2010-07-23 17:27:28,222 DEBUG root about to write control file parameters to --yearbase 2010 --pingtype bb --cfgbase EN480 --cruisename EN480 --instclass wh --instname wh300 --dbname a_en --datatype uhdas --datadir /home/data/EN480/raw/wh300 --cfgpath /home/data/EN480/proc/wh300/config --ens_len 120 --ping_headcorr --hcorr_inst ashpaq2 --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto 2010-07-23 17:27:28,223 DEBUG quick_adcp progdir = /home/currents/programs 2010-07-23 17:27:28,223 DEBUG quick_adcp binos = lnx 2010-07-23 17:27:28,223 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2010-07-23 17:27:28,223 DEBUG quick_setup yearbase is 2010, proc_yearbase is 2010 2010-07-23 17:27:28,223 DEBUG quick_setup processing data logged with uhdas: 2010-07-23 17:27:28,224 DEBUG quick_setup datatype is uhdas 2010-07-23 17:27:28,224 DEBUG quick_setup pingtype is bb 2010-07-23 17:27:28,224 DEBUG quick_setup instclass is wh 2010-07-23 17:27:28,224 DEBUG quick_setup no post-processing heading correction will be used 2010-07-23 17:27:28,224 DEBUG quick_setup transducer depth set in *_cfg.m file 2010-07-23 17:27:28,233 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = wh; instname = 'wh300'; pingtype = 'bb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN480',... 'cfgpath' , '/home/data/EN480/proc/wh300/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2010-07-23 17:27:28,233 DEBUG quick_setup ------- starting Matlab engine ------- 2010-07-23 17:27:28,234 DEBUG quick_setup ['/home/currents/programs/matlab'] 2010-07-23 17:27:28,235 DEBUG call_matlab starting to wait for initial prompt 2010-07-23 17:27:28,732 DEBUG call_matlab received initial prompt 2010-07-23 17:27:28,854 DEBUG quick_adcp cwd is /home/data/EN480/proc/wh300 about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-07-23 17:27:28,854 DEBUG quick_adcp original fix file is a_en.gps 2010-07-23 17:27:28,855 DEBUG quick_adcp smoothed nav file is refsm.sm 2010-07-23 17:27:28,855 DEBUG quick_asect extracting matlab files for wh300, bb pings 2010-07-23 17:27:28,942 DEBUG quick_subs found 118 files using wildcard expansion from "/home/data/EN480/raw/wh300/*.raw" 2010-07-23 17:27:28,942 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/EN480/raw/wh300/en2010_193_70010.raw /home/data/EN480/raw/wh300/en2010_193_72000.raw /home/data/EN480/raw/wh300/en2010_193_79200.raw /home/data/EN480/raw/wh300/en2010_194_00000.raw /home/data/EN480/raw/wh300/en2010_194_07200.raw /home/data/EN480/raw/wh300/en2010_194_14400.raw /home/data/EN480/raw/wh300/en2010_194_21600.raw /home/data/EN480/raw/wh300/en2010_194_28800.raw /home/data/EN480/raw/wh300/en2010_194_36000.raw /home/data/EN480/raw/wh300/en2010_194_43200.raw /home/data/EN480/raw/wh300/en2010_194_50400.raw /home/data/EN480/raw/wh300/en2010_194_57600.raw /home/data/EN480/raw/wh300/en2010_194_64800.raw /home/data/EN480/raw/wh300/en2010_194_72000.raw /home/data/EN480/raw/wh300/en2010_194_79200.raw /home/data/EN480/raw/wh300/en2010_195_00000.raw /home/data/EN480/raw/wh300/en2010_195_07200.raw /home/data/EN480/raw/wh300/en2010_195_14400.raw /home/data/EN480/raw/wh300/en2010_195_21600.raw /home/data/EN480/raw/wh300/en2010_195_28800.raw /home/data/EN480/raw/wh300/en2010_195_36000.raw /home/data/EN480/raw/wh300/en2010_195_43200.raw /home/data/EN480/raw/wh300/en2010_195_50400.raw /home/data/EN480/raw/wh300/en2010_195_57600.raw /home/data/EN480/raw/wh300/en2010_195_64800.raw /home/data/EN480/raw/wh300/en2010_195_72000.raw /home/data/EN480/raw/wh300/en2010_195_79200.raw /home/data/EN480/raw/wh300/en2010_196_00000.raw /home/data/EN480/raw/wh300/en2010_196_07200.raw /home/data/EN480/raw/wh300/en2010_196_14400.raw /home/data/EN480/raw/wh300/en2010_196_21600.raw /home/data/EN480/raw/wh300/en2010_196_28800.raw /home/data/EN480/raw/wh300/en2010_196_36000.raw /home/data/EN480/raw/wh300/en2010_196_43200.raw /home/data/EN480/raw/wh300/en2010_196_50400.raw /home/data/EN480/raw/wh300/en2010_196_57600.raw /home/data/EN480/raw/wh300/en2010_196_64800.raw /home/data/EN480/raw/wh300/en2010_196_72000.raw /home/data/EN480/raw/wh300/en2010_196_79200.raw /home/data/EN480/raw/wh300/en2010_197_00000.raw /home/data/EN480/raw/wh300/en2010_197_07200.raw /home/data/EN480/raw/wh300/en2010_197_14400.raw /home/data/EN480/raw/wh300/en2010_197_21600.raw /home/data/EN480/raw/wh300/en2010_197_28800.raw /home/data/EN480/raw/wh300/en2010_197_36000.raw /home/data/EN480/raw/wh300/en2010_197_43200.raw /home/data/EN480/raw/wh300/en2010_197_50400.raw /home/data/EN480/raw/wh300/en2010_197_57600.raw /home/data/EN480/raw/wh300/en2010_197_64800.raw /home/data/EN480/raw/wh300/en2010_197_72000.raw /home/data/EN480/raw/wh300/en2010_197_79200.raw /home/data/EN480/raw/wh300/en2010_198_00000.raw /home/data/EN480/raw/wh300/en2010_198_07200.raw /home/data/EN480/raw/wh300/en2010_198_14400.raw /home/data/EN480/raw/wh300/en2010_198_21600.raw /home/data/EN480/raw/wh300/en2010_198_28800.raw /home/data/EN480/raw/wh300/en2010_198_36000.raw /home/data/EN480/raw/wh300/en2010_198_43200.raw /home/data/EN480/raw/wh300/en2010_198_50400.raw /home/data/EN480/raw/wh300/en2010_198_57600.raw /home/data/EN480/raw/wh300/en2010_198_64800.raw /home/data/EN480/raw/wh300/en2010_198_72000.raw /home/data/EN480/raw/wh300/en2010_198_79200.raw /home/data/EN480/raw/wh300/en2010_199_00000.raw /home/data/EN480/raw/wh300/en2010_199_07200.raw /home/data/EN480/raw/wh300/en2010_199_14400.raw /home/data/EN480/raw/wh300/en2010_199_21600.raw /home/data/EN480/raw/wh300/en2010_199_28800.raw /home/data/EN480/raw/wh300/en2010_199_36000.raw /home/data/EN480/raw/wh300/en2010_199_43200.raw /home/data/EN480/raw/wh300/en2010_199_50400.raw /home/data/EN480/raw/wh300/en2010_199_57600.raw /home/data/EN480/raw/wh300/en2010_199_64800.raw /home/data/EN480/raw/wh300/en2010_199_72000.raw /home/data/EN480/raw/wh300/en2010_199_79200.raw /home/data/EN480/raw/wh300/en2010_200_00000.raw /home/data/EN480/raw/wh300/en2010_200_07200.raw /home/data/EN480/raw/wh300/en2010_200_14400.raw /home/data/EN480/raw/wh300/en2010_200_21600.raw /home/data/EN480/raw/wh300/en2010_200_28800.raw /home/data/EN480/raw/wh300/en2010_200_36000.raw /home/data/EN480/raw/wh300/en2010_200_43200.raw /home/data/EN480/raw/wh300/en2010_200_50400.raw /home/data/EN480/raw/wh300/en2010_200_57600.raw /home/data/EN480/raw/wh300/en2010_200_64800.raw /home/data/EN480/raw/wh300/en2010_200_72000.raw /home/data/EN480/raw/wh300/en2010_200_79200.raw /home/data/EN480/raw/wh300/en2010_201_00000.raw /home/data/EN480/raw/wh300/en2010_201_07200.raw /home/data/EN480/raw/wh300/en2010_201_14400.raw /home/data/EN480/raw/wh300/en2010_201_21600.raw /home/data/EN480/raw/wh300/en2010_201_28800.raw /home/data/EN480/raw/wh300/en2010_201_36000.raw /home/data/EN480/raw/wh300/en2010_201_43200.raw /home/data/EN480/raw/wh300/en2010_201_50400.raw /home/data/EN480/raw/wh300/en2010_201_57600.raw /home/data/EN480/raw/wh300/en2010_201_64800.raw /home/data/EN480/raw/wh300/en2010_201_72000.raw /home/data/EN480/raw/wh300/en2010_201_79200.raw /home/data/EN480/raw/wh300/en2010_202_00000.raw /home/data/EN480/raw/wh300/en2010_202_07200.raw /home/data/EN480/raw/wh300/en2010_202_14400.raw /home/data/EN480/raw/wh300/en2010_202_21600.raw /home/data/EN480/raw/wh300/en2010_202_28800.raw /home/data/EN480/raw/wh300/en2010_202_36000.raw /home/data/EN480/raw/wh300/en2010_202_43200.raw /home/data/EN480/raw/wh300/en2010_202_50400.raw /home/data/EN480/raw/wh300/en2010_202_57600.raw /home/data/EN480/raw/wh300/en2010_202_64800.raw /home/data/EN480/raw/wh300/en2010_202_72000.raw /home/data/EN480/raw/wh300/en2010_202_79200.raw /home/data/EN480/raw/wh300/en2010_203_00000.raw /home/data/EN480/raw/wh300/en2010_203_07200.raw /home/data/EN480/raw/wh300/en2010_203_14400.raw /home/data/EN480/raw/wh300/en2010_203_21600.raw /home/data/EN480/raw/wh300/en2010_203_28800.raw /home/data/EN480/raw/wh300/en2010_203_36000.raw /home/data/EN480/raw/wh300/en2010_203_43200.raw 2010-07-23 17:27:28,942 DEBUG quick_adcp LASTFILES invoked. using only 118 files from end of filelist 2010-07-23 17:27:28,942 DEBUG quick_adcp using delblks = 1 2010-07-23 17:27:28,942 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/EN480/raw/wh300/en2010_193_70010.raw /home/data/EN480/raw/wh300/en2010_193_72000.raw /home/data/EN480/raw/wh300/en2010_193_79200.raw /home/data/EN480/raw/wh300/en2010_194_00000.raw /home/data/EN480/raw/wh300/en2010_194_07200.raw /home/data/EN480/raw/wh300/en2010_194_14400.raw /home/data/EN480/raw/wh300/en2010_194_21600.raw /home/data/EN480/raw/wh300/en2010_194_28800.raw /home/data/EN480/raw/wh300/en2010_194_36000.raw /home/data/EN480/raw/wh300/en2010_194_43200.raw /home/data/EN480/raw/wh300/en2010_194_50400.raw /home/data/EN480/raw/wh300/en2010_194_57600.raw /home/data/EN480/raw/wh300/en2010_194_64800.raw /home/data/EN480/raw/wh300/en2010_194_72000.raw /home/data/EN480/raw/wh300/en2010_194_79200.raw /home/data/EN480/raw/wh300/en2010_195_00000.raw /home/data/EN480/raw/wh300/en2010_195_07200.raw /home/data/EN480/raw/wh300/en2010_195_14400.raw /home/data/EN480/raw/wh300/en2010_195_21600.raw /home/data/EN480/raw/wh300/en2010_195_28800.raw /home/data/EN480/raw/wh300/en2010_195_36000.raw /home/data/EN480/raw/wh300/en2010_195_43200.raw /home/data/EN480/raw/wh300/en2010_195_50400.raw /home/data/EN480/raw/wh300/en2010_195_57600.raw /home/data/EN480/raw/wh300/en2010_195_64800.raw /home/data/EN480/raw/wh300/en2010_195_72000.raw /home/data/EN480/raw/wh300/en2010_195_79200.raw /home/data/EN480/raw/wh300/en2010_196_00000.raw /home/data/EN480/raw/wh300/en2010_196_07200.raw /home/data/EN480/raw/wh300/en2010_196_14400.raw /home/data/EN480/raw/wh300/en2010_196_21600.raw /home/data/EN480/raw/wh300/en2010_196_28800.raw /home/data/EN480/raw/wh300/en2010_196_36000.raw /home/data/EN480/raw/wh300/en2010_196_43200.raw /home/data/EN480/raw/wh300/en2010_196_50400.raw /home/data/EN480/raw/wh300/en2010_196_57600.raw /home/data/EN480/raw/wh300/en2010_196_64800.raw /home/data/EN480/raw/wh300/en2010_196_72000.raw /home/data/EN480/raw/wh300/en2010_196_79200.raw /home/data/EN480/raw/wh300/en2010_197_00000.raw /home/data/EN480/raw/wh300/en2010_197_07200.raw /home/data/EN480/raw/wh300/en2010_197_14400.raw /home/data/EN480/raw/wh300/en2010_197_21600.raw /home/data/EN480/raw/wh300/en2010_197_28800.raw /home/data/EN480/raw/wh300/en2010_197_36000.raw /home/data/EN480/raw/wh300/en2010_197_43200.raw /home/data/EN480/raw/wh300/en2010_197_50400.raw /home/data/EN480/raw/wh300/en2010_197_57600.raw /home/data/EN480/raw/wh300/en2010_197_64800.raw /home/data/EN480/raw/wh300/en2010_197_72000.raw /home/data/EN480/raw/wh300/en2010_197_79200.raw /home/data/EN480/raw/wh300/en2010_198_00000.raw /home/data/EN480/raw/wh300/en2010_198_07200.raw /home/data/EN480/raw/wh300/en2010_198_14400.raw /home/data/EN480/raw/wh300/en2010_198_21600.raw /home/data/EN480/raw/wh300/en2010_198_28800.raw /home/data/EN480/raw/wh300/en2010_198_36000.raw /home/data/EN480/raw/wh300/en2010_198_43200.raw /home/data/EN480/raw/wh300/en2010_198_50400.raw /home/data/EN480/raw/wh300/en2010_198_57600.raw /home/data/EN480/raw/wh300/en2010_198_64800.raw /home/data/EN480/raw/wh300/en2010_198_72000.raw /home/data/EN480/raw/wh300/en2010_198_79200.raw /home/data/EN480/raw/wh300/en2010_199_00000.raw /home/data/EN480/raw/wh300/en2010_199_07200.raw /home/data/EN480/raw/wh300/en2010_199_14400.raw /home/data/EN480/raw/wh300/en2010_199_21600.raw /home/data/EN480/raw/wh300/en2010_199_28800.raw /home/data/EN480/raw/wh300/en2010_199_36000.raw /home/data/EN480/raw/wh300/en2010_199_43200.raw /home/data/EN480/raw/wh300/en2010_199_50400.raw /home/data/EN480/raw/wh300/en2010_199_57600.raw /home/data/EN480/raw/wh300/en2010_199_64800.raw /home/data/EN480/raw/wh300/en2010_199_72000.raw /home/data/EN480/raw/wh300/en2010_199_79200.raw /home/data/EN480/raw/wh300/en2010_200_00000.raw /home/data/EN480/raw/wh300/en2010_200_07200.raw /home/data/EN480/raw/wh300/en2010_200_14400.raw /home/data/EN480/raw/wh300/en2010_200_21600.raw /home/data/EN480/raw/wh300/en2010_200_28800.raw /home/data/EN480/raw/wh300/en2010_200_36000.raw /home/data/EN480/raw/wh300/en2010_200_43200.raw /home/data/EN480/raw/wh300/en2010_200_50400.raw /home/data/EN480/raw/wh300/en2010_200_57600.raw /home/data/EN480/raw/wh300/en2010_200_64800.raw /home/data/EN480/raw/wh300/en2010_200_72000.raw /home/data/EN480/raw/wh300/en2010_200_79200.raw /home/data/EN480/raw/wh300/en2010_201_00000.raw /home/data/EN480/raw/wh300/en2010_201_07200.raw /home/data/EN480/raw/wh300/en2010_201_14400.raw /home/data/EN480/raw/wh300/en2010_201_21600.raw /home/data/EN480/raw/wh300/en2010_201_28800.raw /home/data/EN480/raw/wh300/en2010_201_36000.raw /home/data/EN480/raw/wh300/en2010_201_43200.raw /home/data/EN480/raw/wh300/en2010_201_50400.raw /home/data/EN480/raw/wh300/en2010_201_57600.raw /home/data/EN480/raw/wh300/en2010_201_64800.raw /home/data/EN480/raw/wh300/en2010_201_72000.raw /home/data/EN480/raw/wh300/en2010_201_79200.raw /home/data/EN480/raw/wh300/en2010_202_00000.raw /home/data/EN480/raw/wh300/en2010_202_07200.raw /home/data/EN480/raw/wh300/en2010_202_14400.raw /home/data/EN480/raw/wh300/en2010_202_21600.raw /home/data/EN480/raw/wh300/en2010_202_28800.raw /home/data/EN480/raw/wh300/en2010_202_36000.raw /home/data/EN480/raw/wh300/en2010_202_43200.raw /home/data/EN480/raw/wh300/en2010_202_50400.raw /home/data/EN480/raw/wh300/en2010_202_57600.raw /home/data/EN480/raw/wh300/en2010_202_64800.raw /home/data/EN480/raw/wh300/en2010_202_72000.raw /home/data/EN480/raw/wh300/en2010_202_79200.raw /home/data/EN480/raw/wh300/en2010_203_00000.raw /home/data/EN480/raw/wh300/en2010_203_07200.raw /home/data/EN480/raw/wh300/en2010_203_14400.raw /home/data/EN480/raw/wh300/en2010_203_21600.raw /home/data/EN480/raw/wh300/en2010_203_28800.raw /home/data/EN480/raw/wh300/en2010_203_36000.raw /home/data/EN480/raw/wh300/en2010_203_43200.raw 2010-07-23 17:27:28,943 DEBUG quick_adcp Fri Jul 23 17:27:28 2010 running quick_adcp.py as follows: --cntfile /home/data/EN480/proc/wh300/wh300_qpy.cnt ----- adcpsect variables ------ afilebase a_en cbasename contour dbname a_en dbpath ../adcpdb deeper_boundaries [40, 60, 80, 100, 120] firstdepth 14 gridnum 80 increment 2 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2010 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_en allow_reload True auto True beamangle 20 bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase EN480 cfgpath /home/data/EN480/proc/wh300/config cntfile /home/data/EN480/proc/wh300/wh300_qpy.cnt commands None cruisename EN480 data_def vmadcp.def datadir /home/data/EN480/raw/wh300 datafile_glob *.raw datatype uhdas dbname a_en dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 120 ensgyrorbin False expert None filelist ['/home/data/EN480/raw/wh300/en2010_193_70010.raw', '/home/data/EN480/raw/wh300/en2010_193_72000.raw', '/home/data/EN480/raw/wh300/en2010_193_79200.raw', '/home/data/EN480/raw/wh300/en2010_194_00000.raw', '/home/data/EN480/raw/wh300/en2010_194_07200.raw', '/home/data/EN480/raw/wh300/en2010_194_14400.raw', '/home/data/EN480/raw/wh300/en2010_194_21600.raw', '/home/data/EN480/raw/wh300/en2010_194_28800.raw', '/home/data/EN480/raw/wh300/en2010_194_36000.raw', '/home/data/EN480/raw/wh300/en2010_194_43200.raw', '/home/data/EN480/raw/wh300/en2010_194_50400.raw', '/home/data/EN480/raw/wh300/en2010_194_57600.raw', '/home/data/EN480/raw/wh300/en2010_194_64800.raw', '/home/data/EN480/raw/wh300/en2010_194_72000.raw', '/home/data/EN480/raw/wh300/en2010_194_79200.raw', '/home/data/EN480/raw/wh300/en2010_195_00000.raw', '/home/data/EN480/raw/wh300/en2010_195_07200.raw', '/home/data/EN480/raw/wh300/en2010_195_14400.raw', '/home/data/EN480/raw/wh300/en2010_195_21600.raw', '/home/data/EN480/raw/wh300/en2010_195_28800.raw', '/home/data/EN480/raw/wh300/en2010_195_36000.raw', '/home/data/EN480/raw/wh300/en2010_195_43200.raw', '/home/data/EN480/raw/wh300/en2010_195_50400.raw', '/home/data/EN480/raw/wh300/en2010_195_57600.raw', '/home/data/EN480/raw/wh300/en2010_195_64800.raw', '/home/data/EN480/raw/wh300/en2010_195_72000.raw', '/home/data/EN480/raw/wh300/en2010_195_79200.raw', '/home/data/EN480/raw/wh300/en2010_196_00000.raw', '/home/data/EN480/raw/wh300/en2010_196_07200.raw', '/home/data/EN480/raw/wh300/en2010_196_14400.raw', '/home/data/EN480/raw/wh300/en2010_196_21600.raw', '/home/data/EN480/raw/wh300/en2010_196_28800.raw', '/home/data/EN480/raw/wh300/en2010_196_36000.raw', '/home/data/EN480/raw/wh300/en2010_196_43200.raw', '/home/data/EN480/raw/wh300/en2010_196_50400.raw', '/home/data/EN480/raw/wh300/en2010_196_57600.raw', '/home/data/EN480/raw/wh300/en2010_196_64800.raw', '/home/data/EN480/raw/wh300/en2010_196_72000.raw', '/home/data/EN480/raw/wh300/en2010_196_79200.raw', '/home/data/EN480/raw/wh300/en2010_197_00000.raw', '/home/data/EN480/raw/wh300/en2010_197_07200.raw', '/home/data/EN480/raw/wh300/en2010_197_14400.raw', '/home/data/EN480/raw/wh300/en2010_197_21600.raw', '/home/data/EN480/raw/wh300/en2010_197_28800.raw', '/home/data/EN480/raw/wh300/en2010_197_36000.raw', '/home/data/EN480/raw/wh300/en2010_197_43200.raw', '/home/data/EN480/raw/wh300/en2010_197_50400.raw', '/home/data/EN480/raw/wh300/en2010_197_57600.raw', '/home/data/EN480/raw/wh300/en2010_197_64800.raw', '/home/data/EN480/raw/wh300/en2010_197_72000.raw', '/home/data/EN480/raw/wh300/en2010_197_79200.raw', '/home/data/EN480/raw/wh300/en2010_198_00000.raw', '/home/data/EN480/raw/wh300/en2010_198_07200.raw', '/home/data/EN480/raw/wh300/en2010_198_14400.raw', '/home/data/EN480/raw/wh300/en2010_198_21600.raw', '/home/data/EN480/raw/wh300/en2010_198_28800.raw', '/home/data/EN480/raw/wh300/en2010_198_36000.raw', '/home/data/EN480/raw/wh300/en2010_198_43200.raw', '/home/data/EN480/raw/wh300/en2010_198_50400.raw', '/home/data/EN480/raw/wh300/en2010_198_57600.raw', '/home/data/EN480/raw/wh300/en2010_198_64800.raw', '/home/data/EN480/raw/wh300/en2010_198_72000.raw', '/home/data/EN480/raw/wh300/en2010_198_79200.raw', '/home/data/EN480/raw/wh300/en2010_199_00000.raw', '/home/data/EN480/raw/wh300/en2010_199_07200.raw', '/home/data/EN480/raw/wh300/en2010_199_14400.raw', 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'/home/data/EN480/raw/wh300/en2010_200_72000.raw', '/home/data/EN480/raw/wh300/en2010_200_79200.raw', '/home/data/EN480/raw/wh300/en2010_201_00000.raw', '/home/data/EN480/raw/wh300/en2010_201_07200.raw', '/home/data/EN480/raw/wh300/en2010_201_14400.raw', '/home/data/EN480/raw/wh300/en2010_201_21600.raw', '/home/data/EN480/raw/wh300/en2010_201_28800.raw', '/home/data/EN480/raw/wh300/en2010_201_36000.raw', '/home/data/EN480/raw/wh300/en2010_201_43200.raw', '/home/data/EN480/raw/wh300/en2010_201_50400.raw', '/home/data/EN480/raw/wh300/en2010_201_57600.raw', '/home/data/EN480/raw/wh300/en2010_201_64800.raw', '/home/data/EN480/raw/wh300/en2010_201_72000.raw', '/home/data/EN480/raw/wh300/en2010_201_79200.raw', '/home/data/EN480/raw/wh300/en2010_202_00000.raw', '/home/data/EN480/raw/wh300/en2010_202_07200.raw', '/home/data/EN480/raw/wh300/en2010_202_14400.raw', '/home/data/EN480/raw/wh300/en2010_202_21600.raw', '/home/data/EN480/raw/wh300/en2010_202_28800.raw', '/home/data/EN480/raw/wh300/en2010_202_36000.raw', '/home/data/EN480/raw/wh300/en2010_202_43200.raw', '/home/data/EN480/raw/wh300/en2010_202_50400.raw', '/home/data/EN480/raw/wh300/en2010_202_57600.raw', '/home/data/EN480/raw/wh300/en2010_202_64800.raw', '/home/data/EN480/raw/wh300/en2010_202_72000.raw', '/home/data/EN480/raw/wh300/en2010_202_79200.raw', '/home/data/EN480/raw/wh300/en2010_203_00000.raw', '/home/data/EN480/raw/wh300/en2010_203_07200.raw', '/home/data/EN480/raw/wh300/en2010_203_14400.raw', '/home/data/EN480/raw/wh300/en2010_203_21600.raw', '/home/data/EN480/raw/wh300/en2010_203_28800.raw', '/home/data/EN480/raw/wh300/en2010_203_36000.raw', '/home/data/EN480/raw/wh300/en2010_203_43200.