2008-09-22 15:19:45,117 DEBUG root about to write control file parameters to --yearbase 2008 --pingtype bb --cfgbase MGLN46MV --cruisename MGLN46MV --instclass os --instname os150 --dbname a_mv --datatype uhdas --datadir /home/data/MGLN46MV/raw/os150 --cfgpath /home/data/MGLN46MV/proc/os150bb/config --ens_len 300 --ping_headcorr --hcorr_inst ashtech --use_topo4edit ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto --acc_heading_cutoff 0.020000 2008-09-22 15:19:45,122 DEBUG quick_adcp progdir = /home/currents/programs 2008-09-22 15:19:45,122 DEBUG quick_adcp binos = lnx 2008-09-22 15:19:45,123 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2008-09-22 15:19:45,123 DEBUG quick_setup yearbase is 2008, proc_yearbase is 2008 2008-09-22 15:19:45,123 DEBUG quick_setup processing data logged with uhdas: 2008-09-22 15:19:45,124 DEBUG quick_setup datatype is uhdas 2008-09-22 15:19:45,124 DEBUG quick_setup pingtype is bb 2008-09-22 15:19:45,124 DEBUG quick_setup instclass is os 2008-09-22 15:19:45,124 DEBUG quick_setup no post-processing heading correction will be used 2008-09-22 15:19:45,124 DEBUG quick_setup transducer depth set in *_cfg.m file 2008-09-22 15:19:45,125 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os150'; pingtype = 'bb'; proc_yearbase = 2008; yearbase = 2008; cfg =get_uhdascfg('cfgbase' , 'MGLN46MV',... 'cfgpath' , '/home/data/MGLN46MV/proc/os150bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2008-09-22 15:19:45,125 DEBUG quick_setup ------- starting Matlab engine ------- 2008-09-22 15:19:45,125 DEBUG quick_setup ['/home/currents/programs/matlab'] 2008-09-22 15:19:45,131 DEBUG call_matlab starting to wait for initial prompt 2008-09-22 15:19:46,151 DEBUG call_matlab received initial prompt 2008-09-22 15:19:46,310 DEBUG quick_adcp cwd is /home/data/MGLN46MV/proc/os150bb about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2008-09-22 15:19:46,310 DEBUG quick_adcp original fix file is a_mv.gps 2008-09-22 15:19:46,310 DEBUG quick_adcp smoothed nav file is refsm.sm 2008-09-22 15:19:46,311 DEBUG quick_asect extracting matlab files for os150, bb pings 2008-09-22 15:19:46,474 DEBUG quick_subs found 118 files using wildcard expansion from "/home/data/MGLN46MV/raw/os150/*.raw" 2008-09-22 15:19:46,474 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw /home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw 2008-09-22 15:19:46,474 DEBUG quick_adcp LASTFILES invoked. using only 118 files from end of filelist 2008-09-22 15:19:46,474 DEBUG quick_adcp using delblks = 1 2008-09-22 15:19:46,474 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw /home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw 2008-09-22 15:19:46,476 DEBUG quick_adcp Mon Sep 22 15:19:46 2008 running quick_adcp.py as follows: --cntfile /home/data/MGLN46MV/proc/os150bb/os150bb_qpy.cnt ----- adcpsect variables ------ afilebase a_mv cbasename contour dbname a_mv dbpath ../adcpdb deeper_boundaries [50, 75, 100, 125, 150, 175, 200, 225, 250, 275, 300] firstdepth 13 gridnum 100 increment 4 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2008 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.02 adjust_time 1 afilebase a_mv allow_reload True auto True bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase MGLN46MV cfgpath /home/data/MGLN46MV/proc/os150bb/config cntfile /home/data/MGLN46MV/proc/os150bb/os150bb_qpy.cnt commands None cruisename MGLN46MV data_def vmadcp.def datadir /home/data/MGLN46MV/raw/os150 datafile_glob *.raw datatype uhdas dbname a_mv dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False filelist ['/home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw', '/home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 13 fixfile a_mv.gps hcorr_inst ashtech head_func None help False hidedisplay True howto_lta False howto_ping False instclass os instname os150 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os150'; pingtype = 'bb'; proc_yearbase = 2008; yearbase = 2008; cfg =get_uhdascfg('cfgbase' , 'MGLN46MV',... 