2010-10-23 12:10:53,131 DEBUG root about to write control file parameters to --yearbase 2010 --pingtype nb --cfgbase EN486 --cruisename EN486 --instclass os --instname os75 --dbname a_en --datatype uhdas --datadir /home/data/EN486/raw/os75 --cfgpath /home/data/EN486/proc/os75nb/config --ens_len 300 --ping_headcor --hcorr_inst ashpaq2 --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto --npycalc all --mplplots all 2010-10-23 12:10:53,131 DEBUG quick_adcp sys.argv = /home/currents/programs/uhdas/scripts/run_quick.py -d os75nb --npycalc all --mplplots all 2010-10-23 12:10:53,133 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ adcpcal aedit aflagit_setup as_cont as_nav as_vect asetup ashrot btcaluv catnav check_opts cleanup copy_ensfile ddtime def_qlist get_asvars get_cmd_timerange get_data2load_timerange get_filelist get_gyrodh get_headcorrstats get_lstblk_tr get_matcfgstr get_remaining_times get_time_range getmat ldcodas list2matcell llgrid loadens loadhdss loadlta loadping loaduh lst_btrk lst_conf lst_hdg lst_temp mpltest opts overlapping plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp plottemp_mpl plotwtcal_mpl print_attlog putnav refabs refabsbt refplot refsm rotate rotated run_adcpsect run_applyedit run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_listblocks run_loaddata run_lstconfig run_lsttemp run_matfiles run_plotter run_putnav run_rawsetup run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scandata run_setflags run_smoothr run_updategbin run_xducerxy scanping scanraw setflags smoothr startmatlab timegrid timslip ubprint update_gbin user_defined_headfunc xducerxy zapsetup 2010-10-23 12:10:53,133 DEBUG quick_adcp progdir = /home/currents/programs 2010-10-23 12:10:53,133 DEBUG quick_adcp binos = lnx 2010-10-23 12:10:53,133 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2010-10-23 12:10:53,133 DEBUG quick_setup yearbase is 2010, proc_yearbase is 2010 2010-10-23 12:10:53,133 DEBUG quick_setup numpy calculations to run: refsm 2010-10-23 12:10:53,133 DEBUG quick_setup mplplots to run: temp, nav, refl, hcorr, wtcal, btcal 2010-10-23 12:10:53,134 DEBUG quick_setup processing data logged with uhdas: 2010-10-23 12:10:53,134 DEBUG quick_setup datatype is uhdas 2010-10-23 12:10:53,134 DEBUG quick_setup pingtype is nb 2010-10-23 12:10:53,134 DEBUG quick_setup instclass is os 2010-10-23 12:10:53,134 DEBUG quick_setup no post-processing heading correction will be used 2010-10-23 12:10:53,134 DEBUG quick_setup transducer depth set in *_cfg.m file 2010-10-23 12:10:53,144 DEBUG quick_setup found (in edit/asetup.m): 2010-10-23 12:10:53,144 DEBUG quick_setup config.beamangle is 30 2010-10-23 12:10:53,144 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'nb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN486',... 'cfgpath' , '/home/data/EN486/proc/os75nb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2010-10-23 12:10:53,145 DEBUG quick_setup ------- starting Matlab engine ------- 2010-10-23 12:10:53,145 DEBUG quick_setup ['/home/currents/programs/matlab'] 2010-10-23 12:10:53,147 DEBUG call_matlab starting to wait for initial prompt 2010-10-23 12:10:53,745 DEBUG call_matlab received initial prompt 2010-10-23 12:10:53,988 DEBUG quick_adcp cwd is /home/data/EN486/proc/os75nb about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-10-23 12:10:53,989 DEBUG quick_adcp original fix file is a_en.gps 2010-10-23 12:10:53,989 DEBUG quick_adcp smoothed nav file is a_en_refsm.asc 2010-10-23 12:10:53,989 DEBUG quick_asect extracting matlab files for os75, nb pings 2010-10-23 12:10:54,006 DEBUG quick_subs found 121 files using wildcard expansion from "/home/data/EN486/raw/os75/*.raw" 2010-10-23 12:10:54,006 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/EN486/raw/os75/en2010_285_49189.raw /home/data/EN486/raw/os75/en2010_285_50400.raw /home/data/EN486/raw/os75/en2010_285_57600.raw /home/data/EN486/raw/os75/en2010_285_64800.raw /home/data/EN486/raw/os75/en2010_285_72000.raw /home/data/EN486/raw/os75/en2010_285_79200.raw /home/data/EN486/raw/os75/en2010_286_00000.raw /home/data/EN486/raw/os75/en2010_286_07200.raw /home/data/EN486/raw/os75/en2010_286_14400.raw /home/data/EN486/raw/os75/en2010_286_21600.raw /home/data/EN486/raw/os75/en2010_286_28800.raw /home/data/EN486/raw/os75/en2010_286_36000.raw /home/data/EN486/raw/os75/en2010_286_43200.raw /home/data/EN486/raw/os75/en2010_286_50400.raw /home/data/EN486/raw/os75/en2010_286_57600.raw /home/data/EN486/raw/os75/en2010_286_64800.raw /home/data/EN486/raw/os75/en2010_286_72000.raw /home/data/EN486/raw/os75/en2010_286_79200.raw /home/data/EN486/raw/os75/en2010_287_00000.raw /home/data/EN486/raw/os75/en2010_287_07200.raw /home/data/EN486/raw/os75/en2010_287_14400.raw /home/data/EN486/raw/os75/en2010_287_21600.raw /home/data/EN486/raw/os75/en2010_287_28800.raw /home/data/EN486/raw/os75/en2010_287_36000.raw /home/data/EN486/raw/os75/en2010_287_43200.raw /home/data/EN486/raw/os75/en2010_287_50400.raw /home/data/EN486/raw/os75/en2010_287_57600.raw /home/data/EN486/raw/os75/en2010_287_64800.raw /home/data/EN486/raw/os75/en2010_287_72000.raw /home/data/EN486/raw/os75/en2010_287_79200.raw /home/data/EN486/raw/os75/en2010_288_00000.raw /home/data/EN486/raw/os75/en2010_288_07200.raw /home/data/EN486/raw/os75/en2010_288_14400.raw /home/data/EN486/raw/os75/en2010_288_21600.raw /home/data/EN486/raw/os75/en2010_288_28800.raw /home/data/EN486/raw/os75/en2010_288_36000.raw /home/data/EN486/raw/os75/en2010_288_43200.raw /home/data/EN486/raw/os75/en2010_288_50400.raw /home/data/EN486/raw/os75/en2010_288_57600.raw /home/data/EN486/raw/os75/en2010_288_64800.raw /home/data/EN486/raw/os75/en2010_288_72000.raw /home/data/EN486/raw/os75/en2010_288_79200.raw /home/data/EN486/raw/os75/en2010_289_00000.raw /home/data/EN486/raw/os75/en2010_289_07200.raw /home/data/EN486/raw/os75/en2010_289_14400.raw /home/data/EN486/raw/os75/en2010_289_21600.raw /home/data/EN486/raw/os75/en2010_289_28800.raw /home/data/EN486/raw/os75/en2010_289_36000.raw /home/data/EN486/raw/os75/en2010_289_43200.raw /home/data/EN486/raw/os75/en2010_289_50400.raw /home/data/EN486/raw/os75/en2010_289_57600.raw /home/data/EN486/raw/os75/en2010_289_64800.raw /home/data/EN486/raw/os75/en2010_289_72000.raw /home/data/EN486/raw/os75/en2010_289_79200.raw /home/data/EN486/raw/os75/en2010_290_00000.raw /home/data/EN486/raw/os75/en2010_290_07200.raw /home/data/EN486/raw/os75/en2010_290_14400.raw /home/data/EN486/raw/os75/en2010_290_21600.raw /home/data/EN486/raw/os75/en2010_290_28800.raw /home/data/EN486/raw/os75/en2010_290_36000.raw /home/data/EN486/raw/os75/en2010_290_43200.raw /home/data/EN486/raw/os75/en2010_290_50400.raw /home/data/EN486/raw/os75/en2010_290_57600.raw /home/data/EN486/raw/os75/en2010_290_64800.raw /home/data/EN486/raw/os75/en2010_290_72000.raw /home/data/EN486/raw/os75/en2010_290_79200.raw /home/data/EN486/raw/os75/en2010_291_00000.raw /home/data/EN486/raw/os75/en2010_291_07200.raw /home/data/EN486/raw/os75/en2010_291_14400.raw /home/data/EN486/raw/os75/en2010_291_21600.raw /home/data/EN486/raw/os75/en2010_291_28800.raw /home/data/EN486/raw/os75/en2010_291_36000.raw /home/data/EN486/raw/os75/en2010_291_43200.raw /home/data/EN486/raw/os75/en2010_291_50400.raw /home/data/EN486/raw/os75/en2010_291_57600.raw /home/data/EN486/raw/os75/en2010_291_64800.raw /home/data/EN486/raw/os75/en2010_291_72000.raw /home/data/EN486/raw/os75/en2010_291_79200.raw /home/data/EN486/raw/os75/en2010_292_00000.raw /home/data/EN486/raw/os75/en2010_292_07200.raw /home/data/EN486/raw/os75/en2010_292_14400.raw /home/data/EN486/raw/os75/en2010_292_21600.raw /home/data/EN486/raw/os75/en2010_292_28800.raw /home/data/EN486/raw/os75/en2010_292_36000.raw /home/data/EN486/raw/os75/en2010_292_43200.raw /home/data/EN486/raw/os75/en2010_292_50400.raw /home/data/EN486/raw/os75/en2010_292_57600.raw /home/data/EN486/raw/os75/en2010_292_64800.raw /home/data/EN486/raw/os75/en2010_292_72000.raw /home/data/EN486/raw/os75/en2010_292_79200.raw /home/data/EN486/raw/os75/en2010_293_00000.raw /home/data/EN486/raw/os75/en2010_293_07200.raw /home/data/EN486/raw/os75/en2010_293_14400.raw /home/data/EN486/raw/os75/en2010_293_21600.raw /home/data/EN486/raw/os75/en2010_293_28800.raw /home/data/EN486/raw/os75/en2010_293_36000.raw /home/data/EN486/raw/os75/en2010_293_43200.raw /home/data/EN486/raw/os75/en2010_293_50400.raw /home/data/EN486/raw/os75/en2010_293_57600.raw /home/data/EN486/raw/os75/en2010_293_64800.raw /home/data/EN486/raw/os75/en2010_293_72000.raw /home/data/EN486/raw/os75/en2010_293_79200.raw /home/data/EN486/raw/os75/en2010_294_00000.raw /home/data/EN486/raw/os75/en2010_294_07200.raw /home/data/EN486/raw/os75/en2010_294_14400.raw /home/data/EN486/raw/os75/en2010_294_21600.raw /home/data/EN486/raw/os75/en2010_294_28800.raw /home/data/EN486/raw/os75/en2010_294_36000.raw /home/data/EN486/raw/os75/en2010_294_43200.raw /home/data/EN486/raw/os75/en2010_294_50400.raw /home/data/EN486/raw/os75/en2010_294_57600.raw /home/data/EN486/raw/os75/en2010_294_64800.raw /home/data/EN486/raw/os75/en2010_294_72000.raw /home/data/EN486/raw/os75/en2010_294_79200.raw /home/data/EN486/raw/os75/en2010_295_00000.raw /home/data/EN486/raw/os75/en2010_295_07200.raw /home/data/EN486/raw/os75/en2010_295_14400.raw /home/data/EN486/raw/os75/en2010_295_21600.raw /home/data/EN486/raw/os75/en2010_295_28800.raw /home/data/EN486/raw/os75/en2010_295_36000.raw /home/data/EN486/raw/os75/en2010_295_43200.raw 2010-10-23 12:10:54,007 DEBUG quick_adcp LASTFILES invoked. using only 121 files from end of filelist 2010-10-23 12:10:54,007 DEBUG quick_adcp using delblks = 1 2010-10-23 12:10:54,007 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/EN486/raw/os75/en2010_285_49189.raw /home/data/EN486/raw/os75/en2010_285_50400.raw /home/data/EN486/raw/os75/en2010_285_57600.raw /home/data/EN486/raw/os75/en2010_285_64800.raw /home/data/EN486/raw/os75/en2010_285_72000.raw /home/data/EN486/raw/os75/en2010_285_79200.raw /home/data/EN486/raw/os75/en2010_286_00000.raw /home/data/EN486/raw/os75/en2010_286_07200.raw /home/data/EN486/raw/os75/en2010_286_14400.raw /home/data/EN486/raw/os75/en2010_286_21600.raw /home/data/EN486/raw/os75/en2010_286_28800.raw /home/data/EN486/raw/os75/en2010_286_36000.raw /home/data/EN486/raw/os75/en2010_286_43200.raw /home/data/EN486/raw/os75/en2010_286_50400.raw /home/data/EN486/raw/os75/en2010_286_57600.raw /home/data/EN486/raw/os75/en2010_286_64800.raw /home/data/EN486/raw/os75/en2010_286_72000.raw /home/data/EN486/raw/os75/en2010_286_79200.raw /home/data/EN486/raw/os75/en2010_287_00000.raw /home/data/EN486/raw/os75/en2010_287_07200.raw /home/data/EN486/raw/os75/en2010_287_14400.raw /home/data/EN486/raw/os75/en2010_287_21600.raw /home/data/EN486/raw/os75/en2010_287_28800.raw /home/data/EN486/raw/os75/en2010_287_36000.raw /home/data/EN486/raw/os75/en2010_287_43200.raw /home/data/EN486/raw/os75/en2010_287_50400.raw /home/data/EN486/raw/os75/en2010_287_57600.raw /home/data/EN486/raw/os75/en2010_287_64800.raw /home/data/EN486/raw/os75/en2010_287_72000.raw /home/data/EN486/raw/os75/en2010_287_79200.raw /home/data/EN486/raw/os75/en2010_288_00000.raw /home/data/EN486/raw/os75/en2010_288_07200.raw /home/data/EN486/raw/os75/en2010_288_14400.raw /home/data/EN486/raw/os75/en2010_288_21600.raw /home/data/EN486/raw/os75/en2010_288_28800.raw /home/data/EN486/raw/os75/en2010_288_36000.raw /home/data/EN486/raw/os75/en2010_288_43200.raw /home/data/EN486/raw/os75/en2010_288_50400.raw /home/data/EN486/raw/os75/en2010_288_57600.raw /home/data/EN486/raw/os75/en2010_288_64800.raw /home/data/EN486/raw/os75/en2010_288_72000.raw /home/data/EN486/raw/os75/en2010_288_79200.raw /home/data/EN486/raw/os75/en2010_289_00000.raw /home/data/EN486/raw/os75/en2010_289_07200.raw /home/data/EN486/raw/os75/en2010_289_14400.raw /home/data/EN486/raw/os75/en2010_289_21600.raw /home/data/EN486/raw/os75/en2010_289_28800.raw /home/data/EN486/raw/os75/en2010_289_36000.raw /home/data/EN486/raw/os75/en2010_289_43200.raw /home/data/EN486/raw/os75/en2010_289_50400.raw /home/data/EN486/raw/os75/en2010_289_57600.raw /home/data/EN486/raw/os75/en2010_289_64800.raw /home/data/EN486/raw/os75/en2010_289_72000.raw /home/data/EN486/raw/os75/en2010_289_79200.raw /home/data/EN486/raw/os75/en2010_290_00000.raw /home/data/EN486/raw/os75/en2010_290_07200.raw /home/data/EN486/raw/os75/en2010_290_14400.raw /home/data/EN486/raw/os75/en2010_290_21600.raw /home/data/EN486/raw/os75/en2010_290_28800.raw /home/data/EN486/raw/os75/en2010_290_36000.raw /home/data/EN486/raw/os75/en2010_290_43200.raw /home/data/EN486/raw/os75/en2010_290_50400.raw /home/data/EN486/raw/os75/en2010_290_57600.raw /home/data/EN486/raw/os75/en2010_290_64800.raw /home/data/EN486/raw/os75/en2010_290_72000.raw /home/data/EN486/raw/os75/en2010_290_79200.raw /home/data/EN486/raw/os75/en2010_291_00000.raw /home/data/EN486/raw/os75/en2010_291_07200.raw /home/data/EN486/raw/os75/en2010_291_14400.raw /home/data/EN486/raw/os75/en2010_291_21600.raw /home/data/EN486/raw/os75/en2010_291_28800.raw /home/data/EN486/raw/os75/en2010_291_36000.raw /home/data/EN486/raw/os75/en2010_291_43200.raw /home/data/EN486/raw/os75/en2010_291_50400.raw /home/data/EN486/raw/os75/en2010_291_57600.raw /home/data/EN486/raw/os75/en2010_291_64800.raw /home/data/EN486/raw/os75/en2010_291_72000.raw /home/data/EN486/raw/os75/en2010_291_79200.raw /home/data/EN486/raw/os75/en2010_292_00000.raw /home/data/EN486/raw/os75/en2010_292_07200.raw /home/data/EN486/raw/os75/en2010_292_14400.raw /home/data/EN486/raw/os75/en2010_292_21600.raw /home/data/EN486/raw/os75/en2010_292_28800.raw /home/data/EN486/raw/os75/en2010_292_36000.raw /home/data/EN486/raw/os75/en2010_292_43200.raw /home/data/EN486/raw/os75/en2010_292_50400.raw /home/data/EN486/raw/os75/en2010_292_57600.raw /home/data/EN486/raw/os75/en2010_292_64800.raw /home/data/EN486/raw/os75/en2010_292_72000.raw /home/data/EN486/raw/os75/en2010_292_79200.raw /home/data/EN486/raw/os75/en2010_293_00000.raw /home/data/EN486/raw/os75/en2010_293_07200.raw /home/data/EN486/raw/os75/en2010_293_14400.raw /home/data/EN486/raw/os75/en2010_293_21600.raw /home/data/EN486/raw/os75/en2010_293_28800.raw /home/data/EN486/raw/os75/en2010_293_36000.raw /home/data/EN486/raw/os75/en2010_293_43200.raw /home/data/EN486/raw/os75/en2010_293_50400.raw /home/data/EN486/raw/os75/en2010_293_57600.raw /home/data/EN486/raw/os75/en2010_293_64800.raw /home/data/EN486/raw/os75/en2010_293_72000.raw /home/data/EN486/raw/os75/en2010_293_79200.raw /home/data/EN486/raw/os75/en2010_294_00000.raw /home/data/EN486/raw/os75/en2010_294_07200.raw /home/data/EN486/raw/os75/en2010_294_14400.raw /home/data/EN486/raw/os75/en2010_294_21600.raw /home/data/EN486/raw/os75/en2010_294_28800.raw /home/data/EN486/raw/os75/en2010_294_36000.raw /home/data/EN486/raw/os75/en2010_294_43200.raw /home/data/EN486/raw/os75/en2010_294_50400.raw /home/data/EN486/raw/os75/en2010_294_57600.raw /home/data/EN486/raw/os75/en2010_294_64800.raw /home/data/EN486/raw/os75/en2010_294_72000.raw /home/data/EN486/raw/os75/en2010_294_79200.raw /home/data/EN486/raw/os75/en2010_295_00000.raw /home/data/EN486/raw/os75/en2010_295_07200.raw /home/data/EN486/raw/os75/en2010_295_14400.raw /home/data/EN486/raw/os75/en2010_295_21600.raw /home/data/EN486/raw/os75/en2010_295_28800.raw /home/data/EN486/raw/os75/en2010_295_36000.raw /home/data/EN486/raw/os75/en2010_295_43200.raw 2010-10-23 12:10:54,008 DEBUG quick_adcp Sat Oct 23 12:10:54 2010 running quick_adcp.py as follows: --cntfile /home/data/EN486/proc/os75nb/os75nb_qpy.cnt ----- adcpsect variables ------ afilebase a_en cbasename contour dbname a_en dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300, 325, 350, 375, 400, 425, 450, 475, 500, 525, 550, 575, 600, 625, 650, 675, 700, 725, 750, 775] firstdepth 30 gridnum 80 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2010 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_en allow_reload True auto True beamangle 30 bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase EN486 cfgpath /home/data/EN486/proc/os75nb/config cntfile /home/data/EN486/proc/os75nb/os75nb_qpy.cnt commands None cruisename EN486 data_def vmadcp.def datadir /home/data/EN486/raw/os75 datafile_glob *.raw datatype uhdas dbname a_en dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/EN486/raw/os75/en2010_285_49189.raw', '/home/data/EN486/raw/os75/en2010_285_50400.raw', '/home/data/EN486/raw/os75/en2010_285_57600.raw', '/home/data/EN486/raw/os75/en2010_285_64800.raw', '/home/data/EN486/raw/os75/en2010_285_72000.raw', '/home/data/EN486/raw/os75/en2010_285_79200.raw', '/home/data/EN486/raw/os75/en2010_286_00000.raw', '/home/data/EN486/raw/os75/en2010_286_07200.raw', '/home/data/EN486/raw/os75/en2010_286_14400.raw', '/home/data/EN486/raw/os75/en2010_286_21600.raw', '/home/data/EN486/raw/os75/en2010_286_28800.raw', '/home/data/EN486/raw/os75/en2010_286_36000.raw', '/home/data/EN486/raw/os75/en2010_286_43200.raw', '/home/data/EN486/raw/os75/en2010_286_50400.raw', '/home/data/EN486/raw/os75/en2010_286_57600.raw', '/home/data/EN486/raw/os75/en2010_286_64800.raw', '/home/data/EN486/raw/os75/en2010_286_72000.raw', '/home/data/EN486/raw/os75/en2010_286_79200.raw', '/home/data/EN486/raw/os75/en2010_287_00000.raw', '/home/data/EN486/raw/os75/en2010_287_07200.raw', '/home/data/EN486/raw/os75/en2010_287_14400.raw', '/home/data/EN486/raw/os75/en2010_287_21600.raw', '/home/data/EN486/raw/os75/en2010_287_28800.raw', '/home/data/EN486/raw/os75/en2010_287_36000.raw', '/home/data/EN486/raw/os75/en2010_287_43200.raw', '/home/data/EN486/raw/os75/en2010_287_50400.raw', '/home/data/EN486/raw/os75/en2010_287_57600.raw', '/home/data/EN486/raw/os75/en2010_287_64800.raw', '/home/data/EN486/raw/os75/en2010_287_72000.raw', '/home/data/EN486/raw/os75/en2010_287_79200.raw', '/home/data/EN486/raw/os75/en2010_288_00000.raw', '/home/data/EN486/raw/os75/en2010_288_07200.raw', '/home/data/EN486/raw/os75/en2010_288_14400.raw', 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'/home/data/EN486/raw/os75/en2010_293_21600.raw', '/home/data/EN486/raw/os75/en2010_293_28800.raw', '/home/data/EN486/raw/os75/en2010_293_36000.raw', '/home/data/EN486/raw/os75/en2010_293_43200.raw', '/home/data/EN486/raw/os75/en2010_293_50400.raw', '/home/data/EN486/raw/os75/en2010_293_57600.raw', '/home/data/EN486/raw/os75/en2010_293_64800.raw', '/home/data/EN486/raw/os75/en2010_293_72000.raw', '/home/data/EN486/raw/os75/en2010_293_79200.raw', '/home/data/EN486/raw/os75/en2010_294_00000.raw', '/home/data/EN486/raw/os75/en2010_294_07200.raw', '/home/data/EN486/raw/os75/en2010_294_14400.raw', '/home/data/EN486/raw/os75/en2010_294_21600.raw', '/home/data/EN486/raw/os75/en2010_294_28800.raw', '/home/data/EN486/raw/os75/en2010_294_36000.raw', '/home/data/EN486/raw/os75/en2010_294_43200.raw', '/home/data/EN486/raw/os75/en2010_294_50400.raw', '/home/data/EN486/raw/os75/en2010_294_57600.raw', '/home/data/EN486/raw/os75/en2010_294_64800.raw', '/home/data/EN486/raw/os75/en2010_294_72000.raw', '/home/data/EN486/raw/os75/en2010_294_79200.raw', '/home/data/EN486/raw/os75/en2010_295_00000.raw', '/home/data/EN486/raw/os75/en2010_295_07200.raw', '/home/data/EN486/raw/os75/en2010_295_14400.raw', '/home/data/EN486/raw/os75/en2010_295_21600.raw', '/home/data/EN486/raw/os75/en2010_295_28800.raw', '/home/data/EN486/raw/os75/en2010_295_36000.raw', '/home/data/EN486/raw/os75/en2010_295_43200.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 30 fixfile a_en.gps hcorr_inst ashpaq2 head_func None help False hidedisplay True howto_lta False howto_ping False incremental False instclass os instname os75 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'nb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN486',... 'cfgpath' , '/home/data/EN486/proc/os75nb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 mplplots ['temp', 'nav', 'refl', 'hcorr', 'wtcal', 'btcal'] nosave_editcfg 0 npycalc ['refsm'] num_persistence 24 numbins 128 orig_fixfile a_en.gps overview False pgmin 50 ping_headcorr True pingtype nb post_headcorr False printformats png proc_yearbase 2010 procdir os75nb progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/EN486/raw/os75/en2010_285_49189.raw', '/home/data/EN486/raw/os75/en2010_285_50400.raw', '/home/data/EN486/raw/os75/en2010_285_57600.raw', '/home/data/EN486/raw/os75/en2010_285_64800.raw', '/home/data/EN486/raw/os75/en2010_285_72000.raw', '/home/data/EN486/raw/os75/en2010_285_79200.raw', '/home/data/EN486/raw/os75/en2010_286_00000.raw', '/home/data/EN486/raw/os75/en2010_286_07200.raw', '/home/data/EN486/raw/os75/en2010_286_14400.raw', '/home/data/EN486/raw/os75/en2010_286_21600.raw', '/home/data/EN486/raw/os75/en2010_286_28800.raw', '/home/data/EN486/raw/os75/en2010_286_36000.raw', '/home/data/EN486/raw/os75/en2010_286_43200.raw', '/home/data/EN486/raw/os75/en2010_286_50400.raw', '/home/data/EN486/raw/os75/en2010_286_57600.raw', '/home/data/EN486/raw/os75/en2010_286_64800.raw', '/home/data/EN486/raw/os75/en2010_286_72000.raw', '/home/data/EN486/raw/os75/en2010_286_79200.raw', '/home/data/EN486/raw/os75/en2010_287_00000.raw', '/home/data/EN486/raw/os75/en2010_287_07200.raw', '/home/data/EN486/raw/os75/en2010_287_14400.raw', '/home/data/EN486/raw/os75/en2010_287_21600.raw', '/home/data/EN486/raw/os75/en2010_287_28800.raw', '/home/data/EN486/raw/os75/en2010_287_36000.raw', '/home/data/EN486/raw/os75/en2010_287_43200.raw', '/home/data/EN486/raw/os75/en2010_287_50400.raw', '/home/data/EN486/raw/os75/en2010_287_57600.raw', 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'/home/data/EN486/raw/os75/en2010_292_64800.raw', '/home/data/EN486/raw/os75/en2010_292_72000.raw', '/home/data/EN486/raw/os75/en2010_292_79200.raw', '/home/data/EN486/raw/os75/en2010_293_00000.raw', '/home/data/EN486/raw/os75/en2010_293_07200.raw', '/home/data/EN486/raw/os75/en2010_293_14400.raw', '/home/data/EN486/raw/os75/en2010_293_21600.raw', '/home/data/EN486/raw/os75/en2010_293_28800.raw', '/home/data/EN486/raw/os75/en2010_293_36000.raw', '/home/data/EN486/raw/os75/en2010_293_43200.raw', '/home/data/EN486/raw/os75/en2010_293_50400.raw', '/home/data/EN486/raw/os75/en2010_293_57600.raw', '/home/data/EN486/raw/os75/en2010_293_64800.raw', '/home/data/EN486/raw/os75/en2010_293_72000.raw', '/home/data/EN486/raw/os75/en2010_293_79200.raw', '/home/data/EN486/raw/os75/en2010_294_00000.raw', '/home/data/EN486/raw/os75/en2010_294_07200.raw', '/home/data/EN486/raw/os75/en2010_294_14400.raw', '/home/data/EN486/raw/os75/en2010_294_21600.raw', '/home/data/EN486/raw/os75/en2010_294_28800.raw', '/home/data/EN486/raw/os75/en2010_294_36000.raw', '/home/data/EN486/raw/os75/en2010_294_43200.raw', '/home/data/EN486/raw/os75/en2010_294_50400.raw', '/home/data/EN486/raw/os75/en2010_294_57600.raw', '/home/data/EN486/raw/os75/en2010_294_64800.raw', '/home/data/EN486/raw/os75/en2010_294_72000.raw', '/home/data/EN486/raw/os75/en2010_294_79200.raw', '/home/data/EN486/raw/os75/en2010_295_00000.raw', '/home/data/EN486/raw/os75/en2010_295_07200.raw', '/home/data/EN486/raw/os75/en2010_295_14400.raw', '/home/data/EN486/raw/os75/en2010_295_21600.raw', '/home/data/EN486/raw/os75/en2010_295_28800.raw', '/home/data/EN486/raw/os75/en2010_295_36000.raw', '/home/data/EN486/raw/os75/en2010_295_43200.raw'] setup_info False skip_avg True smfile a_en_refsm.asc steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2010 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-10-23 12:10:54,008 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2010-10-23 12:10:54,008 DEBUG quick_run scanning files for time ranges... 2010-10-23 12:10:54,008 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb/scan 2010-10-23 12:10:54,008 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/scan 2010-10-23 12:10:54,009 DEBUG quick_setup running python command "scanraw" 2010-10-23 12:10:54,009 DEBUG call_matlab --> clear all 2010-10-23 12:10:54,013 DEBUG call_matlab <-- >> 2010-10-23 12:10:54,013 DEBUG call_matlab --> close all 2010-10-23 12:10:54,028 DEBUG call_matlab <-- >> 2010-10-23 12:10:54,028 DEBUG call_matlab --> cd /home/data/EN486/proc/os75nb/scan 2010-10-23 12:10:54,029 DEBUG call_matlab <-- >> 2010-10-23 12:10:54,030 DEBUG call_matlab --> scan_tmp 2010-10-23 12:10:54,566 DEBUG call_matlab <-- getting config files from "/home/data/EN486/proc/os75nb/config" running "EN486_cfg.m" running "EN486_proc.m" writing scan info to a_en.scn >> 2010-10-23 12:10:54,566 DEBUG quick_run writing time range from a_en.scn to a_en.tr 2010-10-23 12:10:54,566 DEBUG quick_run getting scan time range 2010-10-23 12:10:54,566 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,566 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/scan 2010-10-23 12:10:54,566 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,566 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,567 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,568 DEBUG quick_subs start_end_time 2010/10/13 13:39:54 to 2010/10/23 12:10:47 2010-10-23 12:10:54,568 DEBUG quick_subs dd0: 285.569375 dd1: 295.507488 2010-10-23 12:10:54,568 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,568 DEBUG quick_adcp looking for database with adcpdb/a_en*.blk 2010-10-23 12:10:54,569 DEBUG quick_adcp database found: listing blocks 2010-10-23 12:10:54,569 DEBUG quick_subs removing a_endir.blk 2010-10-23 12:10:54,569 DEBUG quick_subs about to run mkblkdir 2010-10-23 12:10:54,569 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-10-23 12:10:54,569 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-10-23 12:10:54,578 DEBUG quick_subs database passes. 