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 14 fixfile a_en.gps hcorr_inst ashpaq2 head_func None help False hidedisplay True howto_lta False howto_ping False instclass wh instname wh300 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = wh; instname = 'wh300'; pingtype = 'bb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'EN480',... 'cfgpath' , '/home/data/EN480/proc/wh300/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_en.gps overview False pgmin 50 ping_headcorr True pingtype bb post_headcorr False proc_yearbase 2010 procdir wh300 progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/EN480/raw/wh300/en2010_193_70010.raw', '/home/data/EN480/raw/wh300/en2010_193_72000.raw', '/home/data/EN480/raw/wh300/en2010_193_79200.raw', '/home/data/EN480/raw/wh300/en2010_194_00000.raw', '/home/data/EN480/raw/wh300/en2010_194_07200.raw', '/home/data/EN480/raw/wh300/en2010_194_14400.raw', '/home/data/EN480/raw/wh300/en2010_194_21600.raw', '/home/data/EN480/raw/wh300/en2010_194_28800.raw', '/home/data/EN480/raw/wh300/en2010_194_36000.raw', '/home/data/EN480/raw/wh300/en2010_194_43200.raw', '/home/data/EN480/raw/wh300/en2010_194_50400.raw', '/home/data/EN480/raw/wh300/en2010_194_57600.raw', '/home/data/EN480/raw/wh300/en2010_194_64800.raw', '/home/data/EN480/raw/wh300/en2010_194_72000.raw', '/home/data/EN480/raw/wh300/en2010_194_79200.raw', '/home/data/EN480/raw/wh300/en2010_195_00000.raw', '/home/data/EN480/raw/wh300/en2010_195_07200.raw', '/home/data/EN480/raw/wh300/en2010_195_14400.raw', '/home/data/EN480/raw/wh300/en2010_195_21600.raw', '/home/data/EN480/raw/wh300/en2010_195_28800.raw', '/home/data/EN480/raw/wh300/en2010_195_36000.raw', '/home/data/EN480/raw/wh300/en2010_195_43200.raw', '/home/data/EN480/raw/wh300/en2010_195_50400.raw', '/home/data/EN480/raw/wh300/en2010_195_57600.raw', '/home/data/EN480/raw/wh300/en2010_195_64800.raw', '/home/data/EN480/raw/wh300/en2010_195_72000.raw', '/home/data/EN480/raw/wh300/en2010_195_79200.raw', '/home/data/EN480/raw/wh300/en2010_196_00000.raw', '/home/data/EN480/raw/wh300/en2010_196_07200.raw', '/home/data/EN480/raw/wh300/en2010_196_14400.raw', '/home/data/EN480/raw/wh300/en2010_196_21600.raw', '/home/data/EN480/raw/wh300/en2010_196_28800.raw', '/home/data/EN480/raw/wh300/en2010_196_36000.raw', '/home/data/EN480/raw/wh300/en2010_196_43200.raw', '/home/data/EN480/raw/wh300/en2010_196_50400.raw', '/home/data/EN480/raw/wh300/en2010_196_57600.raw', '/home/data/EN480/raw/wh300/en2010_196_64800.raw', '/home/data/EN480/raw/wh300/en2010_196_72000.raw', '/home/data/EN480/raw/wh300/en2010_196_79200.raw', '/home/data/EN480/raw/wh300/en2010_197_00000.raw', '/home/data/EN480/raw/wh300/en2010_197_07200.raw', '/home/data/EN480/raw/wh300/en2010_197_14400.raw', '/home/data/EN480/raw/wh300/en2010_197_21600.raw', '/home/data/EN480/raw/wh300/en2010_197_28800.raw', '/home/data/EN480/raw/wh300/en2010_197_36000.raw', '/home/data/EN480/raw/wh300/en2010_197_43200.raw', '/home/data/EN480/raw/wh300/en2010_197_50400.raw', '/home/data/EN480/raw/wh300/en2010_197_57600.raw', '/home/data/EN480/raw/wh300/en2010_197_64800.raw', '/home/data/EN480/raw/wh300/en2010_197_72000.raw', '/home/data/EN480/raw/wh300/en2010_197_79200.raw', '/home/data/EN480/raw/wh300/en2010_198_00000.raw', '/home/data/EN480/raw/wh300/en2010_198_07200.raw', '/home/data/EN480/raw/wh300/en2010_198_14400.raw', '/home/data/EN480/raw/wh300/en2010_198_21600.raw', '/home/data/EN480/raw/wh300/en2010_198_28800.raw', '/home/data/EN480/raw/wh300/en2010_198_36000.raw', '/home/data/EN480/raw/wh300/en2010_198_43200.raw', '/home/data/EN480/raw/wh300/en2010_198_50400.raw', '/home/data/EN480/raw/wh300/en2010_198_57600.raw', '/home/data/EN480/raw/wh300/en2010_198_64800.raw', '/home/data/EN480/raw/wh300/en2010_198_72000.raw', '/home/data/EN480/raw/wh300/en2010_198_79200.raw', '/home/data/EN480/raw/wh300/en2010_199_00000.raw', '/home/data/EN480/raw/wh300/en2010_199_07200.raw', '/home/data/EN480/raw/wh300/en2010_199_14400.raw', '/home/data/EN480/raw/wh300/en2010_199_21600.raw', '/home/data/EN480/raw/wh300/en2010_199_28800.raw', '/home/data/EN480/raw/wh300/en2010_199_36000.raw', '/home/data/EN480/raw/wh300/en2010_199_43200.raw', '/home/data/EN480/raw/wh300/en2010_199_50400.raw', '/home/data/EN480/raw/wh300/en2010_199_57600.raw', '/home/data/EN480/raw/wh300/en2010_199_64800.raw', '/home/data/EN480/raw/wh300/en2010_199_72000.raw', '/home/data/EN480/raw/wh300/en2010_199_79200.raw', '/home/data/EN480/raw/wh300/en2010_200_00000.raw', '/home/data/EN480/raw/wh300/en2010_200_07200.raw', '/home/data/EN480/raw/wh300/en2010_200_14400.raw', '/home/data/EN480/raw/wh300/en2010_200_21600.raw', '/home/data/EN480/raw/wh300/en2010_200_28800.raw', '/home/data/EN480/raw/wh300/en2010_200_36000.raw', '/home/data/EN480/raw/wh300/en2010_200_43200.raw', '/home/data/EN480/raw/wh300/en2010_200_50400.raw', '/home/data/EN480/raw/wh300/en2010_200_57600.raw', '/home/data/EN480/raw/wh300/en2010_200_64800.raw', '/home/data/EN480/raw/wh300/en2010_200_72000.raw', '/home/data/EN480/raw/wh300/en2010_200_79200.raw', '/home/data/EN480/raw/wh300/en2010_201_00000.raw', '/home/data/EN480/raw/wh300/en2010_201_07200.raw', '/home/data/EN480/raw/wh300/en2010_201_14400.raw', '/home/data/EN480/raw/wh300/en2010_201_21600.raw', '/home/data/EN480/raw/wh300/en2010_201_28800.raw', '/home/data/EN480/raw/wh300/en2010_201_36000.raw', '/home/data/EN480/raw/wh300/en2010_201_43200.raw', '/home/data/EN480/raw/wh300/en2010_201_50400.raw', '/home/data/EN480/raw/wh300/en2010_201_57600.raw', '/home/data/EN480/raw/wh300/en2010_201_64800.raw', '/home/data/EN480/raw/wh300/en2010_201_72000.raw', '/home/data/EN480/raw/wh300/en2010_201_79200.raw', '/home/data/EN480/raw/wh300/en2010_202_00000.raw', '/home/data/EN480/raw/wh300/en2010_202_07200.raw', '/home/data/EN480/raw/wh300/en2010_202_14400.raw', '/home/data/EN480/raw/wh300/en2010_202_21600.raw', '/home/data/EN480/raw/wh300/en2010_202_28800.raw', '/home/data/EN480/raw/wh300/en2010_202_36000.raw', '/home/data/EN480/raw/wh300/en2010_202_43200.raw', '/home/data/EN480/raw/wh300/en2010_202_50400.raw', '/home/data/EN480/raw/wh300/en2010_202_57600.raw', '/home/data/EN480/raw/wh300/en2010_202_64800.raw', '/home/data/EN480/raw/wh300/en2010_202_72000.raw', '/home/data/EN480/raw/wh300/en2010_202_79200.raw', '/home/data/EN480/raw/wh300/en2010_203_00000.raw', '/home/data/EN480/raw/wh300/en2010_203_07200.raw', '/home/data/EN480/raw/wh300/en2010_203_14400.raw', '/home/data/EN480/raw/wh300/en2010_203_21600.raw', '/home/data/EN480/raw/wh300/en2010_203_28800.raw', '/home/data/EN480/raw/wh300/en2010_203_36000.raw', '/home/data/EN480/raw/wh300/en2010_203_43200.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2010 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-07-23 17:27:28,944 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2010-07-23 17:27:28,944 DEBUG quick_run scanning files for time ranges... 2010-07-23 17:27:28,944 DEBUG quick_setup starting in /home/data/EN480/proc/wh300/scan 2010-07-23 17:27:28,944 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/scan 2010-07-23 17:27:28,944 DEBUG quick_setup running python command "method" 2010-07-23 17:27:28,944 DEBUG call_matlab --> clear all 2010-07-23 17:27:28,947 DEBUG call_matlab <-- >> 2010-07-23 17:27:28,947 DEBUG call_matlab --> close all 2010-07-23 17:27:28,981 DEBUG call_matlab <-- >> 2010-07-23 17:27:28,981 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/scan 2010-07-23 17:27:28,983 DEBUG call_matlab <-- >> 2010-07-23 17:27:28,983 DEBUG call_matlab --> scan_tmp 2010-07-23 17:27:29,426 DEBUG call_matlab <-- getting config files from "/home/data/EN480/proc/wh300/config" running "EN480_cfg.m" running "EN480_proc.m" writing scan info to a_en.scn >> 2010-07-23 17:27:29,427 DEBUG quick_run writing time range from a_en.scn to a_en.tr 2010-07-23 17:27:29,427 DEBUG quick_run getting scan time range 2010-07-23 17:27:29,427 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,427 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/scan 2010-07-23 17:27:29,427 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,427 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,428 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,428 DEBUG quick_subs start_end_time 2010/07/13 19:26:51 to 2010/07/23 12:43:58 2010-07-23 17:27:29,428 DEBUG quick_subs dd0: 193.810313 dd1: 203.530532 2010-07-23 17:27:29,429 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/EN480/proc/wh300 2010-07-23 17:27:29,429 DEBUG quick_adcp looking for database with adcpdb/a_en*.blk 2010-07-23 17:27:29,429 DEBUG quick_adcp database found: listing blocks 2010-07-23 17:27:29,429 DEBUG quick_subs removing a_endir.blk 2010-07-23 17:27:29,430 DEBUG quick_subs about to run mkblkdir 2010-07-23 17:27:29,430 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-07-23 17:27:29,430 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-07-23 17:27:29,438 DEBUG quick_subs database passes. 