'cfgpath' , '/home/data/MGLN46MV/proc/os150bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_mv.gps overview False pgmin 50 ping_headcorr True pingtype bb post_headcorr False proc_yearbase 2008 procdir os150bb progdir /home/currents/programs quiet True rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw', '/home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_260_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_261_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw', '/home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2008 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2008-09-22 15:19:46,476 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2008-09-22 15:19:46,476 DEBUG quick_run scanning files for time ranges... 2008-09-22 15:19:46,476 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb/scan 2008-09-22 15:19:46,476 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/scan 2008-09-22 15:19:46,476 DEBUG quick_setup running python command "method" 2008-09-22 15:19:46,477 DEBUG call_matlab --> clear all 2008-09-22 15:19:46,481 DEBUG call_matlab <-- >> 2008-09-22 15:19:46,481 DEBUG call_matlab --> close all 2008-09-22 15:19:46,520 DEBUG call_matlab <-- >> 2008-09-22 15:19:46,521 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/scan 2008-09-22 15:19:46,523 DEBUG call_matlab <-- >> 2008-09-22 15:19:46,523 DEBUG call_matlab --> scan_tmp 2008-09-22 15:19:47,060 DEBUG call_matlab <-- getting config files from "/home/data/MGLN46MV/proc/os150bb/config" running "MGLN46MV_cfg.m" running "MGLN46MV_proc.m" writing scan info to a_mv.scn >> 2008-09-22 15:19:47,060 DEBUG quick_run writing time range from a_mv.scn to a_mv.tr 2008-09-22 15:19:47,060 DEBUG quick_run getting scan time range 2008-09-22 15:19:47,060 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,060 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/scan 2008-09-22 15:19:47,060 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,061 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,061 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,062 DEBUG quick_subs start_end_time 2008/09/12 21:19:45 to 2008/09/22 15:17:26 2008-09-22 15:19:47,062 DEBUG quick_subs dd0: 255.888715 dd1: 265.637106 2008-09-22 15:19:47,062 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,063 DEBUG quick_adcp looking for database with adcpdb/a_mv*.blk 2008-09-22 15:19:47,063 DEBUG quick_adcp database found: listing blocks 2008-09-22 15:19:47,063 DEBUG quick_subs removing a_mvdir.blk 2008-09-22 15:19:47,064 DEBUG quick_subs about to run mkblkdir 2008-09-22 15:19:47,064 DEBUG quick_subs database still exists; rerunning mkdirblk 2008-09-22 15:19:47,064 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2008-09-22 15:19:47,073 DEBUG quick_subs database passes. 2008-09-22 15:19:47,074 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,074 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,074 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,074 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,074 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,074 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,075 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,075 DEBUG quick_subs dd0: 255.892211 dd1: 265.615995 2008-09-22 15:19:47,075 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,075 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,075 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,075 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,076 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,076 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,076 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,076 DEBUG quick_subs dd0: 255.892211 dd1: 265.615995 2008-09-22 15:19:47,076 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2008-09-22 15:19:47,076 DEBUG quick_adcp origdb_time_range is 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,077 DEBUG quick_adcp (255.892211 to 265.615995) 2008-09-22 15:19:47,077 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2008-09-22 15:19:47,077 DEBUG