2009-06-09 14:48:16,348 DEBUG root about to write control file parameters to --yearbase 2009 --pingtype nb --cfgbase at15_46 --cruisename at15_46 --instclass os --instname os75 --dbname a_at --datatype uhdas --datadir /home/data/at15_46/raw/os75 --cfgpath /home/data/at15_46/proc/os75nb/config --ens_len 300 --ping_headcorr --hcorr_inst phins --use_topo4edit ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 2 --quiet --auto 2009-06-09 14:48:16,351 DEBUG quick_adcp progdir = /home/currents/programs 2009-06-09 14:48:16,351 DEBUG quick_adcp binos = lnx 2009-06-09 14:48:16,352 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2009-06-09 14:48:16,352 DEBUG quick_setup yearbase is 2009, proc_yearbase is 2009 2009-06-09 14:48:16,353 DEBUG quick_setup processing data logged with uhdas: 2009-06-09 14:48:16,353 DEBUG quick_setup datatype is uhdas 2009-06-09 14:48:16,353 DEBUG quick_setup pingtype is nb 2009-06-09 14:48:16,353 DEBUG quick_setup instclass is os 2009-06-09 14:48:16,353 DEBUG quick_setup no post-processing heading correction will be used 2009-06-09 14:48:16,354 DEBUG quick_setup transducer depth set in *_cfg.m file 2009-06-09 14:48:16,354 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'at15_46',... 'cfgpath' , '/home/data/at15_46/proc/os75nb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2009-06-09 14:48:16,354 DEBUG quick_setup ------- starting Matlab engine ------- 2009-06-09 14:48:16,354 DEBUG quick_setup ['/home/currents/programs/matlab'] 2009-06-09 14:48:16,358 DEBUG call_matlab starting to wait for initial prompt 2009-06-09 14:48:17,412 DEBUG call_matlab received initial prompt 2009-06-09 14:48:17,654 DEBUG quick_adcp cwd is /home/data/at15_46/proc/os75nb about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-06-09 14:48:17,655 DEBUG quick_adcp original fix file is a_at.gps 2009-06-09 14:48:17,655 DEBUG quick_adcp smoothed nav file is refsm.sm 2009-06-09 14:48:17,655 DEBUG quick_asect extracting matlab files for os75, nb pings 2009-06-09 14:48:17,899 DEBUG quick_subs found 59 files using wildcard expansion from "/home/data/at15_46/raw/os75/*.raw" 2009-06-09 14:48:17,899 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/at15_46/raw/os75/at2009_154_71291.raw /home/data/at15_46/raw/os75/at2009_154_72000.raw /home/data/at15_46/raw/os75/at2009_154_79200.raw /home/data/at15_46/raw/os75/at2009_155_00000.raw /home/data/at15_46/raw/os75/at2009_155_07200.raw /home/data/at15_46/raw/os75/at2009_155_14400.raw /home/data/at15_46/raw/os75/at2009_155_21600.raw /home/data/at15_46/raw/os75/at2009_155_28800.raw /home/data/at15_46/raw/os75/at2009_155_36000.raw /home/data/at15_46/raw/os75/at2009_155_43200.raw /home/data/at15_46/raw/os75/at2009_155_50400.raw /home/data/at15_46/raw/os75/at2009_155_57600.raw /home/data/at15_46/raw/os75/at2009_155_64800.raw /home/data/at15_46/raw/os75/at2009_155_72000.raw /home/data/at15_46/raw/os75/at2009_155_79200.raw /home/data/at15_46/raw/os75/at2009_156_00000.raw /home/data/at15_46/raw/os75/at2009_156_07200.raw /home/data/at15_46/raw/os75/at2009_156_14400.raw /home/data/at15_46/raw/os75/at2009_156_21600.raw /home/data/at15_46/raw/os75/at2009_156_28800.raw /home/data/at15_46/raw/os75/at2009_156_36000.raw /home/data/at15_46/raw/os75/at2009_156_43200.raw /home/data/at15_46/raw/os75/at2009_156_50400.raw /home/data/at15_46/raw/os75/at2009_156_57600.raw /home/data/at15_46/raw/os75/at2009_156_64800.raw /home/data/at15_46/raw/os75/at2009_156_72000.raw /home/data/at15_46/raw/os75/at2009_156_79200.raw /home/data/at15_46/raw/os75/at2009_157_00000.raw /home/data/at15_46/raw/os75/at2009_157_07200.raw /home/data/at15_46/raw/os75/at2009_157_14400.raw /home/data/at15_46/raw/os75/at2009_157_21600.raw /home/data/at15_46/raw/os75/at2009_157_28800.raw /home/data/at15_46/raw/os75/at2009_157_36000.raw /home/data/at15_46/raw/os75/at2009_157_43200.raw /home/data/at15_46/raw/os75/at2009_157_50400.raw /home/data/at15_46/raw/os75/at2009_157_57600.raw /home/data/at15_46/raw/os75/at2009_157_64800.raw /home/data/at15_46/raw/os75/at2009_157_72000.raw /home/data/at15_46/raw/os75/at2009_157_79200.raw /home/data/at15_46/raw/os75/at2009_158_00000.raw /home/data/at15_46/raw/os75/at2009_158_07200.raw /home/data/at15_46/raw/os75/at2009_158_14400.raw /home/data/at15_46/raw/os75/at2009_158_21600.raw /home/data/at15_46/raw/os75/at2009_158_28800.raw /home/data/at15_46/raw/os75/at2009_158_36000.raw /home/data/at15_46/raw/os75/at2009_158_43200.raw /home/data/at15_46/raw/os75/at2009_158_50400.raw /home/data/at15_46/raw/os75/at2009_158_57600.raw /home/data/at15_46/raw/os75/at2009_158_64800.raw /home/data/at15_46/raw/os75/at2009_158_72000.raw /home/data/at15_46/raw/os75/at2009_158_79200.raw /home/data/at15_46/raw/os75/at2009_159_00000.raw /home/data/at15_46/raw/os75/at2009_159_07200.raw /home/data/at15_46/raw/os75/at2009_159_14400.raw /home/data/at15_46/raw/os75/at2009_159_21600.raw /home/data/at15_46/raw/os75/at2009_159_28800.raw /home/data/at15_46/raw/os75/at2009_159_36000.raw /home/data/at15_46/raw/os75/at2009_159_43200.raw /home/data/at15_46/raw/os75/at2009_159_50400.raw 2009-06-09 14:48:17,899 DEBUG quick_adcp LASTFILES invoked. using only 59 files from end of filelist 2009-06-09 14:48:17,900 DEBUG quick_adcp using delblks = 1 2009-06-09 14:48:17,900 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/at15_46/raw/os75/at2009_154_71291.raw /home/data/at15_46/raw/os75/at2009_154_72000.raw /home/data/at15_46/raw/os75/at2009_154_79200.raw /home/data/at15_46/raw/os75/at2009_155_00000.raw /home/data/at15_46/raw/os75/at2009_155_07200.raw /home/data/at15_46/raw/os75/at2009_155_14400.raw /home/data/at15_46/raw/os75/at2009_155_21600.raw /home/data/at15_46/raw/os75/at2009_155_28800.raw /home/data/at15_46/raw/os75/at2009_155_36000.raw /home/data/at15_46/raw/os75/at2009_155_43200.raw /home/data/at15_46/raw/os75/at2009_155_50400.raw /home/data/at15_46/raw/os75/at2009_155_57600.raw /home/data/at15_46/raw/os75/at2009_155_64800.raw /home/data/at15_46/raw/os75/at2009_155_72000.raw /home/data/at15_46/raw/os75/at2009_155_79200.raw /home/data/at15_46/raw/os75/at2009_156_00000.raw /home/data/at15_46/raw/os75/at2009_156_07200.raw /home/data/at15_46/raw/os75/at2009_156_14400.raw /home/data/at15_46/raw/os75/at2009_156_21600.raw /home/data/at15_46/raw/os75/at2009_156_28800.raw /home/data/at15_46/raw/os75/at2009_156_36000.raw /home/data/at15_46/raw/os75/at2009_156_43200.raw /home/data/at15_46/raw/os75/at2009_156_50400.raw /home/data/at15_46/raw/os75/at2009_156_57600.raw /home/data/at15_46/raw/os75/at2009_156_64800.raw /home/data/at15_46/raw/os75/at2009_156_72000.raw /home/data/at15_46/raw/os75/at2009_156_79200.raw /home/data/at15_46/raw/os75/at2009_157_00000.raw /home/data/at15_46/raw/os75/at2009_157_07200.raw /home/data/at15_46/raw/os75/at2009_157_14400.raw /home/data/at15_46/raw/os75/at2009_157_21600.raw /home/data/at15_46/raw/os75/at2009_157_28800.raw /home/data/at15_46/raw/os75/at2009_157_36000.raw /home/data/at15_46/raw/os75/at2009_157_43200.raw /home/data/at15_46/raw/os75/at2009_157_50400.raw /home/data/at15_46/raw/os75/at2009_157_57600.raw /home/data/at15_46/raw/os75/at2009_157_64800.raw /home/data/at15_46/raw/os75/at2009_157_72000.raw /home/data/at15_46/raw/os75/at2009_157_79200.raw /home/data/at15_46/raw/os75/at2009_158_00000.raw /home/data/at15_46/raw/os75/at2009_158_07200.raw /home/data/at15_46/raw/os75/at2009_158_14400.raw /home/data/at15_46/raw/os75/at2009_158_21600.raw /home/data/at15_46/raw/os75/at2009_158_28800.raw /home/data/at15_46/raw/os75/at2009_158_36000.raw /home/data/at15_46/raw/os75/at2009_158_43200.raw /home/data/at15_46/raw/os75/at2009_158_50400.raw /home/data/at15_46/raw/os75/at2009_158_57600.raw /home/data/at15_46/raw/os75/at2009_158_64800.raw /home/data/at15_46/raw/os75/at2009_158_72000.raw /home/data/at15_46/raw/os75/at2009_158_79200.raw /home/data/at15_46/raw/os75/at2009_159_00000.raw /home/data/at15_46/raw/os75/at2009_159_07200.raw /home/data/at15_46/raw/os75/at2009_159_14400.raw /home/data/at15_46/raw/os75/at2009_159_21600.raw /home/data/at15_46/raw/os75/at2009_159_28800.raw /home/data/at15_46/raw/os75/at2009_159_36000.raw /home/data/at15_46/raw/os75/at2009_159_43200.raw /home/data/at15_46/raw/os75/at2009_159_50400.raw 2009-06-09 14:48:17,902 DEBUG quick_adcp Tue Jun 9 14:48:17 2009 running quick_adcp.py as follows: --cntfile /home/data/at15_46/proc/os75nb/os75nb_qpy.cnt ----- adcpsect variables ------ afilebase a_at cbasename contour dbname a_at dbpath ../adcpdb deeper_boundaries [75, 125, 175, 250, 300, 350, 400, 450, 500, 550, 600, 650, 700, 750, 800, 850] firstdepth 45 gridnum 45 increment 20 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2009 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_at allow_reload True auto True bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase at15_46 cfgpath /home/data/at15_46/proc/os75nb/config cntfile /home/data/at15_46/proc/os75nb/os75nb_qpy.cnt commands None cruisename at15_46 data_def vmadcp.def datadir /home/data/at15_46/raw/os75 datafile_glob *.raw datatype uhdas dbname a_at dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False filelist ['/home/data/at15_46/raw/os75/at2009_154_71291.raw', '/home/data/at15_46/raw/os75/at2009_154_72000.raw', '/home/data/at15_46/raw/os75/at2009_154_79200.raw', '/home/data/at15_46/raw/os75/at2009_155_00000.raw', '/home/data/at15_46/raw/os75/at2009_155_07200.raw', '/home/data/at15_46/raw/os75/at2009_155_14400.raw', '/home/data/at15_46/raw/os75/at2009_155_21600.raw', '/home/data/at15_46/raw/os75/at2009_155_28800.raw', '/home/data/at15_46/raw/os75/at2009_155_36000.raw', '/home/data/at15_46/raw/os75/at2009_155_43200.raw', '/home/data/at15_46/raw/os75/at2009_155_50400.raw', '/home/data/at15_46/raw/os75/at2009_155_57600.raw', '/home/data/at15_46/raw/os75/at2009_155_64800.raw', '/home/data/at15_46/raw/os75/at2009_155_72000.raw', '/home/data/at15_46/raw/os75/at2009_155_79200.raw', '/home/data/at15_46/raw/os75/at2009_156_00000.raw', '/home/data/at15_46/raw/os75/at2009_156_07200.raw', '/home/data/at15_46/raw/os75/at2009_156_14400.raw', '/home/data/at15_46/raw/os75/at2009_156_21600.raw', '/home/data/at15_46/raw/os75/at2009_156_28800.raw', '/home/data/at15_46/raw/os75/at2009_156_36000.raw', '/home/data/at15_46/raw/os75/at2009_156_43200.raw', '/home/data/at15_46/raw/os75/at2009_156_50400.raw', '/home/data/at15_46/raw/os75/at2009_156_57600.raw', '/home/data/at15_46/raw/os75/at2009_156_64800.raw', '/home/data/at15_46/raw/os75/at2009_156_72000.raw', '/home/data/at15_46/raw/os75/at2009_156_79200.raw', '/home/data/at15_46/raw/os75/at2009_157_00000.raw', '/home/data/at15_46/raw/os75/at2009_157_07200.raw', '/home/data/at15_46/raw/os75/at2009_157_14400.raw', '/home/data/at15_46/raw/os75/at2009_157_21600.raw', '/home/data/at15_46/raw/os75/at2009_157_28800.raw', '/home/data/at15_46/raw/os75/at2009_157_36000.raw', '/home/data/at15_46/raw/os75/at2009_157_43200.raw', '/home/data/at15_46/raw/os75/at2009_157_50400.raw', '/home/data/at15_46/raw/os75/at2009_157_57600.raw', '/home/data/at15_46/raw/os75/at2009_157_64800.raw', '/home/data/at15_46/raw/os75/at2009_157_72000.raw', '/home/data/at15_46/raw/os75/at2009_157_79200.raw', '/home/data/at15_46/raw/os75/at2009_158_00000.raw', '/home/data/at15_46/raw/os75/at2009_158_07200.raw', '/home/data/at15_46/raw/os75/at2009_158_14400.raw', '/home/data/at15_46/raw/os75/at2009_158_21600.raw', '/home/data/at15_46/raw/os75/at2009_158_28800.raw', '/home/data/at15_46/raw/os75/at2009_158_36000.raw', '/home/data/at15_46/raw/os75/at2009_158_43200.raw', '/home/data/at15_46/raw/os75/at2009_158_50400.raw', '/home/data/at15_46/raw/os75/at2009_158_57600.raw', '/home/data/at15_46/raw/os75/at2009_158_64800.raw', '/home/data/at15_46/raw/os75/at2009_158_72000.raw', '/home/data/at15_46/raw/os75/at2009_158_79200.raw', '/home/data/at15_46/raw/os75/at2009_159_00000.raw', '/home/data/at15_46/raw/os75/at2009_159_07200.raw', '/home/data/at15_46/raw/os75/at2009_159_14400.raw', '/home/data/at15_46/raw/os75/at2009_159_21600.raw', '/home/data/at15_46/raw/os75/at2009_159_28800.raw', '/home/data/at15_46/raw/os75/at2009_159_36000.raw', '/home/data/at15_46/raw/os75/at2009_159_43200.raw', '/home/data/at15_46/raw/os75/at2009_159_50400.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 45 fixfile a_at.gps hcorr_inst phins head_func None help False hidedisplay True howto_lta False howto_ping False instclass os instname os75 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os75'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'at15_46',... 'cfgpath' , '/home/data/at15_46/proc/os75nb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_at.gps overview False pgmin 50 ping_headcorr True pingtype nb post_headcorr False proc_yearbase 2009 procdir os75nb progdir /home/currents/programs quiet True rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/at15_46/raw/os75/at2009_154_71291.raw', '/home/data/at15_46/raw/os75/at2009_154_72000.raw', '/home/data/at15_46/raw/os75/at2009_154_79200.raw', '/home/data/at15_46/raw/os75/at2009_155_00000.raw', '/home/data/at15_46/raw/os75/at2009_155_07200.raw', '/home/data/at15_46/raw/os75/at2009_155_14400.raw', '/home/data/at15_46/raw/os75/at2009_155_21600.raw', '/home/data/at15_46/raw/os75/at2009_155_28800.raw', '/home/data/at15_46/raw/os75/at2009_155_36000.raw', '/home/data/at15_46/raw/os75/at2009_155_43200.raw', '/home/data/at15_46/raw/os75/at2009_155_50400.raw', '/home/data/at15_46/raw/os75/at2009_155_57600.raw', '/home/data/at15_46/raw/os75/at2009_155_64800.raw', '/home/data/at15_46/raw/os75/at2009_155_72000.raw', '/home/data/at15_46/raw/os75/at2009_155_79200.raw', '/home/data/at15_46/raw/os75/at2009_156_00000.raw', '/home/data/at15_46/raw/os75/at2009_156_07200.raw', '/home/data/at15_46/raw/os75/at2009_156_14400.raw', '/home/data/at15_46/raw/os75/at2009_156_21600.raw', '/home/data/at15_46/raw/os75/at2009_156_28800.raw', '/home/data/at15_46/raw/os75/at2009_156_36000.raw', '/home/data/at15_46/raw/os75/at2009_156_43200.raw', '/home/data/at15_46/raw/os75/at2009_156_50400.raw', '/home/data/at15_46/raw/os75/at2009_156_57600.raw', '/home/data/at15_46/raw/os75/at2009_156_64800.raw', '/home/data/at15_46/raw/os75/at2009_156_72000.raw', '/home/data/at15_46/raw/os75/at2009_156_79200.raw', '/home/data/at15_46/raw/os75/at2009_157_00000.raw', '/home/data/at15_46/raw/os75/at2009_157_07200.raw', '/home/data/at15_46/raw/os75/at2009_157_14400.raw', '/home/data/at15_46/raw/os75/at2009_157_21600.raw', '/home/data/at15_46/raw/os75/at2009_157_28800.raw', '/home/data/at15_46/raw/os75/at2009_157_36000.raw', '/home/data/at15_46/raw/os75/at2009_157_43200.raw', '/home/data/at15_46/raw/os75/at2009_157_50400.raw', '/home/data/at15_46/raw/os75/at2009_157_57600.raw', '/home/data/at15_46/raw/os75/at2009_157_64800.raw', '/home/data/at15_46/raw/os75/at2009_157_72000.raw', '/home/data/at15_46/raw/os75/at2009_157_79200.raw', '/home/data/at15_46/raw/os75/at2009_158_00000.raw', '/home/data/at15_46/raw/os75/at2009_158_07200.raw', '/home/data/at15_46/raw/os75/at2009_158_14400.raw', '/home/data/at15_46/raw/os75/at2009_158_21600.raw', '/home/data/at15_46/raw/os75/at2009_158_28800.raw', '/home/data/at15_46/raw/os75/at2009_158_36000.raw', '/home/data/at15_46/raw/os75/at2009_158_43200.raw', '/home/data/at15_46/raw/os75/at2009_158_50400.raw', '/home/data/at15_46/raw/os75/at2009_158_57600.raw', '/home/data/at15_46/raw/os75/at2009_158_64800.raw', '/home/data/at15_46/raw/os75/at2009_158_72000.raw', '/home/data/at15_46/raw/os75/at2009_158_79200.raw', '/home/data/at15_46/raw/os75/at2009_159_00000.raw', '/home/data/at15_46/raw/os75/at2009_159_07200.raw', '/home/data/at15_46/raw/os75/at2009_159_14400.raw', '/home/data/at15_46/raw/os75/at2009_159_21600.raw', '/home/data/at15_46/raw/os75/at2009_159_28800.raw', '/home/data/at15_46/raw/os75/at2009_159_36000.raw', '/home/data/at15_46/raw/os75/at2009_159_43200.raw', '/home/data/at15_46/raw/os75/at2009_159_50400.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 2 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2009 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-06-09 14:48:17,902 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2009-06-09 14:48:17,902 DEBUG quick_run scanning files for time ranges... 2009-06-09 14:48:17,903 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb/scan 2009-06-09 14:48:17,903 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/scan 2009-06-09 14:48:17,903 DEBUG quick_setup running python command "method" 2009-06-09 14:48:17,903 DEBUG call_matlab --> clear all 2009-06-09 14:48:17,909 DEBUG call_matlab <-- >> 2009-06-09 14:48:17,909 DEBUG call_matlab --> close all 2009-06-09 14:48:17,978 DEBUG call_matlab <-- >> 2009-06-09 14:48:17,978 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/scan 2009-06-09 14:48:17,981 DEBUG call_matlab <-- >> 2009-06-09 14:48:17,981 DEBUG call_matlab --> scan_tmp 2009-06-09 14:48:18,953 DEBUG call_matlab <-- getting config files from "/home/data/at15_46/proc/os75nb/config" running "at15_46_cfg.m" running "at15_46_proc.m" writing scan info to a_at.scn >> 2009-06-09 14:48:18,953 DEBUG quick_run writing time range from a_at.scn to a_at.tr 2009-06-09 14:48:18,953 DEBUG quick_run getting scan time range 2009-06-09 14:48:18,954 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:18,954 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/scan 2009-06-09 14:48:18,954 DEBUG quick_setup running python command "method" 2009-06-09 14:48:18,954 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:18,956 DEBUG quick_subs extracting time range 2009-06-09 14:48:18,957 DEBUG quick_subs start_end_time 2009/06/04 19:48:13 to 2009/06/09 14:47:00 2009-06-09 14:48:18,957 DEBUG quick_subs dd0: 154.825150 dd1: 159.615972 2009-06-09 14:48:18,957 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/at15_46/proc/os75nb 2009-06-09 14:48:18,958 DEBUG quick_adcp looking for database with adcpdb/a_at*.blk 2009-06-09 14:48:18,959 DEBUG quick_adcp database found: listing blocks 2009-06-09 14:48:18,959 DEBUG quick_subs removing a_atdir.blk 2009-06-09 14:48:18,959 DEBUG quick_subs about to run mkblkdir 2009-06-09 14:48:18,960 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-06-09 14:48:18,960 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-06-09 14:48:18,970 DEBUG quick_subs database passes. 2009-06-09 14:48:18,970 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:18,970 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:18,971 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:18,971 DEBUG quick_setup running python command "method" 2009-06-09 14:48:18,971 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:18,972 DEBUG quick_subs extracting time range 2009-06-09 14:48:18,972 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:18,972 DEBUG quick_subs dd0: 154.828669 dd1: 159.594884 2009-06-09 14:48:18,972 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:18,973 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:18,973 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:18,973 DEBUG quick_setup running python command "method" 2009-06-09 14:48:18,973 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:18,974 DEBUG quick_subs extracting time range 2009-06-09 14:48:18,974 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:18,974 DEBUG quick_subs dd0: 154.828669 dd1: 159.594884 2009-06-09 14:48:18,974 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2009-06-09 14:48:18,975 DEBUG quick_adcp origdb_time_range is 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:18,975 DEBUG quick_adcp (154.828669 to 159.594884) 2009-06-09 14:48:18,976 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2009-06-09 14:48:18,976 DEBUG quick_subs getting current (remaining after deletion) database times 2009-06-09 14:48:18,976 DEBUG quick_subs ['adcpdb/a_at007.blk', 'adcpdb/a_at004.blk', 'adcpdb/a_atdir.blk', 'adcpdb/a_at008.blk', 'adcpdb/a_at002.blk', 'adcpdb/a_at001.blk', 'adcpdb/a_at010.blk', 'adcpdb/a_at003.blk', 'adcpdb/a_at005.blk', 'adcpdb/a_at006.blk', 'adcpdb/a_at009.blk'] 2009-06-09 14:48:18,977 DEBUG quick_subs length is 11 2009-06-09 14:48:18,977 DEBUG quick_subs removing a_atdir.blk 2009-06-09 14:48:18,977 DEBUG quick_subs about to run mkblkdir 2009-06-09 14:48:18,977 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-06-09 14:48:18,978 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-06-09 14:48:18,987 DEBUG quick_subs database passes. 