2010-07-23 17:27:29,438 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,438 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,438 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,439 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,439 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,439 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,439 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,439 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,440 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,440 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,440 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,440 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,440 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,440 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,441 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,441 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,441 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2010-07-23 17:27:29,441 DEBUG quick_adcp origdb_time_range is 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,441 DEBUG quick_adcp (193.811725 to 203.529907) 2010-07-23 17:27:29,441 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2010-07-23 17:27:29,442 DEBUG quick_subs getting current (remaining after deletion) database times 2010-07-23 17:27:29,442 DEBUG quick_subs ['adcpdb/a_en007.blk', 'adcpdb/a_en023.blk', 'adcpdb/a_en008.blk', 'adcpdb/a_en002.blk', 'adcpdb/a_en035.blk', 'adcpdb/a_endir.blk', 'adcpdb/a_en018.blk', 'adcpdb/a_en043.blk', 'adcpdb/a_en005.blk', 'adcpdb/a_en045.blk', 'adcpdb/a_en024.blk', 'adcpdb/a_en026.blk', 'adcpdb/a_en030.blk', 'adcpdb/a_en017.blk', 'adcpdb/a_en040.blk', 'adcpdb/a_en027.blk', 'adcpdb/a_en048.blk', 'adcpdb/a_en006.blk', 'adcpdb/a_en046.blk', 'adcpdb/a_en003.blk', 'adcpdb/a_en039.blk', 'adcpdb/a_en009.blk', 'adcpdb/a_en025.blk', 'adcpdb/a_en047.blk', 'adcpdb/a_en042.blk', 'adcpdb/a_en001.blk', 'adcpdb/a_en044.blk', 'adcpdb/a_en020.blk', 'adcpdb/a_en016.blk', 'adcpdb/a_en019.blk', 'adcpdb/a_en034.blk', 'adcpdb/a_en011.blk', 'adcpdb/a_en022.blk', 'adcpdb/a_en036.blk', 'adcpdb/a_en014.blk', 'adcpdb/a_en028.blk', 'adcpdb/a_en029.blk', 'adcpdb/a_en031.blk', 'adcpdb/a_en004.blk', 'adcpdb/a_en038.blk', 'adcpdb/a_en013.blk', 'adcpdb/a_en037.blk', 'adcpdb/a_en010.blk', 'adcpdb/a_en021.blk', 'adcpdb/a_en041.blk', 'adcpdb/a_en033.blk', 'adcpdb/a_en032.blk', 'adcpdb/a_en012.blk', 'adcpdb/a_en015.blk'] 2010-07-23 17:27:29,442 DEBUG quick_subs length is 49 2010-07-23 17:27:29,442 DEBUG quick_subs removing a_endir.blk 2010-07-23 17:27:29,442 DEBUG quick_subs about to run mkblkdir 2010-07-23 17:27:29,442 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-07-23 17:27:29,443 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-07-23 17:27:29,450 DEBUG quick_subs database passes. 2010-07-23 17:27:29,450 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,451 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,451 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,451 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,451 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,451 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,452 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,452 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,452 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,452 DEBUG quick_subs reading time range 2010-07-23 17:27:29,452 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,452 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,453 INFO quick_subs Fri Jul 23 17:27:29 2010 2010-07-23 17:27:29,453 INFO quick_subs checking database time range by listblk 2010-07-23 17:27:29,453 DEBUG quick_subs removing a_endir.blk 2010-07-23 17:27:29,453 DEBUG quick_subs about to run mkblkdir 2010-07-23 17:27:29,453 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-07-23 17:27:29,453 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-07-23 17:27:29,461 DEBUG quick_subs database passes. 2010-07-23 17:27:29,461 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,461 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,461 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,462 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,462 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,462 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,462 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,462 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,464 INFO quick_subs found line /* 0 n= 146 a_en001.blk */ 2010/07/13 19:28:53 to 2010/07/14 00:20:05 2010-07-23 17:27:29,464 INFO quick_subs found line /* 1 n= 146 a_en002.blk */ 2010/07/14 00:22:05 to 2010/07/14 05:13:16 2010-07-23 17:27:29,464 INFO quick_subs found line /* 2 n= 146 a_en003.blk */ 2010/07/14 05:15:17 to 2010/07/14 10:06:13 2010-07-23 17:27:29,464 INFO quick_subs found line /* 3 n= 146 a_en004.blk */ 2010/07/14 10:08:13 to 2010/07/14 14:59:04 2010-07-23 17:27:29,464 INFO quick_subs found line /* 4 n= 146 a_en005.blk */ 2010/07/14 15:01:04 to 2010/07/14 19:51:59 2010-07-23 17:27:29,464 INFO quick_subs found line /* 5 n= 146 a_en006.blk */ 2010/07/14 19:54:00 to 2010/07/15 00:45:00 2010-07-23 17:27:29,464 INFO quick_subs found line /* 6 n= 146 a_en007.blk */ 2010/07/15 00:47:00 to 2010/07/15 05:38:06 2010-07-23 17:27:29,464 INFO quick_subs found line /* 7 n= 146 a_en008.blk */ 2010/07/15 05:40:07 to 2010/07/15 10:31:09 2010-07-23 17:27:29,464 INFO quick_subs found line /* 8 n= 146 a_en009.blk */ 2010/07/15 10:33:09 to 2010/07/15 15:23:57 2010-07-23 17:27:29,465 INFO quick_subs found line /* 9 n= 146 a_en010.blk */ 2010/07/15 15:25:57 to 2010/07/15 20:16:40 2010-07-23 17:27:29,465 INFO quick_subs found line /* 10 n= 146 a_en011.blk */ 2010/07/15 20:18:40 to 2010/07/16 01:09:30 2010-07-23 17:27:29,465 INFO quick_subs found line /* 11 n= 146 a_en012.blk */ 2010/07/16 01:11:31 to 2010/07/16 06:02:29 2010-07-23 17:27:29,465 INFO quick_subs found line /* 12 n= 146 a_en013.blk */ 2010/07/16 06:04:29 to 2010/07/16 10:55:27 2010-07-23 17:27:29,465 INFO quick_subs found line /* 13 n= 146 a_en014.blk */ 2010/07/16 10:57:28 to 2010/07/16 15:48:24 2010-07-23 17:27:29,465 INFO quick_subs found line /* 14 n= 146 a_en015.blk */ 2010/07/16 15:50:25 to 2010/07/16 20:41:17 2010-07-23 17:27:29,465 INFO quick_subs found line /* 15 n= 146 a_en016.blk */ 2010/07/16 20:43:17 to 2010/07/17 01:34:33 2010-07-23 17:27:29,465 INFO quick_subs found line /* 16 n= 146 a_en017.blk */ 2010/07/17 01:36:34 to 2010/07/17 06:27:57 2010-07-23 17:27:29,465 INFO quick_subs found line /* 17 n= 146 a_en018.blk */ 2010/07/17 06:29:58 to 2010/07/17 11:21:21 2010-07-23 17:27:29,466 INFO quick_subs found line /* 18 n= 146 a_en019.blk */ 2010/07/17 11:23:21 to 2010/07/17 16:14:12 2010-07-23 17:27:29,466 INFO quick_subs found line /* 19 n= 146 a_en020.blk */ 2010/07/17 16:16:12 to 2010/07/17 21:07:01 2010-07-23 17:27:29,466 INFO quick_subs found line /* 20 n= 146 a_en021.blk */ 2010/07/17 21:09:01 to 2010/07/18 02:00:16 2010-07-23 17:27:29,466 INFO quick_subs found line /* 21 n= 146 a_en022.blk */ 2010/07/18 02:02:16 to 2010/07/18 06:53:41 2010-07-23 17:27:29,466 INFO quick_subs found line /* 22 n= 146 a_en023.blk */ 2010/07/18 06:55:42 to 2010/07/18 11:48:36 2010-07-23 17:27:29,466 INFO quick_subs found line /* 23 n= 146 a_en024.blk */ 2010/07/18 11:50:36 to 2010/07/18 16:41:21 2010-07-23 17:27:29,466 INFO quick_subs found line /* 24 n= 146 a_en025.blk */ 2010/07/18 16:43:22 to 2010/07/18 21:34:04 2010-07-23 17:27:29,466 INFO quick_subs found line /* 25 n= 146 a_en026.blk */ 2010/07/18 21:36:04 to 2010/07/19 02:27:33 2010-07-23 17:27:29,467 INFO quick_subs found line /* 26 n= 146 a_en027.blk */ 2010/07/19 02:29:34 to 2010/07/19 07:21:02 2010-07-23 17:27:29,467 INFO quick_subs found line /* 27 n= 146 a_en028.blk */ 2010/07/19 07:23:02 to 2010/07/19 12:13:54 2010-07-23 17:27:29,467 INFO quick_subs found line /* 28 n= 146 a_en029.blk */ 2010/07/19 12:15:54 to 2010/07/19 17:06:41 2010-07-23 17:27:29,467 INFO quick_subs found line /* 29 n= 146 a_en030.blk */ 2010/07/19 17:08:42 to 2010/07/19 21:59:25 2010-07-23 17:27:29,467 INFO quick_subs found line /* 30 n= 146 a_en031.blk */ 2010/07/19 22:01:25 to 2010/07/20 02:52:32 2010-07-23 17:27:29,467 INFO quick_subs found line /* 31 n= 146 a_en032.blk */ 2010/07/20 02:54:32 to 2010/07/20 07:45:29 2010-07-23 17:27:29,467 INFO quick_subs found line /* 32 n= 146 a_en033.blk */ 2010/07/20 07:47:30 to 2010/07/20 12:40:00 2010-07-23 17:27:29,467 INFO quick_subs found line /* 33 n= 146 a_en034.blk */ 2010/07/20 12:42:01 to 2010/07/20 17:32:26 2010-07-23 17:27:29,467 INFO quick_subs found line /* 34 n= 146 a_en035.blk */ 2010/07/20 17:34:27 to 2010/07/20 22:25:06 2010-07-23 17:27:29,468 INFO quick_subs found line /* 35 n= 146 a_en036.blk */ 2010/07/20 22:27:06 to 2010/07/21 03:18:05 2010-07-23 17:27:29,468 INFO quick_subs found line /* 36 n= 146 a_en037.blk */ 2010/07/21 03:20:05 to 2010/07/21 08:10:39 2010-07-23 17:27:29,468 INFO quick_subs found line /* 37 n= 146 a_en038.blk */ 2010/07/21 08:12:40 to 2010/07/21 13:03:27 2010-07-23 17:27:29,468 INFO quick_subs found line /* 38 n= 146 a_en039.blk */ 2010/07/21 13:05:27 to 2010/07/21 17:56:01 2010-07-23 17:27:29,468 INFO quick_subs found line /* 39 n= 146 a_en040.blk */ 2010/07/21 17:58:01 to 2010/07/21 22:48:26 2010-07-23 17:27:29,468 INFO quick_subs found line /* 40 n= 146 a_en041.blk */ 2010/07/21 22:50:27 to 2010/07/22 03:41:20 2010-07-23 17:27:29,468 INFO quick_subs found line /* 41 n= 146 a_en042.blk */ 2010/07/22 03:43:20 to 2010/07/22 08:34:10 2010-07-23 17:27:29,468 INFO quick_subs found line /* 42 n= 146 a_en043.blk */ 2010/07/22 08:36:10 to 2010/07/22 13:26:38 2010-07-23 17:27:29,468 INFO quick_subs found line /* 43 n= 146 a_en044.blk */ 2010/07/22 13:28:38 to 2010/07/22 18:19:26 2010-07-23 17:27:29,469 INFO quick_subs found line /* 44 n= 146 a_en045.blk */ 2010/07/22 18:21:27 to 2010/07/22 