2010-10-23 12:10:54,578 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,579 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,579 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,579 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,579 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,579 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,579 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,579 DEBUG quick_subs dd0: 285.572905 dd1: 295.485937 2010-10-23 12:10:54,580 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,580 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,580 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,580 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,580 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,580 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,580 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,581 DEBUG quick_subs dd0: 285.572905 dd1: 295.485937 2010-10-23 12:10:54,581 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2010-10-23 12:10:54,581 DEBUG quick_adcp origdb_time_range is 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,581 DEBUG quick_adcp (285.572905 to 295.485937) 2010-10-23 12:10:54,581 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2010-10-23 12:10:54,581 DEBUG quick_subs getting current (remaining after deletion) database times 2010-10-23 12:10:54,581 DEBUG quick_subs ['adcpdb/a_en017.blk', 'adcpdb/a_en018.blk', 'adcpdb/a_en011.blk', 'adcpdb/a_en002.blk', 'adcpdb/a_en019.blk', 'adcpdb/a_en005.blk', 'adcpdb/a_en016.blk', 'adcpdb/a_en014.blk', 'adcpdb/a_en007.blk', 'adcpdb/a_en015.blk', 'adcpdb/a_en012.blk', 'adcpdb/a_en013.blk', 'adcpdb/a_endir.blk', 'adcpdb/a_en009.blk', 'adcpdb/a_en003.blk', 'adcpdb/a_en008.blk', 'adcpdb/a_en001.blk', 'adcpdb/a_en010.blk', 'adcpdb/a_en020.blk', 'adcpdb/a_en004.blk', 'adcpdb/a_en006.blk'] 2010-10-23 12:10:54,582 DEBUG quick_subs length is 21 2010-10-23 12:10:54,582 DEBUG quick_subs removing a_endir.blk 2010-10-23 12:10:54,582 DEBUG quick_subs about to run mkblkdir 2010-10-23 12:10:54,582 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-10-23 12:10:54,582 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-10-23 12:10:54,590 DEBUG quick_subs database passes. 2010-10-23 12:10:54,591 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,591 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,591 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,591 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,591 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,592 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,592 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,592 DEBUG quick_subs dd0: 285.572905 dd1: 295.485937 2010-10-23 12:10:54,592 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,592 DEBUG quick_subs reading time range 2010-10-23 12:10:54,592 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,592 DEBUG quick_subs dd0: 285.572905 dd1: 295.485937 2010-10-23 12:10:54,593 INFO quick_subs Sat Oct 23 12:10:54 2010 2010-10-23 12:10:54,593 INFO quick_subs checking database time range by listblk 2010-10-23 12:10:54,593 DEBUG quick_subs removing a_endir.blk 2010-10-23 12:10:54,593 DEBUG quick_subs about to run mkblkdir 2010-10-23 12:10:54,593 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-10-23 12:10:54,593 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-10-23 12:10:54,602 DEBUG quick_subs database passes. 2010-10-23 12:10:54,602 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,602 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,602 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,602 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,602 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,603 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,603 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 11:39:45 2010-10-23 12:10:54,603 DEBUG quick_subs dd0: 285.572905 dd1: 295.485937 2010-10-23 12:10:54,604 INFO quick_subs found line /* 0 n= 146 a_en001.blk */ 2010/10/13 13:44:59 to 2010/10/14 01:51:39 2010-10-23 12:10:54,604 INFO quick_subs found line /* 1 n= 146 a_en002.blk */ 2010/10/14 01:56:39 to 2010/10/14 14:03:27 2010-10-23 12:10:54,604 INFO quick_subs found line /* 2 n= 146 a_en003.blk */ 2010/10/14 14:08:28 to 2010/10/15 02:19:53 2010-10-23 12:10:54,604 INFO quick_subs found line /* 3 n= 146 a_en004.blk */ 2010/10/15 02:24:54 to 2010/10/15 14:30:59 2010-10-23 12:10:54,604 INFO quick_subs found line /* 4 n= 146 a_en005.blk */ 2010/10/15 14:36:00 to 2010/10/16 02:42:24 2010-10-23 12:10:54,605 INFO quick_subs found line /* 5 n= 146 a_en006.blk */ 2010/10/16 02:47:25 to 2010/10/16 14:58:43 2010-10-23 12:10:54,605 INFO quick_subs found line /* 6 n= 146 a_en007.blk */ 2010/10/16 15:03:44 to 2010/10/17 03:09:54 2010-10-23 12:10:54,605 INFO quick_subs found line /* 7 n= 146 a_en008.blk */ 2010/10/17 03:14:55 to 2010/10/17 15:21:13 2010-10-23 12:10:54,605 INFO quick_subs found line /* 8 n= 146 a_en009.blk */ 2010/10/17 15:26:13 to 2010/10/18 03:32:39 2010-10-23 12:10:54,605 INFO quick_subs found line /* 9 n= 146 a_en010.blk */ 2010/10/18 03:37:39 to 2010/10/18 15:43:51 2010-10-23 12:10:54,605 INFO quick_subs found line /* 10 n= 146 a_en011.blk */ 2010/10/18 15:48:51 to 2010/10/19 03:55:09 2010-10-23 12:10:54,605 INFO quick_subs found line /* 11 n= 146 a_en012.blk */ 2010/10/19 04:00:13 to 2010/10/19 16:06:50 2010-10-23 12:10:54,605 INFO quick_subs found line /* 12 n= 146 a_en013.blk */ 2010/10/19 16:11:50 to 2010/10/20 04:18:37 2010-10-23 12:10:54,605 INFO quick_subs found line /* 13 n= 146 a_en014.blk */ 2010/10/20 04:23:38 to 2010/10/20 16:35:16 2010-10-23 12:10:54,605 INFO quick_subs found line /* 14 n= 146 a_en015.blk */ 2010/10/20 16:40:17 to 2010/10/21 04:47:15 2010-10-23 12:10:54,606 INFO quick_subs found line /* 15 n= 146 a_en016.blk */ 2010/10/21 04:52:15 to 2010/10/21 16:58:55 2010-10-23 12:10:54,606 INFO quick_subs found line /* 16 n= 146 a_en017.blk */ 2010/10/21 17:03:55 to 2010/10/22 05:10:18 2010-10-23 12:10:54,606 INFO quick_subs found line /* 17 n= 146 a_en018.blk */ 2010/10/22 05:15:19 to 2010/10/22 17:26:57 2010-10-23 12:10:54,606 INFO quick_subs found line /* 18 n= 146 a_en019.blk */ 2010/10/22 17:31:58 to 2010/10/23 05:43:48 2010-10-23 12:10:54,606 INFO quick_subs found line /* 19 n= 71 a_en020.blk */ 2010/10/23 05:48:52 to 2010/10/23 11:39:45 2010-10-23 12:10:54,606 INFO quick_subs scan data start at 285.5693750 2010-10-23 12:10:54,606 INFO quick_subs scan time range: 2010/10/13 13:39:54 to 2010/10/23 12:10:47 2010-10-23 12:10:54,606 INFO quick_subs codasdb ends at 295.4859375 (2010/10/23 11:39:45) 2010-10-23 12:10:54,606 DEBUG quick_subs ... changed dirs, in /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,607 DEBUG quick_subs deleting these files: ['a_en020.blk'] 2010-10-23 12:10:54,607 DEBUG quick_subs getting current (remaining after deletion) database times 2010-10-23 12:10:54,607 DEBUG quick_subs ['adcpdb/a_en017.blk', 'adcpdb/a_en018.blk', 'adcpdb/a_en011.blk', 'adcpdb/a_en002.blk', 'adcpdb/a_en019.blk', 'adcpdb/a_en005.blk', 'adcpdb/a_en016.blk', 'adcpdb/a_en014.blk', 'adcpdb/a_en007.blk', 'adcpdb/a_en015.blk', 'adcpdb/a_en012.blk', 'adcpdb/a_en013.blk', 'adcpdb/a_en009.blk', 'adcpdb/a_en003.blk', 'adcpdb/a_en008.blk', 'adcpdb/a_en001.blk', 'adcpdb/a_en010.blk', 'adcpdb/a_en004.blk', 'adcpdb/a_en006.blk'] 2010-10-23 12:10:54,607 DEBUG quick_subs length is 19 2010-10-23 12:10:54,608 DEBUG quick_subs about to run mkblkdir 2010-10-23 12:10:54,608 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-10-23 12:10:54,608 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-10-23 12:10:54,617 DEBUG quick_subs database passes. 