 324.654653 dd1: 324.752095 2010-11-21 18:07:46,132 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-11-21 18:07:46,132 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,132 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,132 DEBUG quick_setup running python command "get_time_range" 2010-11-21 18:07:46,132 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-11-21 18:07:46,133 DEBUG quick_subs extracting time range 2010-11-21 18:07:46,133 DEBUG quick_subs start_end_time 2010/11/21 15:42:42 to 2010/11/21 18:03:01 2010-11-21 18:07:46,133 DEBUG quick_subs dd0: 324.654653 dd1: 324.752095 2010-11-21 18:07:46,133 DEBUG quick_adcp loaded_time_range is 2010/11/21 15:42:42 to 2010/11/21 18:03:01 2010-11-21 18:07:46,133 DEBUG quick_adcp (324.654653 to 324.752095) 2010-11-21 18:07:46,133 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,133 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/adcpdb 2010-11-21 18:07:46,133 DEBUG quick_setup running python command "lst_conf" 2010-11-21 18:07:46,133 DEBUG quick_subs dbname: a_en output: a_en.cnh time_ranges: all 2010-11-21 18:07:46,134 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2010-11-21 18:07:46,138 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2010-11-21 18:07:46,138 DEBUG quick_run executing commands from /home/data/EN488/proc/os75bb/edit 2010-11-21 18:07:46,138 DEBUG quick_run setup.m exists. not replacing 2010-11-21 18:07:46,138 DEBUG quick_run asetup.m exists. not replacing 2010-11-21 18:07:46,138 DEBUG quick_run aflagit_setup.m exists. not replacing 2010-11-21 18:07:46,138 DEBUG quick_run ------------ step 4: run setflags ------------- 2010-11-21 18:07:46,138 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,139 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/edit 2010-11-21 18:07:46,139 DEBUG quick_setup running python command "setflags" 2010-11-21 18:07:46,139 DEBUG quick_subs dbname: ../adcpdb/a_en pg_min: 50 set_range_bit time_ranges: all 2010-11-21 18:07:46,139 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-11-21 18:07:46,143 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2010-11-21 18:07:46,143 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,143 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:46,144 DEBUG quick_setup running python command "catnav" 2010-11-21 18:07:46,144 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2010-11-21 18:07:46,144 DEBUG quick_run hcorr_inst is ashpaq2 2010-11-21 18:07:46,144 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2010-11-21 18:07:46,144 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,145 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/rotate 2010-11-21 18:07:46,145 DEBUG quick_setup running python command "lst_hdg" 2010-11-21 18:07:46,145 DEBUG quick_subs dbname: ../../adcpdb/a_en output: scn.hdg step_size= 1 year_base= 2010 time_ranges: all 2010-11-21 18:07:46,145 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2010-11-21 18:07:46,149 DEBUG quick_run no available heading correction function specified 2010-11-21 18:07:46,149 DEBUG quick_run ------------ step 7: rotate ------------- 2010-11-21 18:07:46,150 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,150 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/rotate 2010-11-21 18:07:46,150 DEBUG quick_setup running python command "rotated" 2010-11-21 18:07:46,150 DEBUG quick_subs last rotated time from log file: 2010/11/21 17:33:16 2010-11-21 18:07:46,150 DEBUG quick_subs time range of currently loaded data: 2010/11/21 15:42:42 to 2010/11/21 18:03:01 2010-11-21 18:07:46,150 DEBUG quick_subs (324.654653 to 324.752095) 2010-11-21 18:07:46,150 DEBUG quick_setup cal/rotate/rotate.tmp exists 2010-11-21 18:07:46,151 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,151 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/rotate 2010-11-21 18:07:46,151 DEBUG quick_setup running python command "rotate" 2010-11-21 18:07:46,151 DEBUG quick_subs DB_NAME: ../../adcpdb/a_en LOG_FILE: rotate.log TIME_RANGE: 2010/11/21 15:42:42 to 2010/11/21 18:03:25 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2010 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2010-11-21 18:07:46,151 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2010-11-21 18:07:46,155 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-11-21 18:07:46,156 DEBUG quick_setup nav/as_nav.tmp exists 2010-11-21 18:07:46,156 