2009-06-09 14:48:18,987 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:18,988 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:18,988 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:18,988 DEBUG quick_setup running python command "method" 2009-06-09 14:48:18,988 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:18,989 DEBUG quick_subs extracting time range 2009-06-09 14:48:18,989 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:18,989 DEBUG quick_subs dd0: 154.828669 dd1: 159.594884 2009-06-09 14:48:18,990 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:18,990 DEBUG quick_subs reading time range 2009-06-09 14:48:18,990 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:18,990 DEBUG quick_subs dd0: 154.828669 dd1: 159.594884 2009-06-09 14:48:18,991 INFO quick_subs Tue Jun 9 14:48:18 2009 2009-06-09 14:48:18,991 INFO quick_subs checking database time range by listblk 2009-06-09 14:48:18,991 DEBUG quick_subs removing a_atdir.blk 2009-06-09 14:48:18,992 DEBUG quick_subs about to run mkblkdir 2009-06-09 14:48:18,992 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-06-09 14:48:18,992 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-06-09 14:48:19,002 DEBUG quick_subs database passes. 2009-06-09 14:48:19,002 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:19,003 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,003 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,003 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,004 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:19,004 DEBUG quick_subs extracting time range 2009-06-09 14:48:19,005 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:16:38 2009-06-09 14:48:19,005 DEBUG quick_subs dd0: 154.828669 dd1: 159.594884 2009-06-09 14:48:19,007 INFO quick_subs found line /* 0 n= 146 a_at001.blk */ 2009/06/04 19:53:17 to 2009/06/05 08:02:35 2009-06-09 14:48:19,007 INFO quick_subs found line /* 1 n= 146 a_at002.blk */ 2009/06/05 08:07:36 to 2009/06/05 20:21:26 2009-06-09 14:48:19,007 INFO quick_subs found line /* 2 n= 146 a_at003.blk */ 2009/06/05 20:26:28 to 2009/06/06 08:35:40 2009-06-09 14:48:19,008 INFO quick_subs found line /* 3 n= 146 a_at004.blk */ 2009/06/06 08:40:42 to 2009/06/06 20:49:29 2009-06-09 14:48:19,008 INFO quick_subs found line /* 4 n= 146 a_at005.blk */ 2009/06/06 20:54:31 to 2009/06/07 09:08:39 2009-06-09 14:48:19,008 INFO quick_subs found line /* 5 n= 146 a_at006.blk */ 2009/06/07 09:13:41 to 2009/06/07 21:22:50 2009-06-09 14:48:19,008 INFO quick_subs found line /* 6 n= 146 a_at007.blk */ 2009/06/07 21:27:52 to 2009/06/08 09:37:09 2009-06-09 14:48:19,009 INFO quick_subs found line /* 7 n= 146 a_at008.blk */ 2009/06/08 09:42:11 to 2009/06/08 21:51:16 2009-06-09 14:48:19,009 INFO quick_subs found line /* 8 n= 146 a_at009.blk */ 2009/06/08 21:56:18 to 2009/06/09 10:05:23 2009-06-09 14:48:19,009 INFO quick_subs found line /* 9 n= 50 a_at010.blk */ 2009/06/09 10:10:24 to 2009/06/09 14:16:38 2009-06-09 14:48:19,009 INFO quick_subs scan data start at 154.8251505 2009-06-09 14:48:19,010 INFO quick_subs scan time range: 2009/06/04 19:48:13 to 2009/06/09 14:47:00 2009-06-09 14:48:19,010 INFO quick_subs codasdb ends at 159.5948843 (2009/06/09 14:16:38) 2009-06-09 14:48:19,010 DEBUG quick_subs ... changed dirs, in /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,011 DEBUG quick_subs deleting these files: ['a_at010.blk'] 2009-06-09 14:48:19,011 DEBUG quick_subs getting current (remaining after deletion) database times 2009-06-09 14:48:19,012 DEBUG quick_subs ['adcpdb/a_at007.blk', 'adcpdb/a_at004.blk', 'adcpdb/a_at008.blk', 'adcpdb/a_at002.blk', 'adcpdb/a_at001.blk', 'adcpdb/a_at003.blk', 'adcpdb/a_at005.blk', 'adcpdb/a_at006.blk', 'adcpdb/a_at009.blk'] 2009-06-09 14:48:19,012 DEBUG quick_subs length is 9 2009-06-09 14:48:19,012 DEBUG quick_subs about to run mkblkdir 2009-06-09 14:48:19,012 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-06-09 14:48:19,013 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-06-09 14:48:19,022 DEBUG quick_subs database passes. 2009-06-09 14:48:19,023 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:19,023 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,023 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,024 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,024 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:19,024 DEBUG quick_subs extracting time range 2009-06-09 14:48:19,025 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 10:05:23 2009-06-09 14:48:19,025 DEBUG quick_subs dd0: 154.828669 dd1: 159.420405 2009-06-09 14:48:19,025 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:19,025 DEBUG quick_subs reading time range 2009-06-09 14:48:19,026 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 10:05:23 2009-06-09 14:48:19,026 DEBUG quick_subs dd0: 154.828669 dd1: 159.420405 2009-06-09 14:48:19,026 DEBUG quick_subs codas database currently goes from 2009/06/04 19:53:17 to 2009/06/09 10:05:23 2009-06-09 14:48:19,026 DEBUG quick_subs (154.828669 to 159.420405) 2009-06-09 14:48:19,027 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009 2009-06-09 14:48:19,029 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 2009-06-09 14:48:19,029 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009'] 2009-06-09 14:48:19,029 DEBUG quick_subs checked: unloaded blkstrs: ['010'] 2009-06-09 14:48:19,029 DEBUG quick_subs first unloaded file is load/ens_blk010.cmd 2009-06-09 14:48:19,030 DEBUG quick_subs data goes from 2009/06/09 10:10:24 to 2009/06/09 14:47:00 2009-06-09 14:48:19,030 DEBUG quick_subs (159.423889 to 159.615972) 2009-06-09 14:48:19,030 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/at15_46/raw/os75/at2009_154_71291.raw /home/data/at15_46/raw/os75/at2009_154_72000.raw /home/data/at15_46/raw/os75/at2009_154_79200.raw /home/data/at15_46/raw/os75/at2009_155_00000.raw /home/data/at15_46/raw/os75/at2009_155_07200.raw /home/data/at15_46/raw/os75/at2009_155_14400.raw /home/data/at15_46/raw/os75/at2009_155_21600.raw /home/data/at15_46/raw/os75/at2009_155_28800.raw /home/data/at15_46/raw/os75/at2009_155_36000.raw /home/data/at15_46/raw/os75/at2009_155_43200.raw /home/data/at15_46/raw/os75/at2009_155_50400.raw /home/data/at15_46/raw/os75/at2009_155_57600.raw /home/data/at15_46/raw/os75/at2009_155_64800.raw /home/data/at15_46/raw/os75/at2009_155_72000.raw /home/data/at15_46/raw/os75/at2009_155_79200.raw /home/data/at15_46/raw/os75/at2009_156_00000.raw /home/data/at15_46/raw/os75/at2009_156_07200.raw /home/data/at15_46/raw/os75/at2009_156_14400.raw /home/data/at15_46/raw/os75/at2009_156_21600.raw /home/data/at15_46/raw/os75/at2009_156_28800.raw /home/data/at15_46/raw/os75/at2009_156_36000.raw /home/data/at15_46/raw/os75/at2009_156_43200.raw /home/data/at15_46/raw/os75/at2009_156_50400.raw /home/data/at15_46/raw/os75/at2009_156_57600.raw /home/data/at15_46/raw/os75/at2009_156_64800.raw /home/data/at15_46/raw/os75/at2009_156_72000.raw /home/data/at15_46/raw/os75/at2009_156_79200.raw /home/data/at15_46/raw/os75/at2009_157_00000.raw /home/data/at15_46/raw/os75/at2009_157_07200.raw /home/data/at15_46/raw/os75/at2009_157_14400.raw /home/data/at15_46/raw/os75/at2009_157_21600.raw /home/data/at15_46/raw/os75/at2009_157_28800.raw /home/data/at15_46/raw/os75/at2009_157_36000.raw /home/data/at15_46/raw/os75/at2009_157_43200.raw /home/data/at15_46/raw/os75/at2009_157_50400.raw /home/data/at15_46/raw/os75/at2009_157_57600.raw /home/data/at15_46/raw/os75/at2009_157_64800.raw /home/data/at15_46/raw/os75/at2009_157_72000.raw /home/data/at15_46/raw/os75/at2009_157_79200.raw /home/data/at15_46/raw/os75/at2009_158_00000.raw /home/data/at15_46/raw/os75/at2009_158_07200.raw /home/data/at15_46/raw/os75/at2009_158_14400.raw /home/data/at15_46/raw/os75/at2009_158_21600.raw /home/data/at15_46/raw/os75/at2009_158_28800.raw /home/data/at15_46/raw/os75/at2009_158_36000.raw /home/data/at15_46/raw/os75/at2009_158_43200.raw /home/data/at15_46/raw/os75/at2009_158_50400.raw /home/data/at15_46/raw/os75/at2009_158_57600.raw /home/data/at15_46/raw/os75/at2009_158_64800.raw /home/data/at15_46/raw/os75/at2009_158_72000.raw /home/data/at15_46/raw/os75/at2009_158_79200.raw /home/data/at15_46/raw/os75/at2009_159_00000.raw /home/data/at15_46/raw/os75/at2009_159_07200.raw /home/data/at15_46/raw/os75/at2009_159_14400.raw /home/data/at15_46/raw/os75/at2009_159_21600.raw /home/data/at15_46/raw/os75/at2009_159_28800.raw /home/data/at15_46/raw/os75/at2009_159_36000.raw /home/data/at15_46/raw/os75/at2009_159_43200.raw /home/data/at15_46/raw/os75/at2009_159_50400.raw 2009-06-09 14:48:19,031 INFO quick_run Tue Jun 9 14:48:19 2009 2009-06-09 14:48:19,031 INFO quick_run about to load uhdas files 2009-06-09 14:48:19,031 INFO quick_run /home/data/at15_46/raw/os75/at2009_154_71291.raw /home/data/at15_46/raw/os75/at2009_154_72000.raw /home/data/at15_46/raw/os75/at2009_154_79200.raw /home/data/at15_46/raw/os75/at2009_155_00000.raw /home/data/at15_46/raw/os75/at2009_155_07200.raw /home/data/at15_46/raw/os75/at2009_155_14400.raw /home/data/at15_46/raw/os75/at2009_155_21600.raw /home/data/at15_46/raw/os75/at2009_155_28800.raw /home/data/at15_46/raw/os75/at2009_155_36000.raw /home/data/at15_46/raw/os75/at2009_155_43200.raw /home/data/at15_46/raw/os75/at2009_155_50400.raw /home/data/at15_46/raw/os75/at2009_155_57600.raw /home/data/at15_46/raw/os75/at2009_155_64800.raw /home/data/at15_46/raw/os75/at2009_155_72000.raw /home/data/at15_46/raw/os75/at2009_155_79200.raw /home/data/at15_46/raw/os75/at2009_156_00000.raw /home/data/at15_46/raw/os75/at2009_156_07200.raw /home/data/at15_46/raw/os75/at2009_156_14400.raw /home/data/at15_46/raw/os75/at2009_156_21600.raw /home/data/at15_46/raw/os75/at2009_156_28800.raw /home/data/at15_46/raw/os75/at2009_156_36000.raw /home/data/at15_46/raw/os75/at2009_156_43200.raw /home/data/at15_46/raw/os75/at2009_156_50400.raw /home/data/at15_46/raw/os75/at2009_156_57600.raw /home/data/at15_46/raw/os75/at2009_156_64800.raw /home/data/at15_46/raw/os75/at2009_156_72000.raw /home/data/at15_46/raw/os75/at2009_156_79200.raw /home/data/at15_46/raw/os75/at2009_157_00000.raw /home/data/at15_46/raw/os75/at2009_157_07200.raw /home/data/at15_46/raw/os75/at2009_157_14400.raw /home/data/at15_46/raw/os75/at2009_157_21600.raw /home/data/at15_46/raw/os75/at2009_157_28800.raw /home/data/at15_46/raw/os75/at2009_157_36000.raw /home/data/at15_46/raw/os75/at2009_157_43200.raw /home/data/at15_46/raw/os75/at2009_157_50400.raw /home/data/at15_46/raw/os75/at2009_157_57600.raw /home/data/at15_46/raw/os75/at2009_157_64800.raw /home/data/at15_46/raw/os75/at2009_157_72000.raw /home/data/at15_46/raw/os75/at2009_157_79200.raw /home/data/at15_46/raw/os75/at2009_158_00000.raw /home/data/at15_46/raw/os75/at2009_158_07200.raw /home/data/at15_46/raw/os75/at2009_158_14400.raw /home/data/at15_46/raw/os75/at2009_158_21600.raw /home/data/at15_46/raw/os75/at2009_158_28800.raw /home/data/at15_46/raw/os75/at2009_158_36000.raw /home/data/at15_46/raw/os75/at2009_158_43200.raw /home/data/at15_46/raw/os75/at2009_158_50400.raw /home/data/at15_46/raw/os75/at2009_158_57600.raw /home/data/at15_46/raw/os75/at2009_158_64800.raw /home/data/at15_46/raw/os75/at2009_158_72000.raw /home/data/at15_46/raw/os75/at2009_158_79200.raw /home/data/at15_46/raw/os75/at2009_159_00000.raw /home/data/at15_46/raw/os75/at2009_159_07200.raw /home/data/at15_46/raw/os75/at2009_159_14400.raw /home/data/at15_46/raw/os75/at2009_159_21600.raw /home/data/at15_46/raw/os75/at2009_159_28800.raw /home/data/at15_46/raw/os75/at2009_159_36000.raw /home/data/at15_46/raw/os75/at2009_159_43200.raw /home/data/at15_46/raw/os75/at2009_159_50400.raw 2009-06-09 14:48:19,031 DEBUG quick_setup load/ldcodas.tmp exists 2009-06-09 14:48:19,031 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,032 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/load 2009-06-09 14:48:19,032 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,032 DEBUG quick_subs in /home/data/at15_46/proc/os75nb/load 2009-06-09 14:48:19,033 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009'] 2009-06-09 14:48:19,033 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010'] 2009-06-09 14:48:19,034 DEBUG quick_subs starttime is 2009/06/09 10:10:24 2009-06-09 14:48:19,034 DEBUG quick_subs RESETTING thisload_time_range 2009-06-09 14:48:19,035 DEBUG quick_subs time range of data to be loaded: 2009/06/09 10:10:24 to 2009/06/09 14:47:00 2009-06-09 14:48:19,035 DEBUG quick_subs data startdd 159.423889 data enddd 159.615972 2009-06-09 14:48:19,035 DEBUG quick_subs about to load from these cmd files ['ens_blk010.cmd'] 2009-06-09 14:48:19,035 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_at DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2009 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk010.cmd 2009-06-09 14:48:19,035 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2009-06-09 14:48:19,054 DEBUG quick_subs removing a_atdir.blk 2009-06-09 14:48:19,055 DEBUG quick_subs about to run mkblkdir 2009-06-09 14:48:19,055 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-06-09 14:48:19,056 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-06-09 14:48:19,065 DEBUG quick_subs database passes. 