2010-10-23 12:10:54,617 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,617 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,617 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,617 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,617 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,618 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,618 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 05:43:48 2010-10-23 12:10:54,618 DEBUG quick_subs dd0: 285.572905 dd1: 295.238750 2010-10-23 12:10:54,618 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,618 DEBUG quick_subs reading time range 2010-10-23 12:10:54,618 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 05:43:48 2010-10-23 12:10:54,618 DEBUG quick_subs dd0: 285.572905 dd1: 295.238750 2010-10-23 12:10:54,618 DEBUG quick_subs codas database currently goes from 2010/10/13 13:44:59 to 2010/10/23 05:43:48 2010-10-23 12:10:54,619 DEBUG quick_subs (285.572905 to 295.238750) 2010-10-23 12:10:54,619 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019 2010-10-23 12:10:54,620 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 2010-10-23 12:10:54,620 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019'] 2010-10-23 12:10:54,620 DEBUG quick_subs checked: unloaded blkstrs: ['020'] 2010-10-23 12:10:54,620 DEBUG quick_subs first unloaded file is load/ens_blk020.cmd 2010-10-23 12:10:54,621 DEBUG quick_subs data goes from 2010/10/23 05:48:52 to 2010/10/23 12:10:47 2010-10-23 12:10:54,621 DEBUG quick_subs (295.242269 to 295.507488) 2010-10-23 12:10:54,621 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/EN486/raw/os75/en2010_285_49189.raw /home/data/EN486/raw/os75/en2010_285_50400.raw /home/data/EN486/raw/os75/en2010_285_57600.raw /home/data/EN486/raw/os75/en2010_285_64800.raw /home/data/EN486/raw/os75/en2010_285_72000.raw /home/data/EN486/raw/os75/en2010_285_79200.raw /home/data/EN486/raw/os75/en2010_286_00000.raw /home/data/EN486/raw/os75/en2010_286_07200.raw /home/data/EN486/raw/os75/en2010_286_14400.raw /home/data/EN486/raw/os75/en2010_286_21600.raw /home/data/EN486/raw/os75/en2010_286_28800.raw /home/data/EN486/raw/os75/en2010_286_36000.raw /home/data/EN486/raw/os75/en2010_286_43200.raw /home/data/EN486/raw/os75/en2010_286_50400.raw /home/data/EN486/raw/os75/en2010_286_57600.raw /home/data/EN486/raw/os75/en2010_286_64800.raw /home/data/EN486/raw/os75/en2010_286_72000.raw /home/data/EN486/raw/os75/en2010_286_79200.raw /home/data/EN486/raw/os75/en2010_287_00000.raw /home/data/EN486/raw/os75/en2010_287_07200.raw /home/data/EN486/raw/os75/en2010_287_14400.raw /home/data/EN486/raw/os75/en2010_287_21600.raw /home/data/EN486/raw/os75/en2010_287_28800.raw /home/data/EN486/raw/os75/en2010_287_36000.raw /home/data/EN486/raw/os75/en2010_287_43200.raw /home/data/EN486/raw/os75/en2010_287_50400.raw /home/data/EN486/raw/os75/en2010_287_57600.raw /home/data/EN486/raw/os75/en2010_287_64800.raw /home/data/EN486/raw/os75/en2010_287_72000.raw /home/data/EN486/raw/os75/en2010_287_79200.raw /home/data/EN486/raw/os75/en2010_288_00000.raw /home/data/EN486/raw/os75/en2010_288_07200.raw /home/data/EN486/raw/os75/en2010_288_14400.raw /home/data/EN486/raw/os75/en2010_288_21600.raw /home/data/EN486/raw/os75/en2010_288_28800.raw /home/data/EN486/raw/os75/en2010_288_36000.raw /home/data/EN486/raw/os75/en2010_288_43200.raw /home/data/EN486/raw/os75/en2010_288_50400.raw /home/data/EN486/raw/os75/en2010_288_57600.raw /home/data/EN486/raw/os75/en2010_288_64800.raw /home/data/EN486/raw/os75/en2010_288_72000.raw /home/data/EN486/raw/os75/en2010_288_79200.raw /home/data/EN486/raw/os75/en2010_289_00000.raw /home/data/EN486/raw/os75/en2010_289_07200.raw /home/data/EN486/raw/os75/en2010_289_14400.raw /home/data/EN486/raw/os75/en2010_289_21600.raw /home/data/EN486/raw/os75/en2010_289_28800.raw /home/data/EN486/raw/os75/en2010_289_36000.raw /home/data/EN486/raw/os75/en2010_289_43200.raw /home/data/EN486/raw/os75/en2010_289_50400.raw /home/data/EN486/raw/os75/en2010_289_57600.raw /home/data/EN486/raw/os75/en2010_289_64800.raw /home/data/EN486/raw/os75/en2010_289_72000.raw /home/data/EN486/raw/os75/en2010_289_79200.raw /home/data/EN486/raw/os75/en2010_290_00000.raw /home/data/EN486/raw/os75/en2010_290_07200.raw /home/data/EN486/raw/os75/en2010_290_14400.raw /home/data/EN486/raw/os75/en2010_290_21600.raw /home/data/EN486/raw/os75/en2010_290_28800.raw /home/data/EN486/raw/os75/en2010_290_36000.raw /home/data/EN486/raw/os75/en2010_290_43200.raw /home/data/EN486/raw/os75/en2010_290_50400.raw /home/data/EN486/raw/os75/en2010_290_57600.raw /home/data/EN486/raw/os75/en2010_290_64800.raw /home/data/EN486/raw/os75/en2010_290_72000.raw /home/data/EN486/raw/os75/en2010_290_79200.raw /home/data/EN486/raw/os75/en2010_291_00000.raw /home/data/EN486/raw/os75/en2010_291_07200.raw /home/data/EN486/raw/os75/en2010_291_14400.raw /home/data/EN486/raw/os75/en2010_291_21600.raw /home/data/EN486/raw/os75/en2010_291_28800.raw /home/data/EN486/raw/os75/en2010_291_36000.raw /home/data/EN486/raw/os75/en2010_291_43200.raw /home/data/EN486/raw/os75/en2010_291_50400.raw /home/data/EN486/raw/os75/en2010_291_57600.raw /home/data/EN486/raw/os75/en2010_291_64800.raw /home/data/EN486/raw/os75/en2010_291_72000.raw /home/data/EN486/raw/os75/en2010_291_79200.raw /home/data/EN486/raw/os75/en2010_292_00000.raw /home/data/EN486/raw/os75/en2010_292_07200.raw /home/data/EN486/raw/os75/en2010_292_14400.raw /home/data/EN486/raw/os75/en2010_292_21600.raw /home/data/EN486/raw/os75/en2010_292_28800.raw /home/data/EN486/raw/os75/en2010_292_36000.raw /home/data/EN486/raw/os75/en2010_292_43200.raw /home/data/EN486/raw/os75/en2010_292_50400.raw /home/data/EN486/raw/os75/en2010_292_57600.raw /home/data/EN486/raw/os75/en2010_292_64800.raw /home/data/EN486/raw/os75/en2010_292_72000.raw /home/data/EN486/raw/os75/en2010_292_79200.raw /home/data/EN486/raw/os75/en2010_293_00000.raw /home/data/EN486/raw/os75/en2010_293_07200.raw /home/data/EN486/raw/os75/en2010_293_14400.raw /home/data/EN486/raw/os75/en2010_293_21600.raw /home/data/EN486/raw/os75/en2010_293_28800.raw /home/data/EN486/raw/os75/en2010_293_36000.raw /home/data/EN486/raw/os75/en2010_293_43200.raw /home/data/EN486/raw/os75/en2010_293_50400.raw /home/data/EN486/raw/os75/en2010_293_57600.raw /home/data/EN486/raw/os75/en2010_293_64800.raw /home/data/EN486/raw/os75/en2010_293_72000.raw /home/data/EN486/raw/os75/en2010_293_79200.raw /home/data/EN486/raw/os75/en2010_294_00000.raw /home/data/EN486/raw/os75/en2010_294_07200.raw /home/data/EN486/raw/os75/en2010_294_14400.raw /home/data/EN486/raw/os75/en2010_294_21600.raw /home/data/EN486/raw/os75/en2010_294_28800.raw /home/data/EN486/raw/os75/en2010_294_36000.raw /home/data/EN486/raw/os75/en2010_294_43200.raw /home/data/EN486/raw/os75/en2010_294_50400.raw /home/data/EN486/raw/os75/en2010_294_57600.raw /home/data/EN486/raw/os75/en2010_294_64800.raw /home/data/EN486/raw/os75/en2010_294_72000.raw /home/data/EN486/raw/os75/en2010_294_79200.raw /home/data/EN486/raw/os75/en2010_295_00000.raw /home/data/EN486/raw/os75/en2010_295_07200.raw /home/data/EN486/raw/os75/en2010_295_14400.raw /home/data/EN486/raw/os75/en2010_295_21600.raw /home/data/EN486/raw/os75/en2010_295_28800.raw /home/data/EN486/raw/os75/en2010_295_36000.raw /home/data/EN486/raw/os75/en2010_295_43200.raw 2010-10-23 12:10:54,621 INFO quick_run Sat Oct 23 12:10:54 2010 2010-10-23 12:10:54,621 INFO quick_run about to load uhdas files 2010-10-23 12:10:54,621 INFO quick_run /home/data/EN486/raw/os75/en2010_285_49189.raw /home/data/EN486/raw/os75/en2010_285_50400.raw /home/data/EN486/raw/os75/en2010_285_57600.raw /home/data/EN486/raw/os75/en2010_285_64800.raw /home/data/EN486/raw/os75/en2010_285_72000.raw /home/data/EN486/raw/os75/en2010_285_79200.raw /home/data/EN486/raw/os75/en2010_286_00000.raw /home/data/EN486/raw/os75/en2010_286_07200.raw /home/data/EN486/raw/os75/en2010_286_14400.raw /home/data/EN486/raw/os75/en2010_286_21600.raw /home/data/EN486/raw/os75/en2010_286_28800.raw /home/data/EN486/raw/os75/en2010_286_36000.raw /home/data/EN486/raw/os75/en2010_286_43200.raw /home/data/EN486/raw/os75/en2010_286_50400.raw /home/data/EN486/raw/os75/en2010_286_57600.raw /home/data/EN486/raw/os75/en2010_286_64800.raw /home/data/EN486/raw/os75/en2010_286_72000.raw /home/data/EN486/raw/os75/en2010_286_79200.raw /home/data/EN486/raw/os75/en2010_287_00000.raw /home/data/EN486/raw/os75/en2010_287_07200.raw /home/data/EN486/raw/os75/en2010_287_14400.raw /home/data/EN486/raw/os75/en2010_287_21600.raw /home/data/EN486/raw/os75/en2010_287_28800.raw /home/data/EN486/raw/os75/en2010_287_36000.raw /home/data/EN486/raw/os75/en2010_287_43200.raw /home/data/EN486/raw/os75/en2010_287_50400.raw /home/data/EN486/raw/os75/en2010_287_57600.raw /home/data/EN486/raw/os75/en2010_287_64800.raw /home/data/EN486/raw/os75/en2010_287_72000.raw /home/data/EN486/raw/os75/en2010_287_79200.raw /home/data/EN486/raw/os75/en2010_288_00000.raw /home/data/EN486/raw/os75/en2010_288_07200.raw /home/data/EN486/raw/os75/en2010_288_14400.raw /home/data/EN486/raw/os75/en2010_288_21600.raw /home/data/EN486/raw/os75/en2010_288_28800.raw /home/data/EN486/raw/os75/en2010_288_36000.raw /home/data/EN486/raw/os75/en2010_288_43200.raw /home/data/EN486/raw/os75/en2010_288_50400.raw /home/data/EN486/raw/os75/en2010_288_57600.raw /home/data/EN486/raw/os75/en2010_288_64800.raw /home/data/EN486/raw/os75/en2010_288_72000.raw /home/data/EN486/raw/os75/en2010_288_79200.raw /home/data/EN486/raw/os75/en2010_289_00000.raw /home/data/EN486/raw/os75/en2010_289_07200.raw /home/data/EN486/raw/os75/en2010_289_14400.raw /home/data/EN486/raw/os75/en2010_289_21600.raw /home/data/EN486/raw/os75/en2010_289_28800.raw /home/data/EN486/raw/os75/en2010_289_36000.raw /home/data/EN486/raw/os75/en2010_289_43200.raw /home/data/EN486/raw/os75/en2010_289_50400.raw /home/data/EN486/raw/os75/en2010_289_57600.raw /home/data/EN486/raw/os75/en2010_289_64800.raw /home/data/EN486/raw/os75/en2010_289_72000.raw /home/data/EN486/raw/os75/en2010_289_79200.raw /home/data/EN486/raw/os75/en2010_290_00000.raw /home/data/EN486/raw/os75/en2010_290_07200.raw /home/data/EN486/raw/os75/en2010_290_14400.raw /home/data/EN486/raw/os75/en2010_290_21600.raw /home/data/EN486/raw/os75/en2010_290_28800.raw /home/data/EN486/raw/os75/en2010_290_36000.raw /home/data/EN486/raw/os75/en2010_290_43200.raw /home/data/EN486/raw/os75/en2010_290_50400.raw /home/data/EN486/raw/os75/en2010_290_57600.raw /home/data/EN486/raw/os75/en2010_290_64800.raw /home/data/EN486/raw/os75/en2010_290_72000.raw /home/data/EN486/raw/os75/en2010_290_79200.raw /home/data/EN486/raw/os75/en2010_291_00000.raw /home/data/EN486/raw/os75/en2010_291_07200.raw /home/data/EN486/raw/os75/en2010_291_14400.raw /home/data/EN486/raw/os75/en2010_291_21600.raw /home/data/EN486/raw/os75/en2010_291_28800.raw /home/data/EN486/raw/os75/en2010_291_36000.raw /home/data/EN486/raw/os75/en2010_291_43200.raw /home/data/EN486/raw/os75/en2010_291_50400.raw /home/data/EN486/raw/os75/en2010_291_57600.raw /home/data/EN486/raw/os75/en2010_291_64800.raw /home/data/EN486/raw/os75/en2010_291_72000.raw /home/data/EN486/raw/os75/en2010_291_79200.raw /home/data/EN486/raw/os75/en2010_292_00000.raw /home/data/EN486/raw/os75/en2010_292_07200.raw /home/data/EN486/raw/os75/en2010_292_14400.raw /home/data/EN486/raw/os75/en2010_292_21600.raw /home/data/EN486/raw/os75/en2010_292_28800.raw /home/data/EN486/raw/os75/en2010_292_36000.raw /home/data/EN486/raw/os75/en2010_292_43200.raw /home/data/EN486/raw/os75/en2010_292_50400.raw /home/data/EN486/raw/os75/en2010_292_57600.raw /home/data/EN486/raw/os75/en2010_292_64800.raw /home/data/EN486/raw/os75/en2010_292_72000.raw /home/data/EN486/raw/os75/en2010_292_79200.raw /home/data/EN486/raw/os75/en2010_293_00000.raw /home/data/EN486/raw/os75/en2010_293_07200.raw /home/data/EN486/raw/os75/en2010_293_14400.raw /home/data/EN486/raw/os75/en2010_293_21600.raw /home/data/EN486/raw/os75/en2010_293_28800.raw /home/data/EN486/raw/os75/en2010_293_36000.raw /home/data/EN486/raw/os75/en2010_293_43200.raw /home/data/EN486/raw/os75/en2010_293_50400.raw /home/data/EN486/raw/os75/en2010_293_57600.raw /home/data/EN486/raw/os75/en2010_293_64800.raw /home/data/EN486/raw/os75/en2010_293_72000.raw /home/data/EN486/raw/os75/en2010_293_79200.raw /home/data/EN486/raw/os75/en2010_294_00000.raw /home/data/EN486/raw/os75/en2010_294_07200.raw /home/data/EN486/raw/os75/en2010_294_14400.raw /home/data/EN486/raw/os75/en2010_294_21600.raw /home/data/EN486/raw/os75/en2010_294_28800.raw /home/data/EN486/raw/os75/en2010_294_36000.raw /home/data/EN486/raw/os75/en2010_294_43200.raw /home/data/EN486/raw/os75/en2010_294_50400.raw /home/data/EN486/raw/os75/en2010_294_57600.raw /home/data/EN486/raw/os75/en2010_294_64800.raw /home/data/EN486/raw/os75/en2010_294_72000.raw /home/data/EN486/raw/os75/en2010_294_79200.raw /home/data/EN486/raw/os75/en2010_295_00000.raw /home/data/EN486/raw/os75/en2010_295_07200.raw /home/data/EN486/raw/os75/en2010_295_14400.raw /home/data/EN486/raw/os75/en2010_295_21600.raw /home/data/EN486/raw/os75/en2010_295_28800.raw /home/data/EN486/raw/os75/en2010_295_36000.raw /home/data/EN486/raw/os75/en2010_295_43200.raw 2010-10-23 12:10:54,621 DEBUG quick_setup load/ldcodas.tmp exists 2010-10-23 12:10:54,621 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,621 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/load 2010-10-23 12:10:54,621 DEBUG quick_setup running python command "ldcodas" 2010-10-23 12:10:54,622 DEBUG quick_subs in /home/data/EN486/proc/os75nb/load 2010-10-23 12:10:54,622 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019'] 2010-10-23 12:10:54,622 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020'] 2010-10-23 12:10:54,623 DEBUG quick_subs starttime is 2010/10/23 05:48:52 2010-10-23 12:10:54,623 DEBUG quick_subs RESETTING thisload_time_range 2010-10-23 12:10:54,623 DEBUG quick_subs time range of data to be loaded: 2010/10/23 05:48:52 to 2010/10/23 12:10:47 2010-10-23 12:10:54,623 DEBUG quick_subs data startdd 295.242269 data enddd 295.507488 2010-10-23 12:10:54,623 DEBUG quick_subs about to load from these cmd files ['ens_blk020.cmd'] 2010-10-23 12:10:54,623 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_en DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2010 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk020.cmd 2010-10-23 12:10:54,623 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2010-10-23 12:10:54,643 DEBUG quick_subs removing a_endir.blk 2010-10-23 12:10:54,644 DEBUG quick_subs about to run mkblkdir 2010-10-23 12:10:54,644 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-10-23 12:10:54,644 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-10-23 12:10:54,653 DEBUG quick_subs database passes. 2010-10-23 12:10:54,653 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,654 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,654 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,654 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,654 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,654 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,654 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 12:09:49 2010-10-23 12:10:54,654 DEBUG quick_subs dd0: 285.572905 dd1: 295.506817 2010-10-23 12:10:54,655 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-10-23 12:10:54,655 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,655 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,655 DEBUG quick_setup running python command "get_time_range" 2010-10-23 12:10:54,655 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-10-23 12:10:54,655 DEBUG quick_subs extracting time range 2010-10-23 12:10:54,655 DEBUG quick_subs start_end_time 2010/10/13 13:44:59 to 2010/10/23 12:09:49 2010-10-23 12:10:54,656 DEBUG quick_subs dd0: 285.572905 dd1: 295.506817 2010-10-23 12:10:54,656 DEBUG quick_adcp loaded_time_range is 2010/10/13 13:44:59 to 2010/10/23 12:09:49 2010-10-23 12:10:54,656 DEBUG quick_adcp (285.572905 to 295.506817) 2010-10-23 12:10:54,656 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,656 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/adcpdb 2010-10-23 12:10:54,656 DEBUG quick_setup running python command "lst_conf" 2010-10-23 12:10:54,656 DEBUG quick_subs dbname: a_en output: a_en.cnh time_ranges: all 2010-10-23 12:10:54,656 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2010-10-23 