23:12:25 2010-07-23 17:27:29,469 INFO quick_subs found line /* 45 n= 146 a_en046.blk */ 2010/07/22 23:14:26 to 2010/07/23 04:05:22 2010-07-23 17:27:29,469 INFO quick_subs found line /* 46 n= 146 a_en047.blk */ 2010/07/23 04:07:22 to 2010/07/23 08:58:20 2010-07-23 17:27:29,469 INFO quick_subs found line /* 47 n= 112 a_en048.blk */ 2010/07/23 09:00:21 to 2010/07/23 12:43:04 2010-07-23 17:27:29,469 INFO quick_subs scan data start at 193.8103125 2010-07-23 17:27:29,469 INFO quick_subs scan time range: 2010/07/13 19:26:51 to 2010/07/23 12:43:58 2010-07-23 17:27:29,469 INFO quick_subs codasdb ends at 203.5299074 (2010/07/23 12:43:04) 2010-07-23 17:27:29,469 DEBUG quick_subs ... changed dirs, in /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,470 DEBUG quick_subs deleting these files: ['a_en048.blk'] 2010-07-23 17:27:29,470 DEBUG quick_subs getting current (remaining after deletion) database times 2010-07-23 17:27:29,470 DEBUG quick_subs ['adcpdb/a_en007.blk', 'adcpdb/a_en023.blk', 'adcpdb/a_en008.blk', 'adcpdb/a_en002.blk', 'adcpdb/a_en035.blk', 'adcpdb/a_en018.blk', 'adcpdb/a_en043.blk', 'adcpdb/a_en005.blk', 'adcpdb/a_en045.blk', 'adcpdb/a_en024.blk', 'adcpdb/a_en026.blk', 'adcpdb/a_en030.blk', 'adcpdb/a_en017.blk', 'adcpdb/a_en040.blk', 'adcpdb/a_en027.blk', 'adcpdb/a_en006.blk', 'adcpdb/a_en046.blk', 'adcpdb/a_en003.blk', 'adcpdb/a_en039.blk', 'adcpdb/a_en009.blk', 'adcpdb/a_en025.blk', 'adcpdb/a_en047.blk', 'adcpdb/a_en042.blk', 'adcpdb/a_en001.blk', 'adcpdb/a_en044.blk', 'adcpdb/a_en020.blk', 'adcpdb/a_en016.blk', 'adcpdb/a_en019.blk', 'adcpdb/a_en034.blk', 'adcpdb/a_en011.blk', 'adcpdb/a_en022.blk', 'adcpdb/a_en036.blk', 'adcpdb/a_en014.blk', 'adcpdb/a_en028.blk', 'adcpdb/a_en029.blk', 'adcpdb/a_en031.blk', 'adcpdb/a_en004.blk', 'adcpdb/a_en038.blk', 'adcpdb/a_en013.blk', 'adcpdb/a_en037.blk', 'adcpdb/a_en010.blk', 'adcpdb/a_en021.blk', 'adcpdb/a_en041.blk', 'adcpdb/a_en033.blk', 'adcpdb/a_en032.blk', 'adcpdb/a_en012.blk', 'adcpdb/a_en015.blk'] 2010-07-23 17:27:29,470 DEBUG quick_subs length is 47 2010-07-23 17:27:29,471 DEBUG quick_subs about to run mkblkdir 2010-07-23 17:27:29,471 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-07-23 17:27:29,471 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-07-23 17:27:29,478 DEBUG quick_subs database passes. 2010-07-23 17:27:29,479 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,479 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,479 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,479 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,479 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,480 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,480 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 08:58:20 2010-07-23 17:27:29,480 DEBUG quick_subs dd0: 193.811725 dd1: 203.373843 2010-07-23 17:27:29,480 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,480 DEBUG quick_subs reading time range 2010-07-23 17:27:29,480 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 08:58:20 2010-07-23 17:27:29,480 DEBUG quick_subs dd0: 193.811725 dd1: 203.373843 2010-07-23 17:27:29,481 DEBUG quick_subs codas database currently goes from 2010/07/13 19:28:53 to 2010/07/23 08:58:20 2010-07-23 17:27:29,481 DEBUG quick_subs (193.811725 to 203.373843) 2010-07-23 17:27:29,481 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019found existing adcpdb blocks: %s 020found existing adcpdb blocks: %s 021found existing adcpdb blocks: %s 022found existing adcpdb blocks: %s 023found existing adcpdb blocks: %s 024found existing adcpdb blocks: %s 025found existing adcpdb blocks: %s 026found existing adcpdb blocks: %s 027found existing adcpdb blocks: %s 028found existing adcpdb blocks: %s 029found existing adcpdb blocks: %s 030found existing adcpdb blocks: %s 031found existing adcpdb blocks: %s 032found existing adcpdb blocks: %s 033found existing adcpdb blocks: %s 034found existing adcpdb blocks: %s 035found existing adcpdb blocks: %s 036found existing adcpdb blocks: %s 037found existing adcpdb blocks: %s 038found existing adcpdb blocks: %s 039found existing adcpdb blocks: %s 040found existing adcpdb blocks: %s 041found existing adcpdb blocks: %s 042found existing adcpdb blocks: %s 043found existing adcpdb blocks: %s 044found existing adcpdb blocks: %s 045found existing adcpdb blocks: %s 046found existing adcpdb blocks: %s 047 2010-07-23 17:27:29,482 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 021 022 023 024 025 026 027 028 029 030 031 032 033 034 035 036 037 038 039 040 041 042 043 044 045 046 047 048 2010-07-23 17:27:29,482 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047'] 2010-07-23 17:27:29,483 DEBUG quick_subs checked: unloaded blkstrs: ['048'] 2010-07-23 17:27:29,483 DEBUG quick_subs first unloaded file is load/ens_blk048.cmd 2010-07-23 17:27:29,483 DEBUG quick_subs data goes from 2010/07/23 09:00:21 to 2010/07/23 12:43:58 2010-07-23 17:27:29,483 DEBUG quick_subs (203.375243 to 203.530532) 2010-07-23 17:27:29,483 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/EN480/raw/wh300/en2010_193_70010.raw /home/data/EN480/raw/wh300/en2010_193_72000.raw /home/data/EN480/raw/wh300/en2010_193_79200.raw /home/data/EN480/raw/wh300/en2010_194_00000.raw /home/data/EN480/raw/wh300/en2010_194_07200.raw /home/data/EN480/raw/wh300/en2010_194_14400.raw /home/data/EN480/raw/wh300/en2010_194_21600.raw /home/data/EN480/raw/wh300/en2010_194_28800.raw /home/data/EN480/raw/wh300/en2010_194_36000.raw /home/data/EN480/raw/wh300/en2010_194_43200.raw /home/data/EN480/raw/wh300/en2010_194_50400.raw /home/data/EN480/raw/wh300/en2010_194_57600.raw /home/data/EN480/raw/wh300/en2010_194_64800.raw /home/data/EN480/raw/wh300/en2010_194_72000.raw /home/data/EN480/raw/wh300/en2010_194_79200.raw /home/data/EN480/raw/wh300/en2010_195_00000.raw /home/data/EN480/raw/wh300/en2010_195_07200.raw /home/data/EN480/raw/wh300/en2010_195_14400.raw /home/data/EN480/raw/wh300/en2010_195_21600.raw /home/data/EN480/raw/wh300/en2010_195_28800.raw /home/data/EN480/raw/wh300/en2010_195_36000.raw /home/data/EN480/raw/wh300/en2010_195_43200.raw /home/data/EN480/raw/wh300/en2010_195_50400.raw /home/data/EN480/raw/wh300/en2010_195_57600.raw /home/data/EN480/raw/wh300/en2010_195_64800.raw /home/data/EN480/raw/wh300/en2010_195_72000.raw /home/data/EN480/raw/wh300/en2010_195_79200.raw /home/data/EN480/raw/wh300/en2010_196_00000.raw /home/data/EN480/raw/wh300/en2010_196_07200.raw /home/data/EN480/raw/wh300/en2010_196_14400.raw /home/data/EN480/raw/wh300/en2010_196_21600.raw /home/data/EN480/raw/wh300/en2010_196_28800.raw /home/data/EN480/raw/wh300/en2010_196_36000.raw /home/data/EN480/raw/wh300/en2010_196_43200.raw /home/data/EN480/raw/wh300/en2010_196_50400.raw /home/data/EN480/raw/wh300/en2010_196_57600.raw /home/data/EN480/raw/wh300/en2010_196_64800.raw /home/data/EN480/raw/wh300/en2010_196_72000.raw /home/data/EN480/raw/wh300/en2010_196_79200.raw /home/data/EN480/raw/wh300/en2010_197_00000.raw /home/data/EN480/raw/wh300/en2010_197_07200.raw /home/data/EN480/raw/wh300/en2010_197_14400.raw /home/data/EN480/raw/wh300/en2010_197_21600.raw /home/data/EN480/raw/wh300/en2010_197_28800.raw /home/data/EN480/raw/wh300/en2010_197_36000.raw /home/data/EN480/raw/wh300/en2010_197_43200.raw /home/data/EN480/raw/wh300/en2010_197_50400.raw /home/data/EN480/raw/wh300/en2010_197_57600.raw /home/data/EN480/raw/wh300/en2010_197_64800.raw /home/data/EN480/raw/wh300/en2010_197_72000.raw /home/data/EN480/raw/wh300/en2010_197_79200.raw /home/data/EN480/raw/wh300/en2010_198_00000.raw /home/data/EN480/raw/wh300/en2010_198_07200.raw /home/data/EN480/raw/wh300/en2010_198_14400.raw /home/data/EN480/raw/wh300/en2010_198_21600.raw /home/data/EN480/raw/wh300/en2010_198_28800.raw /home/data/EN480/raw/wh300/en2010_198_36000.raw /home/data/EN480/raw/wh300/en2010_198_43200.raw /home/data/EN480/raw/wh300/en2010_198_50400.raw /home/data/EN480/raw/wh300/en2010_198_57600.raw /home/data/EN480/raw/wh300/en2010_198_64800.raw /home/data/EN480/raw/wh300/en2010_198_72000.raw /home/data/EN480/raw/wh300/en2010_198_79200.raw /home/data/EN480/raw/wh300/en2010_199_00000.raw /home/data/EN480/raw/wh300/en2010_199_07200.raw /home/data/EN480/raw/wh300/en2010_199_14400.raw /home/data/EN480/raw/wh300/en2010_199_21600.raw /home/data/EN480/raw/wh300/en2010_199_28800.raw /home/data/EN480/raw/wh300/en2010_199_36000.raw /home/data/EN480/raw/wh300/en2010_199_43200.raw /home/data/EN480/raw/wh300/en2010_199_50400.raw /home/data/EN480/raw/wh300/en2010_199_57600.raw /home/data/EN480/raw/wh300/en2010_199_64800.raw /home/data/EN480/raw/wh300/en2010_199_72000.raw /home/data/EN480/raw/wh300/en2010_199_79200.raw /home/data/EN480/raw/wh300/en2010_200_00000.raw /home/data/EN480/raw/wh300/en2010_200_07200.raw /home/data/EN480/raw/wh300/en2010_200_14400.raw /home/data/EN480/raw/wh300/en2010_200_21600.raw /home/data/EN480/raw/wh300/en2010_200_28800.raw /home/data/EN480/raw/wh300/en2010_200_36000.raw /home/data/EN480/raw/wh300/en2010_200_43200.raw /home/data/EN480/raw/wh300/en2010_200_50400.raw /home/data/EN480/raw/wh300/en2010_200_57600.raw /home/data/EN480/raw/wh300/en2010_200_64800.raw /home/data/EN480/raw/wh300/en2010_200_72000.raw /home/data/EN480/raw/wh300/en2010_200_79200.raw /home/data/EN480/raw/wh300/en2010_201_00000.raw /home/data/EN480/raw/wh300/en2010_201_07200.raw /home/data/EN480/raw/wh300/en2010_201_14400.raw /home/data/EN480/raw/wh300/en2010_201_21600.raw /home/data/EN480/raw/wh300/en2010_201_28800.raw /home/data/EN480/raw/wh300/en2010_201_36000.raw /home/data/EN480/raw/wh300/en2010_201_43200.raw /home/data/EN480/raw/wh300/en2010_201_50400.raw /home/data/EN480/raw/wh300/en2010_201_57600.raw /home/data/EN480/raw/wh300/en2010_201_64800.raw /home/data/EN480/raw/wh300/en2010_201_72000.raw /home/data/EN480/raw/wh300/en2010_201_79200.raw /home/data/EN480/raw/wh300/en2010_202_00000.raw /home/data/EN480/raw/wh300/en2010_202_07200.raw /home/data/EN480/raw/wh300/en2010_202_14400.raw /home/data/EN480/raw/wh300/en2010_202_21600.raw /home/data/EN480/raw/wh300/en2010_202_28800.raw /home/data/EN480/raw/wh300/en2010_202_36000.raw /home/data/EN480/raw/wh300/en2010_202_43200.raw /home/data/EN480/raw/wh300/en2010_202_50400.raw /home/data/EN480/raw/wh300/en2010_202_57600.raw /home/data/EN480/raw/wh300/en2010_202_64800.raw /home/data/EN480/raw/wh300/en2010_202_72000.raw /home/data/EN480/raw/wh300/en2010_202_79200.raw /home/data/EN480/raw/wh300/en2010_203_00000.raw /home/data/EN480/raw/wh300/en2010_203_07200.raw /home/data/EN480/raw/wh300/en2010_203_14400.raw /home/data/EN480/raw/wh300/en2010_203_21600.raw /home/data/EN480/raw/wh300/en2010_203_28800.raw /home/data/EN480/raw/wh300/en2010_203_36000.raw /home/data/EN480/raw/wh300/en2010_203_43200.raw 2010-07-23 17:27:29,484 INFO quick_run Fri Jul 23 17:27:29 2010 2010-07-23 17:27:29,484 INFO quick_run about to load uhdas files 2010-07-23 17:27:29,484 INFO quick_run /home/data/EN480/raw/wh300/en2010_193_70010.raw /home/data/EN480/raw/wh300/en2010_193_72000.raw /home/data/EN480/raw/wh300/en2010_193_79200.raw /home/data/EN480/raw/wh300/en2010_194_00000.raw /home/data/EN480/raw/wh300/en2010_194_07200.raw /home/data/EN480/raw/wh300/en2010_194_14400.raw /home/data/EN480/raw/wh300/en2010_194_21600.raw /home/data/EN480/raw/wh300/en2010_194_28800.raw /home/data/EN480/raw/wh300/en2010_194_36000.raw /home/data/EN480/raw/wh300/en2010_194_43200.raw /home/data/EN480/raw/wh300/en2010_194_50400.raw /home/data/EN480/raw/wh300/en2010_194_57600.raw /home/data/EN480/raw/wh300/en2010_194_64800.raw /home/data/EN480/raw/wh300/en2010_194_72000.raw /home/data/EN480/raw/wh300/en2010_194_79200.raw /home/data/EN480/raw/wh300/en2010_195_00000.raw /home/data/EN480/raw/wh300/en2010_195_07200.raw /home/data/EN480/raw/wh300/en2010_195_14400.raw /home/data/EN480/raw/wh300/en2010_195_21600.raw /home/data/EN480/raw/wh300/en2010_195_28800.raw /home/data/EN480/raw/wh300/en2010_195_36000.raw /home/data/EN480/raw/wh300/en2010_195_43200.raw /home/data/EN480/raw/wh300/en2010_195_50400.raw /home/data/EN480/raw/wh300/en2010_195_57600.raw /home/data/EN480/raw/wh300/en2010_195_64800.raw /home/data/EN480/raw/wh300/en2010_195_72000.raw /home/data/EN480/raw/wh300/en2010_195_79200.raw /home/data/EN480/raw/wh300/en2010_196_00000.raw /home/data/EN480/raw/wh300/en2010_196_07200.raw /home/data/EN480/raw/wh300/en2010_196_14400.raw /home/data/EN480/raw/wh300/en2010_196_21600.raw /home/data/EN480/raw/wh300/en2010_196_28800.raw /home/data/EN480/raw/wh300/en2010_196_36000.raw /home/data/EN480/raw/wh300/en2010_196_43200.raw /home/data/EN480/raw/wh300/en2010_196_50400.raw /home/data/EN480/raw/wh300/en2010_196_57600.raw /home/data/EN480/raw/wh300/en2010_196_64800.raw /home/data/EN480/raw/wh300/en2010_196_72000.raw /home/data/EN480/raw/wh300/en2010_196_79200.raw /home/data/EN480/raw/wh300/en2010_197_00000.raw /home/data/EN480/raw/wh300/en2010_197_07200.raw /home/data/EN480/raw/wh300/en2010_197_14400.raw /home/data/EN480/raw/wh300/en2010_197_21600.raw /home/data/EN480/raw/wh300/en2010_197_28800.raw /home/data/EN480/raw/wh300/en2010_197_36000.raw /home/data/EN480/raw/wh300/en2010_197_43200.raw /home/data/EN480/raw/wh300/en2010_197_50400.raw /home/data/EN480/raw/wh300/en2010_197_57600.raw /home/data/EN480/raw/wh300/en2010_197_64800.raw /home/data/EN480/raw/wh300/en2010_197_72000.raw /home/data/EN480/raw/wh300/en2010_197_79200.raw /home/data/EN480/raw/wh300/en2010_198_00000.raw /home/data/EN480/raw/wh300/en2010_198_07200.raw /home/data/EN480/raw/wh300/en2010_198_14400.raw /home/data/EN480/raw/wh300/en2010_198_21600.raw /home/data/EN480/raw/wh300/en2010_198_28800.raw /home/data/EN480/raw/wh300/en2010_198_36000.raw /home/data/EN480/raw/wh300/en2010_198_43200.raw /home/data/EN480/raw/wh300/en2010_198_50400.raw /home/data/EN480/raw/wh300/en2010_198_57600.raw /home/data/EN480/raw/wh300/en2010_198_64800.raw /home/data/EN480/raw/wh300/en2010_198_72000.raw /home/data/EN480/raw/wh300/en2010_198_79200.raw /home/data/EN480/raw/wh300/en2010_199_00000.raw /home/data/EN480/raw/wh300/en2010_199_07200.raw /home/data/EN480/raw/wh300/en2010_199_14400.raw /home/data/EN480/raw/wh300/en2010_199_21600.raw /home/data/EN480/raw/wh300/en2010_199_28800.raw /home/data/EN480/raw/wh300/en2010_199_36000.raw /home/data/EN480/raw/wh300/en2010_199_43200.raw /home/data/EN480/raw/wh300/en2010_199_50400.raw /home/data/EN480/raw/wh300/en2010_199_57600.raw /home/data/EN480/raw/wh300/en2010_199_64800.raw /home/data/EN480/raw/wh300/en2010_199_72000.raw /home/data/EN480/raw/wh300/en2010_199_79200.raw /home/data/EN480/raw/wh300/en2010_200_00000.raw /home/data/EN480/raw/wh300/en2010_200_07200.raw /home/data/EN480/raw/wh300/en2010_200_14400.raw /home/data/EN480/raw/wh300/en2010_200_21600.raw /home/data/EN480/raw/wh300/en2010_200_28800.raw /home/data/EN480/raw/wh300/en2010_200_36000.raw /home/data/EN480/raw/wh300/en2010_200_43200.raw /home/data/EN480/raw/wh300/en2010_200_50400.raw /home/data/EN480/raw/wh300/en2010_200_57600.raw /home/data/EN480/raw/wh300/en2010_200_64800.raw /home/data/EN480/raw/wh300/en2010_200_72000.raw /home/data/EN480/raw/wh300/en2010_200_79200.raw /home/data/EN480/raw/wh300/en2010_201_00000.raw /home/data/EN480/raw/wh300/en2010_201_07200.raw /home/data/EN480/raw/wh300/en2010_201_14400.raw /home/data/EN480/raw/wh300/en2010_201_21600.raw /home/data/EN480/raw/wh300/en2010_201_28800.raw /home/data/EN480/raw/wh300/en2010_201_36000.raw /home/data/EN480/raw/wh300/en2010_201_43200.raw /home/data/EN480/raw/wh300/en2010_201_50400.raw /home/data/EN480/raw/wh300/en2010_201_57600.raw /home/data/EN480/raw/wh300/en2010_201_64800.raw /home/data/EN480/raw/wh300/en2010_201_72000.raw /home/data/EN480/raw/wh300/en2010_201_79200.raw /home/data/EN480/raw/wh300/en2010_202_00000.raw /home/data/EN480/raw/wh300/en2010_202_07200.raw /home/data/EN480/raw/wh300/en2010_202_14400.raw /home/data/EN480/raw/wh300/en2010_202_21600.raw /home/data/EN480/raw/wh300/en2010_202_28800.raw /home/data/EN480/raw/wh300/en2010_202_36000.raw /home/data/EN480/raw/wh300/en2010_202_43200.raw /home/data/EN480/raw/wh300/en2010_202_50400.raw /home/data/EN480/raw/wh300/en2010_202_57600.raw /home/data/EN480/raw/wh300/en2010_202_64800.raw /home/data/EN480/raw/wh300/en2010_202_72000.raw /home/data/EN480/raw/wh300/en2010_202_79200.raw /home/data/EN480/raw/wh300/en2010_203_00000.raw /home/data/EN480/raw/wh300/en2010_203_07200.raw /home/data/EN480/raw/wh300/en2010_203_14400.raw /home/data/EN480/raw/wh300/en2010_203_21600.raw /home/data/EN480/raw/wh300/en2010_203_28800.raw /home/data/EN480/raw/wh300/en2010_203_36000.raw /home/data/EN480/raw/wh300/en2010_203_43200.raw 2010-07-23 17:27:29,484 DEBUG quick_setup load/ldcodas.tmp exists 2010-07-23 17:27:29,484 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,484 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/load 2010-07-23 17:27:29,484 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,484 DEBUG quick_subs in /home/data/EN480/proc/wh300/load 2010-07-23 17:27:29,485 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047'] 2010-07-23 17:27:29,485 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047', '048'] 2010-07-23 17:27:29,486 DEBUG quick_subs starttime is 2010/07/23 09:00:21 2010-07-23 17:27:29,486 DEBUG quick_subs RESETTING thisload_time_range 2010-07-23 17:27:29,486 DEBUG quick_subs time range of data to be loaded: 2010/07/23 09:00:21 to 2010/07/23 12:43:58 2010-07-23 17:27:29,486 DEBUG quick_subs data startdd 203.375243 data enddd 203.530532 2010-07-23 17:27:29,486 DEBUG quick_subs about to load from these cmd files ['ens_blk048.cmd'] 2010-07-23 17:27:29,486 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_en DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2010 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk048.cmd 2010-07-23 17:27:29,487 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2010-07-23 17:27:29,507 DEBUG quick_subs removing a_endir.blk 2010-07-23 17:27:29,508 DEBUG quick_subs about to run mkblkdir 2010-07-23 17:27:29,508 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-07-23 17:27:29,508 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-07-23 17:27:29,515 DEBUG quick_subs database passes. 