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,156 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:46,156 DEBUG quick_setup running python command "as_nav" 2010-11-21 18:07:46,156 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/11/21 15:42:42 to 2010/11/21 18:03:01 /* the whole time range */ 2010-11-21 18:07:46,156 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-11-21 18:07:46,161 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-11-21 18:07:46,161 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,161 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:46,161 DEBUG quick_setup running python command "refabs" 2010-11-21 18:07:46,161 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-11-21 18:07:46,162 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-11-21 18:07:46,166 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-11-21 18:07:46,166 DEBUG quick_setup nav/smoothr.tmp exists 2010-11-21 18:07:46,166 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,166 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:46,166 DEBUG quick_setup running python command "smoothr" 2010-11-21 18:07:46,166 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-11-21 18:07:46,166 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-11-21 18:07:46,173 DEBUG quick_adcp about to run numpy refsm 2010-11-21 18:07:46,173 DEBUG quick_npy Starting: refsm 2010-11-21 18:07:46,180 INFO nav dtmin = -0.48 dtmax = 0.50 2010-11-21 18:07:46,224 DEBUG quick_npy Ending: refsm 2010-11-21 18:07:46,224 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-11-21 18:07:46,224 DEBUG quick_setup nav/putnav.tmp exists 2010-11-21 18:07:46,225 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,225 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:46,225 DEBUG quick_setup running python command "putnav" 2010-11-21 18:07:46,225 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: a_en_refsm.asc year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-11-21 18:07:46,225 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-11-21 18:07:46,229 DEBUG quick_adcp plotting navigation 2010-11-21 18:07:46,230 DEBUG quick_mpl Starting plot: nav 2010-11-21 18:07:46,542 DEBUG quick_mpl Ending plot: nav 2010-11-21 18:07:46,542 DEBUG quick_mpl Starting plot: refl 2010-11-21 18:07:46,545 DEBUG quick_mplplots found 0.087007 days of data 2010-11-21 18:07:46,545 DEBUG quick_mplplots start day is 324.000000 2010-11-21 18:07:46,545 DEBUG quick_mplplots figures with 2.000000 days per page 2010-11-21 18:07:46,545 DEBUG quick_mplplots printing 1 pages 2010-11-21 18:07:46,545 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2010-11-21 18:07:46,545 INFO quick_mplplots startdd is 324.0 2010-11-21 18:07:46,545 INFO quick_mplplots dt is 2.0 2010-11-21 18:07:46,879 DEBUG quick_mpl Ending plot: refl 2010-11-21 18:07:46,879 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2010-11-21 18:07:46,879 DEBUG quick_run find profile flags ------------ *** ------------- 2010-11-21 18:07:46,879 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:46,879 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/edit 2010-11-21 18:07:46,879 DEBUG quick_setup running python command "aedit" 2010-11-21 18:07:48,091 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2010-11-21 18:07:48,091 DEBUG quick_run starting in: /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,091 DEBUG quick_run executing commands from: edit 2010-11-21 18:07:48,093 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_en abadprf_tmp.asc 2010-11-21 18:07:48,098 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_en abadbin_tmp.asc 2010-11-21 18:07:48,103 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_en 30 2010-11-21 18:07:48,107 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-11-21 18:07:48,113 DEBUG quick_run changing directories back to /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,113 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2010-11-21 18:07:48,113 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-11-21 18:07:48,113 DEBUG quick_setup nav/as_nav.tmp exists 2010-11-21 18:07:48,114 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,114 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:48,114 DEBUG quick_setup running python command "as_nav" 2010-11-21 18:07:48,114 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/11/21 15:42:42 to 2010/11/21 18:03:01 /* the whole time range */ 2010-11-21 18:07:48,114 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-11-21 18:07:48,120 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-11-21 18:07:48,120 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,120 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:48,120 DEBUG quick_setup running python command "refabs" 2010-11-21 18:07:48,121 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-11-21 18:07:48,121 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-11-21 18:07:48,126 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-11-21 18:07:48,127 DEBUG quick_setup nav/smoothr.tmp exists 2010-11-21 18:07:48,127 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,127 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:48,127 DEBUG quick_setup running python command "smoothr" 2010-11-21 18:07:48,127 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-11-21 18:07:48,127 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-11-21 18:07:48,134 DEBUG quick_adcp running refsm 2010-11-21 18:07:48,135 DEBUG quick_npy Starting: refsm 2010-11-21 18:07:48,143 INFO nav dtmin = -0.48 dtmax = 0.50 2010-11-21 18:07:48,154 DEBUG quick_npy Ending: refsm 2010-11-21 18:07:48,154 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-11-21 18:07:48,154 DEBUG quick_setup nav/putnav.tmp exists 2010-11-21 18:07:48,154 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,155 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:48,155 DEBUG quick_setup running python command "putnav" 2010-11-21 18:07:48,155 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: a_en_refsm.asc year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-11-21 18:07:48,155 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-11-21 18:07:48,161 DEBUG quick_mpl Starting plot: nav 2010-11-21 18:07:48,487 DEBUG quick_mpl Ending plot: nav 2010-11-21 18:07:48,487 DEBUG quick_mpl Starting plot: refl 2010-11-21 18:07:48,490 DEBUG quick_mplplots found 0.087007 days of data 2010-11-21 18:07:48,490 DEBUG quick_mplplots start day is 324.000000 2010-11-21 18:07:48,490 DEBUG quick_mplplots figures with 2.000000 days per page 2010-11-21 18:07:48,490 DEBUG quick_mplplots printing 1 pages 2010-11-21 18:07:48,490 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2010-11-21 18:07:48,490 INFO quick_mplplots startdd is 324.0 2010-11-21 18:07:48,491 INFO quick_mplplots dt is 2.0 2010-11-21 18:07:48,824 DEBUG quick_mpl Ending plot: refl 2010-11-21 18:07:48,824 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2010-11-21 18:07:48,824 DEBUG quick_setup edit/lst_temp.tmp exists 2010-11-21 18:07:48,824 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:48,824 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/edit 2010-11-21 18:07:48,825 DEBUG quick_setup running python command "lst_temp" 2010-11-21 18:07:48,825 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en.tem step_size= 1 year_base= 2010 time_ranges: all 2010-11-21 18:07:48,825 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2010-11-21 18:07:48,830 DEBUG quick_mpl Starting plot: temp 2010-11-21 18:07:48,831 DEBUG quick_mplplots plotting 29 points 2010-11-21 18:07:49,070 DEBUG quick_mpl Ending plot: temp 2010-11-21 18:07:49,070 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2010-11-21 18:07:49,070 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2010-11-21 18:07:49,070 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,070 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/botmtrk 2010-11-21 18:07:49,070 DEBUG quick_setup running python command "lst_btrk" 2010-11-21 18:07:49,070 DEBUG quick_subs dbname: ../../adcpdb/a_en output: a_en.btm step_size= 1 year_base= 2010 time_ranges: 2010/11/21 15:42:42 to 2010/11/21 18:03:01 /* whole time range */ 2010-11-21 18:07:49,071 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2010-11-21 18:07:49,075 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2010-11-21 18:07:49,075 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,076 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/botmtrk 2010-11-21 18:07:49,076 DEBUG quick_setup running python command "refabsbt" 2010-11-21 18:07:49,076 DEBUG quick_subs fix_file_type: simple reference_file: a_en.btm fix_file: ../../nav/a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 60 2010-11-21 18:07:49,076 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2010-11-21 18:07:49,080 DEBUG quick_mpl