12:10:54,674 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2010-10-23 12:10:54,674 DEBUG quick_run executing commands from /home/data/EN486/proc/os75nb/edit 2010-10-23 12:10:54,675 DEBUG quick_run setup.m exists. not replacing 2010-10-23 12:10:54,675 DEBUG quick_run asetup.m exists. not replacing 2010-10-23 12:10:54,675 DEBUG quick_run aflagit_setup.m exists. not replacing 2010-10-23 12:10:54,675 DEBUG quick_run ------------ step 4: run setflags ------------- 2010-10-23 12:10:54,675 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,675 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/edit 2010-10-23 12:10:54,675 DEBUG quick_setup running python command "setflags" 2010-10-23 12:10:54,675 DEBUG quick_subs dbname: ../adcpdb/a_en pg_min: 50 set_range_bit time_ranges: all 2010-10-23 12:10:54,675 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-10-23 12:10:54,716 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2010-10-23 12:10:54,716 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,716 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:10:54,716 DEBUG quick_setup running python command "catnav" 2010-10-23 12:10:54,718 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2010-10-23 12:10:54,719 DEBUG quick_run hcorr_inst is ashpaq2 2010-10-23 12:10:54,719 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2010-10-23 12:10:54,719 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,719 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/rotate 2010-10-23 12:10:54,719 DEBUG quick_setup running python command "lst_hdg" 2010-10-23 12:10:54,719 DEBUG quick_subs dbname: ../../adcpdb/a_en output: scn.hdg step_size= 1 year_base= 2010 time_ranges: all 2010-10-23 12:10:54,719 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2010-10-23 12:10:54,745 DEBUG quick_run no available heading correction function specified 2010-10-23 12:10:54,745 DEBUG quick_run ------------ step 7: rotate ------------- 2010-10-23 12:10:54,745 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,745 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/rotate 2010-10-23 12:10:54,745 DEBUG quick_setup running python command "rotated" 2010-10-23 12:10:54,762 DEBUG quick_subs last rotated time from log file: 2010/10/23 11:40:47 2010-10-23 12:10:54,762 DEBUG quick_subs time range of currently loaded data: 2010/10/13 13:44:59 to 2010/10/23 12:09:49 2010-10-23 12:10:54,762 DEBUG quick_subs (285.572905 to 295.506817) 2010-10-23 12:10:54,763 DEBUG quick_setup cal/rotate/rotate.tmp exists 2010-10-23 12:10:54,763 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,763 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/rotate 2010-10-23 12:10:54,763 DEBUG quick_setup running python command "rotate" 2010-10-23 12:10:54,763 DEBUG quick_subs DB_NAME: ../../adcpdb/a_en LOG_FILE: rotate.log TIME_RANGE: 2010/10/23 05:48:52 to 2010/10/23 12:10:47 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2010 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2010-10-23 12:10:54,763 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2010-10-23 12:10:54,769 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-10-23 12:10:54,769 DEBUG quick_setup nav/as_nav.tmp exists 2010-10-23 12:10:54,769 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,769 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:10:54,770 DEBUG quick_setup running python command "as_nav" 2010-10-23 12:10:54,770 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/10/13 13:44:59 to 2010/10/23 12:09:49 /* the whole time range */ 2010-10-23 12:10:54,770 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-10-23 12:10:54,826 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-10-23 12:10:54,827 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,827 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:10:54,827 DEBUG quick_setup running python command "refabs" 2010-10-23 12:10:54,827 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-10-23 12:10:54,827 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-10-23 12:10:54,867 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-10-23 12:10:54,867 DEBUG quick_setup nav/smoothr.tmp exists 2010-10-23 12:10:54,868 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:54,868 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:10:54,868 DEBUG quick_setup running python command "smoothr" 2010-10-23 12:10:54,868 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-10-23 12:10:54,868 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-10-23 12:10:55,047 DEBUG quick_adcp about to run numpy refsm 2010-10-23 12:10:55,047 DEBUG quick_npy Starting: refsm 2010-10-23 12:10:55,169 INFO nav dtmin = -0.50 dtmax = 0.50 2010-10-23 12:10:55,371 DEBUG quick_npy Ending: refsm 2010-10-23 12:10:55,372 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-10-23 12:10:55,372 DEBUG quick_setup nav/putnav.tmp exists 2010-10-23 12:10:55,372 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:55,372 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:10:55,372 DEBUG quick_setup running python command "putnav" 2010-10-23 12:10:55,372 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: a_en_refsm.asc year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-10-23 12:10:55,372 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-10-23 12:10:56,454 DEBUG quick_adcp plotting navigation 2010-10-23 12:10:56,454 DEBUG quick_mpl Starting plot: nav 2010-10-23 12:10:56,816 DEBUG quick_mpl Ending plot: nav 2010-10-23 12:10:56,816 DEBUG quick_mpl Starting plot: refl 2010-10-23 12:10:56,912 DEBUG quick_mplplots found 9.930400 days of data 2010-10-23 12:10:56,913 DEBUG quick_mplplots start day is 285.000000 2010-10-23 12:10:56,913 DEBUG quick_mplplots figures with 2.000000 days per page 2010-10-23 12:10:56,913 DEBUG quick_mplplots printing 6 pages 2010-10-23 12:10:56,913 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2010-10-23 12:10:56,913 INFO quick_mplplots startdd is 285.0 2010-10-23 12:10:56,913 INFO quick_mplplots dt is 2.0 2010-10-23 12:10:59,029 DEBUG quick_mpl Ending plot: refl 2010-10-23 12:10:59,029 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2010-10-23 12:10:59,029 DEBUG quick_run find profile flags ------------ *** ------------- 2010-10-23 12:10:59,029 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:10:59,029 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/edit 2010-10-23 12:10:59,029 DEBUG quick_setup running python command "aedit" 2010-10-23 12:11:00,302 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2010-10-23 12:11:00,437 DEBUG quick_run starting in: /home/data/EN486/proc/os75nb 2010-10-23 12:11:00,437 DEBUG quick_run executing commands from: edit 2010-10-23 12:11:00,439 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_en abadprf_tmp.asc 2010-10-23 12:11:00,550 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_en abadbin_tmp.asc 2010-10-23 12:11:01,012 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_en 30 2010-10-23 12:11:01,018 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-10-23 12:11:01,380 DEBUG quick_run changing directories back to /home/data/EN486/proc/os75nb 2010-10-23 12:11:01,380 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2010-10-23 12:11:01,380 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-10-23 12:11:01,380 DEBUG quick_setup nav/as_nav.tmp exists 2010-10-23 12:11:01,380 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:01,381 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:11:01,381 DEBUG quick_setup running python command "as_nav" 2010-10-23 12:11:01,381 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/10/13 13:44:59 to 2010/10/23 12:09:49 /* the whole time range */ 2010-10-23 12:11:01,381 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-10-23 12:11:01,437 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-10-23 12:11:01,437 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:01,437 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:11:01,437 DEBUG quick_setup running python command "refabs" 2010-10-23 12:11:01,438 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-10-23 12:11:01,438 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-10-23 12:11:01,472 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-10-23 