2009-06-09 14:48:19,065 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:19,066 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,066 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,066 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,066 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:19,067 DEBUG quick_subs extracting time range 2009-06-09 14:48:19,067 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:46:44 2009-06-09 14:48:19,067 DEBUG quick_subs dd0: 154.828669 dd1: 159.615787 2009-06-09 14:48:19,068 DEBUG quick_subs writing time range from a_at.lst to a_at.tr 2009-06-09 14:48:19,068 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,068 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,068 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,069 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-06-09 14:48:19,069 DEBUG quick_subs extracting time range 2009-06-09 14:48:19,069 DEBUG quick_subs start_end_time 2009/06/04 19:53:17 to 2009/06/09 14:46:44 2009-06-09 14:48:19,070 DEBUG quick_subs dd0: 154.828669 dd1: 159.615787 2009-06-09 14:48:19,070 DEBUG quick_adcp loaded_time_range is 2009/06/04 19:53:17 to 2009/06/09 14:46:44 2009-06-09 14:48:19,070 DEBUG quick_adcp (154.828669 to 159.615787) 2009-06-09 14:48:19,070 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,071 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/adcpdb 2009-06-09 14:48:19,071 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,071 DEBUG quick_subs dbname: a_at output: a_at.cnh time_ranges: all 2009-06-09 14:48:19,071 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2009-06-09 14:48:19,085 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2009-06-09 14:48:19,085 DEBUG quick_run executing commands from /home/data/at15_46/proc/os75nb/edit 2009-06-09 14:48:19,085 DEBUG quick_run setup.m exists. not replacing 2009-06-09 14:48:19,085 DEBUG quick_run asetup.m exists. not replacing 2009-06-09 14:48:19,086 DEBUG quick_run aflagit_setup.m exists. not replacing 2009-06-09 14:48:19,086 DEBUG quick_run ------------ step 4: run setflags ------------- 2009-06-09 14:48:19,086 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,086 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/edit 2009-06-09 14:48:19,087 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,087 DEBUG quick_subs dbname: ../adcpdb/a_at pg_min: 50 set_range_bit time_ranges: all 2009-06-09 14:48:19,087 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-06-09 14:48:19,113 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2009-06-09 14:48:19,113 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,113 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,114 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,116 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2009-06-09 14:48:19,116 DEBUG quick_run hcorr_inst is phins 2009-06-09 14:48:19,117 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2009-06-09 14:48:19,117 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,117 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/rotate 2009-06-09 14:48:19,117 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,117 DEBUG quick_subs dbname: ../../adcpdb/a_at output: scn.hdg step_size= 1 year_base= 2009 time_ranges: all 2009-06-09 14:48:19,118 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2009-06-09 14:48:19,136 DEBUG quick_run no available heading correction function specified 2009-06-09 14:48:19,137 DEBUG quick_run ------------ step 7: rotate ------------- 2009-06-09 14:48:19,137 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,137 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/rotate 2009-06-09 14:48:19,137 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,158 DEBUG quick_subs last rotated time from log file: 2009/06/09 14:16:52 2009-06-09 14:48:19,159 DEBUG quick_subs time range of currently loaded data: 2009/06/04 19:53:17 to 2009/06/09 14:46:44 2009-06-09 14:48:19,159 DEBUG quick_subs (154.828669 to 159.615787) 2009-06-09 14:48:19,160 DEBUG quick_setup cal/rotate/rotate.tmp exists 2009-06-09 14:48:19,160 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,160 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/rotate 2009-06-09 14:48:19,160 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,161 DEBUG quick_subs DB_NAME: ../../adcpdb/a_at LOG_FILE: rotate.log TIME_RANGE: 2009/06/09 10:10:24 to 2009/06/09 14:47:00 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2009 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2009-06-09 14:48:19,161 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2009-06-09 14:48:19,167 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-06-09 14:48:19,167 DEBUG quick_setup nav/as_nav.tmp exists 2009-06-09 14:48:19,168 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,168 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,168 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,168 DEBUG quick_subs dbname: ../adcpdb/a_at output: a_at step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/06/04 19:53:17 to 2009/06/09 14:46:44 /* the whole time range */ 2009-06-09 14:48:19,169 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-06-09 14:48:19,210 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-06-09 14:48:19,211 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,211 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,212 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,212 DEBUG quick_subs fix_file_type: simple reference_file: a_at.nav fix_file: a_at.gps output: a_at.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-06-09 14:48:19,212 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-06-09 14:48:19,246 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-06-09 14:48:19,246 DEBUG quick_setup nav/smoothr.tmp exists 2009-06-09 14:48:19,246 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,247 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,247 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,247 DEBUG quick_subs reference_file: a_at.nav refabs_output: a_at.ref output: a_at.