Starting plot: btcal 2010-11-21 18:07:49,081 DEBUG quick_mplplots No data in a_en.btm 2010-11-21 18:07:49,081 DEBUG quick_mplplots Returning from Btplot with no output 2010-11-21 18:07:49,081 DEBUG quick_mpl Ending plot: btcal 2010-11-21 18:07:49,081 DEBUG quick_setup nav/as_nav.tmp exists 2010-11-21 18:07:49,081 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,081 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/nav 2010-11-21 18:07:49,081 DEBUG quick_setup running python command "as_nav" 2010-11-21 18:07:49,082 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/11/21 15:42:42 to 2010/11/21 18:03:01 /* the whole time range */ 2010-11-21 18:07:49,082 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-11-21 18:07:49,087 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2010-11-21 18:07:49,087 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,087 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/cal/watertrk 2010-11-21 18:07:49,088 DEBUG quick_setup running python command "timslip" 2010-11-21 18:07:49,088 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_en.gps reference_file: ../../nav/a_en.nav output_file: a_en_7.cal year_base= 2010 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2010-11-21 18:07:49,088 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2010-11-21 18:07:49,092 DEBUG quick_mpl Starting plot: wtcal 2010-11-21 18:07:49,093 DEBUG quick_mplplots Found 0 calibration points 2010-11-21 18:07:49,094 DEBUG quick_mplplots Only 0 valid points found; quitting 2010-11-21 18:07:49,094 DEBUG quick_mpl Ending plot: wtcal 2010-11-21 18:07:49,094 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2010-11-21 18:07:49,094 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,094 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/vector 2010-11-21 18:07:49,094 DEBUG quick_setup running python command "timegrid" 2010-11-21 18:07:49,094 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-11-21 18:07:49,099 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,099 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/vector 2010-11-21 18:07:49,099 DEBUG quick_setup running python command "as_vect" 2010-11-21 18:07:49,099 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2010-11-21 18:07:49,105 DEBUG quick_asect done making vector matfiles 2010-11-21 18:07:49,105 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,105 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/contour 2010-11-21 18:07:49,105 DEBUG quick_setup running python command "timegrid" 2010-11-21 18:07:49,105 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-11-21 18:07:49,110 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,110 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/contour 2010-11-21 18:07:49,110 DEBUG quick_setup running python command "as_cont" 2010-11-21 18:07:49,110 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2010-11-21 18:07:49,116 DEBUG quick_setup starting in /home/data/EN488/proc/os75bb 2010-11-21 18:07:49,116 DEBUG quick_setup executing commands from /home/data/EN488/proc/os75bb/contour 2010-11-21 18:07:49,116 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_en 2010-11-21 18:07:49,124 DEBUG quick_asect done running getmat with "allbins" 2010-11-21 18:07:49,151 INFO root copying NOFIG to /home/adcp/www/figures/os75bb_hcorr_plot.png 2010-11-21 18:07:49,151 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/os75bb_hcorr_plot_thumb.png 2010-11-21 18:07:49,151 DEBUG root matfile is contour/contour_uv.mat 2010-11-21 18:07:49,151 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/os75bb_cont_uv.mat 2010-11-21 18:07:49,151 DEBUG root matfile is vector/vector_uv.mat 2010-11-21 18:07:49,151 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/os75bb_vect_uv.mat 2010-11-21 18:07:49,152 DEBUG root matfile is contour/contour_xy.mat 2010-11-21 18:07:49,152 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/os75bb_cont_xy.mat 2010-11-21 18:07:49,152 DEBUG root matfile is vector/vector_xy.mat 2010-11-21 18:07:49,152 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/os75bb_vect_xy.mat 2010-11-21 18:07:49,152 DEBUG root about to copy file edit/a_en.tem to /home/adcp/www/data/os75bb_temp.asc 2010-11-21 18:07:49,152 INFO root copying edit/a_en.tem to /home/adcp/www/data/os75bb_temp.asc 2010-11-21 18:07:49,152 INFO root Ending quick_adcp.py 2010-11-21 18:07:49,204 DEBUG quick_setup killed matlab engine