2010-07-23 17:27:29,516 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,516 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,516 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,516 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,516 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,517 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,517 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,517 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,517 DEBUG quick_subs writing time range from a_en.lst to a_en.tr 2010-07-23 17:27:29,517 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,517 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,517 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,518 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-07-23 17:27:29,518 DEBUG quick_subs extracting time range 2010-07-23 17:27:29,518 DEBUG quick_subs start_end_time 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,518 DEBUG quick_subs dd0: 193.811725 dd1: 203.529907 2010-07-23 17:27:29,518 DEBUG quick_adcp loaded_time_range is 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,519 DEBUG quick_adcp (193.811725 to 203.529907) 2010-07-23 17:27:29,519 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,519 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/adcpdb 2010-07-23 17:27:29,519 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,519 DEBUG quick_subs dbname: a_en output: a_en.cnh time_ranges: all 2010-07-23 17:27:29,519 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2010-07-23 17:27:29,547 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2010-07-23 17:27:29,548 DEBUG quick_run executing commands from /home/data/EN480/proc/wh300/edit 2010-07-23 17:27:29,548 DEBUG quick_run setup.m exists. not replacing 2010-07-23 17:27:29,548 DEBUG quick_run asetup.m exists. not replacing 2010-07-23 17:27:29,548 DEBUG quick_run aflagit_setup.m exists. not replacing 2010-07-23 17:27:29,548 DEBUG quick_run ------------ step 4: run setflags ------------- 2010-07-23 17:27:29,548 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,548 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/edit 2010-07-23 17:27:29,548 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,548 DEBUG quick_subs dbname: ../adcpdb/a_en pg_min: 50 set_range_bit time_ranges: all 2010-07-23 17:27:29,548 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-07-23 17:27:29,607 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2010-07-23 17:27:29,607 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,607 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:29,607 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,625 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2010-07-23 17:27:29,625 DEBUG quick_run hcorr_inst is ashpaq2 2010-07-23 17:27:29,626 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2010-07-23 17:27:29,626 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,626 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/rotate 2010-07-23 17:27:29,626 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,626 DEBUG quick_subs dbname: ../../adcpdb/a_en output: scn.hdg step_size= 1 year_base= 2010 time_ranges: all 2010-07-23 17:27:29,626 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2010-07-23 17:27:29,667 DEBUG quick_run no available heading correction function specified 2010-07-23 17:27:29,668 DEBUG quick_run ------------ step 7: rotate ------------- 2010-07-23 17:27:29,668 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,668 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/rotate 2010-07-23 17:27:29,668 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,687 DEBUG quick_subs last rotated time from log file: 2010/07/23 12:43:58 2010-07-23 17:27:29,687 DEBUG quick_subs time range of currently loaded data: 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,687 DEBUG quick_subs (193.811725 to 203.529907) 2010-07-23 17:27:29,687 DEBUG quick_subs overriding last rotated time with last time in database, 2010/07/13 19:28:53 to 2010/07/23 12:43:04 2010-07-23 17:27:29,688 DEBUG quick_setup cal/rotate/rotate.tmp exists 2010-07-23 17:27:29,688 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,688 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/rotate 2010-07-23 17:27:29,688 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,688 DEBUG quick_subs DB_NAME: ../../adcpdb/a_en LOG_FILE: rotate.log TIME_RANGE: 2010/07/23 09:00:21 to 2010/07/23 12:43:58 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2010 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2010-07-23 17:27:29,688 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2010-07-23 17:27:29,692 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-07-23 17:27:29,692 DEBUG quick_setup nav/as_nav.tmp exists 2010-07-23 17:27:29,692 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,692 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:29,693 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,693 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/07/13 19:28:53 to 2010/07/23 12:43:04 /* the whole time range */ 2010-07-23 17:27:29,693 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-07-23 17:27:29,795 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-07-23 17:27:29,795 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,795 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:29,795 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,795 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 120 gap_tolerance= 10 2010-07-23 17:27:29,795 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-07-23 17:27:29,868 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-07-23 17:27:29,868 DEBUG quick_setup nav/smoothr.tmp exists 2010-07-23 17:27:29,868 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:29,868 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:29,868 DEBUG quick_setup running python command "method" 2010-07-23 17:27:29,868 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 120 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-07-23 17:27:29,869 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-07-23 17:27:30,307 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:30,307 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:30,307 DEBUG quick_setup running python command "method" 2010-07-23 17:27:30,307 DEBUG call_matlab --> clear all 2010-07-23 17:27:30,314 DEBUG call_matlab <-- >> 2010-07-23 17:27:30,314 DEBUG call_matlab --> close all 2010-07-23 17:27:30,347 DEBUG call_matlab <-- >> 2010-07-23 17:27:30,347 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:30,348 DEBUG call_matlab <-- >> 2010-07-23 17:27:30,349 DEBUG call_matlab --> refsm 2010-07-23 17:27:32,790 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_en opened Searching CODAS database ==> ../adcpdb/a_en for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 6974 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2010-07-23 17:27:32,791 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-07-23 17:27:32,791 DEBUG quick_setup nav/putnav.tmp exists 2010-07-23 17:27:32,791 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:32,791 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:32,791 DEBUG quick_setup running python command "method" 2010-07-23 17:27:32,791 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: refsm.sm year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-07-23 17:27:32,791 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-07-23 17:27:32,919 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2010-07-23 17:27:32,919 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:32,919 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:32,919 DEBUG quick_setup running python command "method" 2010-07-23 17:27:32,920 DEBUG quick_subs Created callrtmp.m 2010-07-23 17:27:32,920 DEBUG call_matlab --> clear all 2010-07-23 17:27:32,924 DEBUG call_matlab <-- >> 2010-07-23 17:27:32,924 DEBUG call_matlab --> close all 2010-07-23 17:27:32,957 DEBUG call_matlab <-- >> 2010-07-23 17:27:32,957 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:32,959 DEBUG call_matlab <-- >> 2010-07-23 17:27:32,959 DEBUG call_matlab --> callrtmp_tmp 2010-07-23 17:27:34,051 DEBUG call_matlab <-- cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 >> 2010-07-23 17:27:34,051 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2010-07-23 17:27:34,051 DEBUG quick_run find profile flags ------------ *** ------------- 2010-07-23 17:27:34,051 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:34,051 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/edit 2010-07-23 17:27:34,051 DEBUG quick_setup running python command "method" 2010-07-23 17:27:34,888 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2010-07-23 17:27:34,888 DEBUG quick_run starting in: /home/data/EN480/proc/wh300 2010-07-23 17:27:34,889 DEBUG quick_run executing commands from: edit 2010-07-23 17:27:34,890 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_en abottom_tmp.asc 2010-07-23 17:27:34,893 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_en abadprf_tmp.asc 2010-07-23 17:27:34,896 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_en abadbin_tmp.asc 2010-07-23 17:27:34,903 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_en 20 2010-07-23 17:27:34,907 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-07-23 17:27:34,964 DEBUG quick_run changing directories back to /home/data/EN480/proc/wh300 2010-07-23 17:27:34,964 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2010-07-23 17:27:34,965 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-07-23 17:27:34,965 DEBUG quick_setup nav/as_nav.tmp exists 2010-07-23 17:27:34,965 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:34,965 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:34,965 DEBUG quick_setup running python command "method" 2010-07-23 17:27:34,965 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/07/13 19:28:53 to 2010/07/23 12:43:04 /* the whole time range */ 2010-07-23 17:27:34,965 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-07-23 17:27:35,066 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-07-23 17:27:35,066 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:35,066 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:35,067 DEBUG quick_setup running python command "method" 2010-07-23 17:27:35,067 DEBUG quick_subs fix_file_type: simple reference_file: a_en.nav fix_file: a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 120 gap_tolerance= 10 2010-07-23 17:27:35,067 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-07-23 17:27:35,139 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-07-23 17:27:35,139 DEBUG quick_setup nav/smoothr.tmp exists 2010-07-23 17:27:35,139 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:35,139 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:35,140 DEBUG quick_setup running python command "method" 2010-07-23 17:27:35,140 DEBUG quick_subs reference_file: a_en.nav refabs_output: a_en.ref output: a_en.