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-06-09 14:48:19,247 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-06-09 14:48:19,402 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:19,402 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,402 DEBUG quick_setup running python command "method" 2009-06-09 14:48:19,403 DEBUG call_matlab --> clear all 2009-06-09 14:48:19,415 DEBUG call_matlab <-- >> 2009-06-09 14:48:19,415 DEBUG call_matlab --> close all 2009-06-09 14:48:19,482 DEBUG call_matlab <-- >> 2009-06-09 14:48:19,483 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:19,486 DEBUG call_matlab <-- >> 2009-06-09 14:48:19,486 DEBUG call_matlab --> refsm 2009-06-09 14:48:20,585 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_at opened Searching CODAS database ==> ../adcpdb/a_at for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 1370 profiles, 20 bins INFO: database closed loading getmat output >> 2009-06-09 14:48:20,586 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-06-09 14:48:20,586 DEBUG quick_setup nav/putnav.tmp exists 2009-06-09 14:48:20,586 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:20,587 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:20,587 DEBUG quick_setup running python command "method" 2009-06-09 14:48:20,587 DEBUG quick_subs dbname: ../adcpdb/a_at position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-06-09 14:48:20,587 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-06-09 14:48:20,639 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-06-09 14:48:20,639 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:20,639 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:20,640 DEBUG quick_setup running python command "method" 2009-06-09 14:48:20,641 DEBUG quick_subs Created callrtmp.m 2009-06-09 14:48:20,642 DEBUG call_matlab --> clear all 2009-06-09 14:48:20,648 DEBUG call_matlab <-- >> 2009-06-09 14:48:20,648 DEBUG call_matlab --> close all 2009-06-09 14:48:20,714 DEBUG call_matlab <-- >> 2009-06-09 14:48:20,714 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:20,717 DEBUG call_matlab <-- >> 2009-06-09 14:48:20,717 DEBUG call_matlab --> callrtmp_tmp 2009-06-09 14:48:22,292 DEBUG call_matlab <-- cruise = at15_46 cruise = at15_46 cruise = at15_46 No data available. >> 2009-06-09 14:48:22,292 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2009-06-09 14:48:22,292 DEBUG quick_run find profile flags ------------ *** ------------- 2009-06-09 14:48:22,292 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:22,293 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/edit 2009-06-09 14:48:22,293 DEBUG quick_setup running python command "method" 2009-06-09 14:48:23,839 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2009-06-09 14:48:23,839 DEBUG quick_run starting in: /home/data/at15_46/proc/os75nb 2009-06-09 14:48:23,839 DEBUG quick_run executing commands from: edit 2009-06-09 14:48:23,843 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_at abottom_tmp.asc 2009-06-09 14:48:23,849 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_at abadprf_tmp.asc 2009-06-09 14:48:23,854 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_at abadbin_tmp.asc 2009-06-09 14:48:23,861 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_at 2009-06-09 14:48:23,867 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-06-09 14:48:23,892 DEBUG quick_run changing directories back to /home/data/at15_46/proc/os75nb 2009-06-09 14:48:23,893 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2009-06-09 14:48:23,893 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-06-09 14:48:23,894 DEBUG quick_setup nav/as_nav.tmp exists 2009-06-09 14:48:23,894 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:23,894 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:23,894 DEBUG quick_setup running python command "method" 2009-06-09 14:48:23,894 DEBUG quick_subs dbname: ../adcpdb/a_at output: a_at step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/06/04 19:53:17 to 2009/06/09 14:46:44 /* the whole time range */ 2009-06-09 14:48:23,895 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-06-09 14:48:23,937 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-06-09 14:48:23,937 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:23,937 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:23,938 DEBUG quick_setup running python command "method" 2009-06-09 14:48:23,938 DEBUG quick_subs fix_file_type: simple reference_file: a_at.nav fix_file: a_at.gps output: a_at.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-06-09 14:48:23,938 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-06-09 14:48:23,971 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-06-09 14:48:23,971 DEBUG quick_setup nav/smoothr.tmp exists 2009-06-09 14:48:23,972 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:23,972 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:23,972 DEBUG quick_setup running python command "method" 2009-06-09 14:48:23,972 DEBUG quick_subs reference_file: a_at.nav refabs_output: a_at.ref output: a_at.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-06-09 14:48:23,973 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-06-09 14:48:24,122 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:24,123 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:24,123 DEBUG quick_setup running python command "method" 2009-06-09 14:48:24,123 DEBUG call_matlab --> clear all 2009-06-09 14:48:24,137 DEBUG call_matlab <-- >> 2009-06-09 14:48:24,137 DEBUG call_matlab --> close all 2009-06-09 14:48:24,204 DEBUG call_matlab <-- >> 2009-06-09 14:48:24,205 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:24,207 DEBUG call_matlab <-- >> 2009-06-09 14:48:24,208 DEBUG call_matlab --> refsm 2009-06-09 14:48:25,162 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_at opened Searching CODAS database ==> ../adcpdb/a_at for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 1370 profiles, 20 bins INFO: database closed loading getmat output >> 2009-06-09 14:48:25,163 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-06-09 14:48:25,163 DEBUG quick_setup nav/putnav.tmp exists 2009-06-09 14:48:25,163 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:25,163 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:25,163 DEBUG quick_setup running python command "method" 2009-06-09 14:48:25,164 DEBUG quick_subs dbname: ../adcpdb/a_at position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-06-09 14:48:25,164 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-06-09 14:48:25,249 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-06-09 14:48:25,250 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:25,250 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:25,250 DEBUG quick_setup running python command "method" 2009-06-09 14:48:25,252 DEBUG quick_subs Created callrtmp.m 2009-06-09 14:48:25,252 DEBUG call_matlab --> clear all 2009-06-09 14:48:25,265 DEBUG call_matlab <-- >> 2009-06-09 14:48:25,265 DEBUG call_matlab --> close all 2009-06-09 14:48:25,384 DEBUG call_matlab <-- >> 2009-06-09 14:48:25,384 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:25,387 DEBUG call_matlab <-- >> 2009-06-09 14:48:25,388 DEBUG call_matlab --> callrtmp_tmp 2009-06-09 14:48:27,084 DEBUG call_matlab <-- cruise = at15_46 cruise = at15_46 cruise = at15_46 No data available. >> 2009-06-09 14:48:27,084 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2009-06-09 14:48:27,085 DEBUG quick_setup edit/lst_temp.tmp exists 2009-06-09 14:48:27,085 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:27,085 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/edit 2009-06-09 14:48:27,085 DEBUG quick_setup running python command "method" 