12:11:01,472 DEBUG quick_setup nav/smoothr.tmp exists 2010-10-23 12:11:01,472 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:01,473 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:11:01,473 DEBUG quick_setup running python command "smoothr" 2010-10-23 12:11:01,473 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-10-23 12:11:01,473 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-10-23 12:11:01,646 DEBUG quick_adcp running refsm 2010-10-23 12:11:01,646 DEBUG quick_npy Starting: refsm 2010-10-23 12:11:01,758 INFO nav dtmin = -0.50 dtmax = 0.50 2010-10-23 12:11:01,914 DEBUG quick_npy Ending: refsm 2010-10-23 12:11:01,914 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-10-23 12:11:01,914 DEBUG quick_setup nav/putnav.tmp exists 2010-10-23 12:11:01,914 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:01,914 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:11:01,914 DEBUG quick_setup running python command "putnav" 2010-10-23 12:11:01,914 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: a_en_refsm.asc year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-10-23 12:11:01,915 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-10-23 12:11:01,975 DEBUG quick_mpl Starting plot: nav 2010-10-23 12:11:02,341 DEBUG quick_mpl Ending plot: nav 2010-10-23 12:11:02,341 DEBUG quick_mpl Starting plot: refl 2010-10-23 12:11:02,437 DEBUG quick_mplplots found 9.930400 days of data 2010-10-23 12:11:02,437 DEBUG quick_mplplots start day is 285.000000 2010-10-23 12:11:02,437 DEBUG quick_mplplots figures with 2.000000 days per page 2010-10-23 12:11:02,437 DEBUG quick_mplplots printing 6 pages 2010-10-23 12:11:02,437 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2010-10-23 12:11:02,437 INFO quick_mplplots startdd is 285.0 2010-10-23 12:11:02,437 INFO quick_mplplots dt is 2.0 2010-10-23 12:11:04,598 DEBUG quick_mpl Ending plot: refl 2010-10-23 12:11:04,598 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2010-10-23 12:11:04,598 DEBUG quick_setup edit/lst_temp.tmp exists 2010-10-23 12:11:04,598 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:04,598 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/edit 2010-10-23 12:11:04,598 DEBUG quick_setup running python command "lst_temp" 2010-10-23 12:11:04,599 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en.tem step_size= 1 year_base= 2010 time_ranges: all 2010-10-23 12:11:04,599 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2010-10-23 12:11:04,628 DEBUG quick_mpl Starting plot: temp 2010-10-23 12:11:04,662 DEBUG quick_mplplots plotting 2851 points 2010-10-23 12:11:04,942 DEBUG quick_mpl Ending plot: temp 2010-10-23 12:11:04,942 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2010-10-23 12:11:04,942 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2010-10-23 12:11:04,942 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:04,943 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/botmtrk 2010-10-23 12:11:04,943 DEBUG quick_setup running python command "lst_btrk" 2010-10-23 12:11:04,943 DEBUG quick_subs dbname: ../../adcpdb/a_en output: a_en.btm step_size= 1 year_base= 2010 time_ranges: 2010/10/13 13:44:59 to 2010/10/23 12:09:49 /* whole time range */ 2010-10-23 12:11:04,943 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2010-10-23 12:11:04,959 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2010-10-23 12:11:04,959 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:04,959 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/botmtrk 2010-10-23 12:11:04,959 DEBUG quick_setup running python command "refabsbt" 2010-10-23 12:11:04,959 DEBUG quick_subs fix_file_type: simple reference_file: a_en.btm fix_file: ../../nav/a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 60 2010-10-23 12:11:04,960 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2010-10-23 12:11:04,966 DEBUG quick_mpl Starting plot: btcal 2010-10-23 12:11:04,967 DEBUG quick_mplplots No data in a_en.btm 2010-10-23 12:11:04,967 DEBUG quick_mplplots Returning from Btplot with no output 2010-10-23 12:11:04,968 DEBUG quick_mpl Ending plot: btcal 2010-10-23 12:11:04,968 DEBUG quick_setup nav/as_nav.tmp exists 2010-10-23 12:11:04,968 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:04,968 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/nav 2010-10-23 12:11:04,968 DEBUG quick_setup running python command "as_nav" 2010-10-23 12:11:04,968 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/10/13 13:44:59 to 2010/10/23 12:09:49 /* the whole time range */ 2010-10-23 12:11:04,968 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-10-23 12:11:05,028 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2010-10-23 12:11:05,028 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:05,028 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/cal/watertrk 2010-10-23 12:11:05,029 DEBUG quick_setup running python command "timslip" 2010-10-23 12:11:05,029 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_en.gps reference_file: ../../nav/a_en.nav output_file: a_en_7.cal year_base= 2010 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2010-10-23 12:11:05,029 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2010-10-23 12:11:05,055 DEBUG quick_mpl Starting plot: wtcal 2010-10-23 12:11:05,059 DEBUG quick_mplplots Found 143 calibration points 2010-10-23 12:11:05,901 DEBUG quick_mpl Ending plot: wtcal 2010-10-23 12:11:05,968 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2010-10-23 12:11:05,968 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:05,968 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/vector 2010-10-23 12:11:05,968 DEBUG quick_setup running python command "timegrid" 2010-10-23 12:11:05,968 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-10-23 12:11:05,974 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:05,975 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/vector 2010-10-23 12:11:05,975 DEBUG quick_setup running python command "as_vect" 2010-10-23 12:11:05,975 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2010-10-23 12:11:06,031 DEBUG quick_asect done making vector matfiles 2010-10-23 12:11:06,031 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:06,031 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/contour 2010-10-23 12:11:06,031 DEBUG quick_setup running python command "timegrid" 2010-10-23 12:11:06,032 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-10-23 12:11:06,040 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:06,040 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/contour 2010-10-23 12:11:06,040 DEBUG quick_setup running python command "as_cont" 2010-10-23 12:11:06,040 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2010-10-23 12:11:06,117 DEBUG quick_setup starting in /home/data/EN486/proc/os75nb 2010-10-23 12:11:06,118 DEBUG quick_setup executing commands from /home/data/EN486/proc/os75nb/contour 2010-10-23 12:11:06,118 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_en 2010-10-23 12:11:06,351 DEBUG quick_asect done running getmat with "allbins" 2010-10-23 12:11:06,380 INFO root copying NOFIG to /home/adcp/www/figures/os75nb_hcorr_plot.png 2010-10-23 12:11:06,380 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/os75nb_hcorr_plot_thumb.png 2010-10-23 12:11:06,380 DEBUG root matfile is contour/contour_uv.mat 2010-10-23 12:11:06,385 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/os75nb_cont_uv.mat 2010-10-23 12:11:06,385 DEBUG root matfile is vector/vector_uv.mat 2010-10-23 12:11:06,386 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/os75nb_vect_uv.mat 2010-10-23 12:11:06,386 DEBUG root matfile is contour/contour_xy.mat 2010-10-23 12:11:06,386 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/os75nb_cont_xy.mat 2010-10-23 12:11:06,386 DEBUG root matfile is vector/vector_xy.mat 2010-10-23 12:11:06,386 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/os75nb_vect_xy.mat 2010-10-23 12:11:06,386 DEBUG root about to copy file edit/a_en.tem to /home/adcp/www/data/os75nb_temp.asc 2010-10-23 12:11:06,387 INFO root copying edit/a_en.tem to /home/adcp/www/data/os75nb_temp.asc 2010-10-23 12:11:06,387 INFO root Ending quick_adcp.py 2010-10-23 12:11:06,438 DEBUG quick_setup killed matlab engine