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 120 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-07-23 17:27:35,140 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-07-23 17:27:35,575 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:35,575 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:35,576 DEBUG quick_setup running python command "method" 2010-07-23 17:27:35,576 DEBUG call_matlab --> clear all 2010-07-23 17:27:35,584 DEBUG call_matlab <-- >> 2010-07-23 17:27:35,584 DEBUG call_matlab --> close all 2010-07-23 17:27:35,618 DEBUG call_matlab <-- >> 2010-07-23 17:27:35,618 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:35,620 DEBUG call_matlab <-- >> 2010-07-23 17:27:35,620 DEBUG call_matlab --> refsm 2010-07-23 17:27:38,227 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_en opened Searching CODAS database ==> ../adcpdb/a_en for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 6974 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2010-07-23 17:27:38,227 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-07-23 17:27:38,227 DEBUG quick_setup nav/putnav.tmp exists 2010-07-23 17:27:38,227 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:38,227 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:38,227 DEBUG quick_setup running python command "method" 2010-07-23 17:27:38,227 DEBUG quick_subs dbname: ../adcpdb/a_en position_file: refsm.sm year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-07-23 17:27:38,228 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-07-23 17:27:38,346 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2010-07-23 17:27:38,346 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:38,347 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:38,347 DEBUG quick_setup running python command "method" 2010-07-23 17:27:38,347 DEBUG quick_subs Created callrtmp.m 2010-07-23 17:27:38,347 DEBUG call_matlab --> clear all 2010-07-23 17:27:38,352 DEBUG call_matlab <-- >> 2010-07-23 17:27:38,352 DEBUG call_matlab --> close all 2010-07-23 17:27:38,386 DEBUG call_matlab <-- >> 2010-07-23 17:27:38,386 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:38,388 DEBUG call_matlab <-- >> 2010-07-23 17:27:38,388 DEBUG call_matlab --> callrtmp_tmp 2010-07-23 17:27:39,452 DEBUG call_matlab <-- cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 cruise = EN480 >> 2010-07-23 17:27:39,452 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2010-07-23 17:27:39,453 DEBUG quick_setup edit/lst_temp.tmp exists 2010-07-23 17:27:39,453 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:39,453 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/edit 2010-07-23 17:27:39,453 DEBUG quick_setup running python command "method" 2010-07-23 17:27:39,453 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en.tem step_size= 1 year_base= 2010 time_ranges: all 2010-07-23 17:27:39,453 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2010-07-23 17:27:39,502 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:39,503 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/edit 2010-07-23 17:27:39,503 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,037 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2010-07-23 17:27:40,037 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2010-07-23 17:27:40,038 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,038 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/botmtrk 2010-07-23 17:27:40,038 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,038 DEBUG quick_subs dbname: ../../adcpdb/a_en output: a_en.btm step_size= 1 year_base= 2010 time_ranges: 2010/07/13 19:28:53 to 2010/07/23 12:43:04 /* whole time range */ 2010-07-23 17:27:40,038 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2010-07-23 17:27:40,055 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2010-07-23 17:27:40,055 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,055 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/botmtrk 2010-07-23 17:27:40,055 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,056 DEBUG quick_subs fix_file_type: simple reference_file: a_en.btm fix_file: ../../nav/a_en.gps output: a_en.ref year_base= 2010 ensemble_length= 120 gap_tolerance= 60 2010-07-23 17:27:40,056 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2010-07-23 17:27:40,058 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,059 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/botmtrk 2010-07-23 17:27:40,059 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,059 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_en.ref','a_en.btm',... 'ADCP EN480 step size 1 ', 1); 2010-07-23 17:27:40,156 DEBUG quick_setup nav/as_nav.tmp exists 2010-07-23 17:27:40,156 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,156 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/nav 2010-07-23 17:27:40,156 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,156 DEBUG quick_subs dbname: ../adcpdb/a_en output: a_en step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/07/13 19:28:53 to 2010/07/23 12:43:04 /* the whole time range */ 2010-07-23 17:27:40,157 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-07-23 17:27:40,258 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2010-07-23 17:27:40,259 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,259 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/watertrk 2010-07-23 17:27:40,259 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,259 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_en.gps reference_file: ../../nav/a_en.nav output_file: a_en_7.cal year_base= 2010 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2010-07-23 17:27:40,259 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2010-07-23 17:27:40,288 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,288 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/cal/watertrk 2010-07-23 17:27:40,288 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,288 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_en_7.cal', 'ADCP EN480 7ens') 2010-07-23 17:27:40,289 DEBUG call_matlab --> clear all 2010-07-23 17:27:40,292 DEBUG call_matlab <-- >> 2010-07-23 17:27:40,292 DEBUG call_matlab --> close all 2010-07-23 17:27:40,326 DEBUG call_matlab <-- >> 2010-07-23 17:27:40,326 DEBUG call_matlab --> cd /home/data/EN480/proc/wh300/cal/watertrk 2010-07-23 17:27:40,328 DEBUG call_matlab <-- >> 2010-07-23 17:27:40,328 DEBUG call_matlab --> calladcpcal_tmp 2010-07-23 17:27:40,985 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [18x11 double] igood: [14x1 double] >> 2010-07-23 17:27:40,985 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2010-07-23 17:27:40,986 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,986 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/vector 2010-07-23 17:27:40,986 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,986 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-07-23 17:27:40,989 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:40,990 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/vector 2010-07-23 17:27:40,990 DEBUG quick_setup running python command "method" 2010-07-23 17:27:40,990 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2010-07-23 17:27:41,075 DEBUG quick_asect done making vector matfiles 2010-07-23 17:27:41,075 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:41,075 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/contour 2010-07-23 17:27:41,075 DEBUG quick_setup running python command "method" 2010-07-23 17:27:41,076 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_en.tmp 2010-07-23 17:27:41,080 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:41,080 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/contour 2010-07-23 17:27:41,081 DEBUG quick_setup running python command "method" 2010-07-23 17:27:41,081 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2010-07-23 17:27:41,229 DEBUG quick_setup starting in /home/data/EN480/proc/wh300 2010-07-23 17:27:41,229 DEBUG quick_setup executing commands from /home/data/EN480/proc/wh300/contour 2010-07-23 17:27:41,229 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_en 2010-07-23 17:27:41,562 DEBUG quick_asect done running getmat with "allbins" 2010-07-23 17:27:41,562 INFO root copying NOFIG to /home/adcp/www/figures/wh300_hcorr_plot.png 2010-07-23 17:27:41,563 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/wh300_hcorr_plot_thumb.png 2010-07-23 17:27:41,563 DEBUG root matfile is contour/contour_uv.mat 2010-07-23 17:27:41,566 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/wh300_cont_uv.mat 2010-07-23 17:27:41,567 DEBUG root matfile is vector/vector_uv.mat 2010-07-23 17:27:41,567 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/wh300_vect_uv.mat 2010-07-23 17:27:41,567 DEBUG root matfile is contour/contour_xy.mat 2010-07-23 17:27:41,567 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/wh300_cont_xy.mat 2010-07-23 17:27:41,567 DEBUG root matfile is vector/vector_xy.mat 2010-07-23 17:27:41,567 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/wh300_vect_xy.mat 2010-07-23 17:27:41,568 DEBUG root about to copy file edit/a_en.tem to /home/adcp/www/data/wh300_temp.asc 2010-07-23 17:27:41,569 INFO root copying edit/a_en.tem to /home/adcp/www/data/wh300_temp.asc 2010-07-23 17:27:41,569 INFO root Ending quick_adcp.py 2010-07-23 17:27:41,621 DEBUG quick_setup killed matlab engine