2009-06-09 14:48:27,085 DEBUG quick_subs dbname: ../adcpdb/a_at output: a_at.tem step_size= 1 year_base= 2009 time_ranges: all 2009-06-09 14:48:27,086 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2009-06-09 14:48:27,110 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:27,110 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/edit 2009-06-09 14:48:27,110 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,164 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2009-06-09 14:48:28,164 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2009-06-09 14:48:28,164 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,164 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/botmtrk 2009-06-09 14:48:28,165 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,165 DEBUG quick_subs dbname: ../../adcpdb/a_at output: a_at.btm step_size= 1 year_base= 2009 time_ranges: 2009/06/04 19:53:17 to 2009/06/09 14:46:44 /* whole time range */ 2009-06-09 14:48:28,165 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2009-06-09 14:48:28,175 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2009-06-09 14:48:28,175 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,176 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/botmtrk 2009-06-09 14:48:28,176 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,176 DEBUG quick_subs fix_file_type: simple reference_file: a_at.btm fix_file: ../../nav/a_at.gps output: a_at.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 60 2009-06-09 14:48:28,176 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2009-06-09 14:48:28,182 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,183 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/botmtrk 2009-06-09 14:48:28,183 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,183 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_at.ref','a_at.btm',... 'ADCP at15_46 step size 1 ', 1); 2009-06-09 14:48:28,379 DEBUG quick_setup nav/as_nav.tmp exists 2009-06-09 14:48:28,380 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,380 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/nav 2009-06-09 14:48:28,381 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,381 DEBUG quick_subs dbname: ../adcpdb/a_at output: a_at step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/06/04 19:53:17 to 2009/06/09 14:46:44 /* the whole time range */ 2009-06-09 14:48:28,382 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-06-09 14:48:28,425 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2009-06-09 14:48:28,425 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,425 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/watertrk 2009-06-09 14:48:28,426 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,426 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_at.gps reference_file: ../../nav/a_at.nav output_file: a_at_7.cal year_base= 2009 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2009-06-09 14:48:28,426 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2009-06-09 14:48:28,439 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:28,440 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/cal/watertrk 2009-06-09 14:48:28,440 DEBUG quick_setup running python command "method" 2009-06-09 14:48:28,440 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_at_7.cal', 'ADCP at15_46 7ens') 2009-06-09 14:48:28,441 DEBUG call_matlab --> clear all 2009-06-09 14:48:28,447 DEBUG call_matlab <-- >> 2009-06-09 14:48:28,447 DEBUG call_matlab --> close all 2009-06-09 14:48:28,518 DEBUG call_matlab <-- >> 2009-06-09 14:48:28,518 DEBUG call_matlab --> cd /home/data/at15_46/proc/os75nb/cal/watertrk 2009-06-09 14:48:28,521 DEBUG call_matlab <-- >> 2009-06-09 14:48:28,521 DEBUG call_matlab --> calladcpcal_tmp 2009-06-09 14:48:29,975 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [2x11 double] igood: [2x1 double] >> 2009-06-09 14:48:29,976 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2009-06-09 14:48:29,976 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:29,976 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/vector 2009-06-09 14:48:29,976 DEBUG quick_setup running python command "method" 2009-06-09 14:48:29,977 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_at.tmp 2009-06-09 14:48:29,983 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:29,984 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/vector 2009-06-09 14:48:29,984 DEBUG quick_setup running python command "method" 2009-06-09 14:48:29,984 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2009-06-09 14:48:30,035 DEBUG quick_asect done making vector matfiles 2009-06-09 14:48:30,035 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:30,036 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/contour 2009-06-09 14:48:30,036 DEBUG quick_setup running python command "method" 2009-06-09 14:48:30,036 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_at.tmp 2009-06-09 14:48:30,044 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:30,044 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/contour 2009-06-09 14:48:30,044 DEBUG quick_setup running python command "method" 2009-06-09 14:48:30,045 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2009-06-09 14:48:30,165 DEBUG quick_setup starting in /home/data/at15_46/proc/os75nb 2009-06-09 14:48:30,166 DEBUG quick_setup executing commands from /home/data/at15_46/proc/os75nb/contour 2009-06-09 14:48:30,166 DEBUG quick_setup about to run getmat -rs -f allbins_ ../adcpdb/a_at 2009-06-09 14:48:30,426 DEBUG quick_asect done running getmat with "allbins" 2009-06-09 14:48:30,427 INFO root copying NOFIG to /home/adcp/www/figures/os75nb_hcorr_plot.png 2009-06-09 14:48:30,427 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/os75nb_hcorr_plot_thumb.png 2009-06-09 14:48:30,427 DEBUG root matfile is contour/contour_uv.mat 2009-06-09 14:48:30,429 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/os75nb_cont_uv.mat 2009-06-09 14:48:30,430 DEBUG root matfile is vector/vector_uv.mat 2009-06-09 14:48:30,430 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/os75nb_vect_uv.mat 2009-06-09 14:48:30,431 DEBUG root matfile is contour/contour_xy.mat 2009-06-09 14:48:30,431 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/os75nb_cont_xy.mat 2009-06-09 14:48:30,431 DEBUG root matfile is vector/vector_xy.mat 2009-06-09 14:48:30,432 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/os75nb_vect_xy.mat 2009-06-09 14:48:30,432 DEBUG root about to copy file edit/a_at.tem to /home/adcp/www/data/os75nb_temp.asc 2009-06-09 14:48:30,433 INFO root copying edit/a_at.tem to /home/adcp/www/data/os75nb_temp.asc 2009-06-09 14:48:30,433 INFO root Ending quick_adcp.py 2009-06-09 14:48:30,588 DEBUG quick_setup killed matlab engine