quick_subs getting current (remaining after deletion) database times 2008-09-22 15:19:47,077 DEBUG quick_subs ['adcpdb/a_mv001.blk', 'adcpdb/a_mv006.blk', 'adcpdb/a_mv010.blk', 'adcpdb/a_mv005.blk', 'adcpdb/a_mv009.blk', 'adcpdb/a_mv011.blk', 'adcpdb/a_mv019.blk', 'adcpdb/a_mv018.blk', 'adcpdb/a_mvdir.blk', 'adcpdb/a_mv012.blk', 'adcpdb/a_mv002.blk', 'adcpdb/a_mv004.blk', 'adcpdb/a_mv013.blk', 'adcpdb/a_mv008.blk', 'adcpdb/a_mv007.blk', 'adcpdb/a_mv017.blk', 'adcpdb/a_mv016.blk', 'adcpdb/a_mv003.blk', 'adcpdb/a_mv014.blk', 'adcpdb/a_mv020.blk', 'adcpdb/a_mv015.blk'] 2008-09-22 15:19:47,077 DEBUG quick_subs length is 21 2008-09-22 15:19:47,078 DEBUG quick_subs removing a_mvdir.blk 2008-09-22 15:19:47,078 DEBUG quick_subs about to run mkblkdir 2008-09-22 15:19:47,078 DEBUG quick_subs database still exists; rerunning mkdirblk 2008-09-22 15:19:47,078 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2008-09-22 15:19:47,087 DEBUG quick_subs database passes. 2008-09-22 15:19:47,087 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,087 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,087 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,087 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,087 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,088 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,088 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,088 DEBUG quick_subs dd0: 255.892211 dd1: 265.615995 2008-09-22 15:19:47,088 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,089 DEBUG quick_subs reading time range 2008-09-22 15:19:47,089 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,089 DEBUG quick_subs dd0: 255.892211 dd1: 265.615995 2008-09-22 15:19:47,089 INFO quick_subs Mon Sep 22 15:19:47 2008 2008-09-22 15:19:47,089 INFO quick_subs checking database time range by listblk 2008-09-22 15:19:47,089 DEBUG quick_subs removing a_mvdir.blk 2008-09-22 15:19:47,090 DEBUG quick_subs about to run mkblkdir 2008-09-22 15:19:47,090 DEBUG quick_subs database still exists; rerunning mkdirblk 2008-09-22 15:19:47,090 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2008-09-22 15:19:47,098 DEBUG quick_subs database passes. 2008-09-22 15:19:47,099 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,099 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,099 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,099 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,099 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,100 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,100 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 14:47:02 2008-09-22 15:19:47,100 DEBUG quick_subs dd0: 255.892211 dd1: 265.615995 2008-09-22 15:19:47,102 INFO quick_subs found line /* 0 n= 146 a_mv001.blk */ 2008/09/12 21:24:47 to 2008/09/13 09:31:40 2008-09-22 15:19:47,102 INFO quick_subs found line /* 1 n= 146 a_mv002.blk */ 2008/09/13 09:36:41 to 2008/09/13 21:43:10 2008-09-22 15:19:47,102 INFO quick_subs found line /* 2 n= 146 a_mv003.blk */ 2008/09/13 21:48:12 to 2008/09/14 09:55:48 2008-09-22 15:19:47,102 INFO quick_subs found line /* 3 n= 146 a_mv004.blk */ 2008/09/14 10:00:48 to 2008/09/14 22:07:45 2008-09-22 15:19:47,102 INFO quick_subs found line /* 4 n= 146 a_mv005.blk */ 2008/09/14 22:12:46 to 2008/09/15 10:20:03 2008-09-22 15:19:47,102 INFO quick_subs found line /* 5 n= 146 a_mv006.blk */ 2008/09/15 10:25:03 to 2008/09/15 22:35:03 2008-09-22 15:19:47,102 INFO quick_subs found line /* 6 n= 146 a_mv007.blk */ 2008/09/15 22:40:04 to 2008/09/16 10:48:13 2008-09-22 15:19:47,102 INFO quick_subs found line /* 7 n= 146 a_mv008.blk */ 2008/09/16 10:53:15 to 2008/09/16 23:03:41 2008-09-22 15:19:47,103 INFO quick_subs found line /* 8 n= 146 a_mv009.blk */ 2008/09/16 23:08:43 to 2008/09/17 11:16:49 2008-09-22 15:19:47,103 INFO quick_subs found line /* 9 n= 146 a_mv010.blk */ 2008/09/17 11:21:49 to 2008/09/17 23:30:18 2008-09-22 15:19:47,103 INFO quick_subs found line /* 10 n= 146 a_mv011.blk */ 2008/09/17 23:35:20 to 2008/09/18 11:42:09 2008-09-22 15:19:47,103 INFO quick_subs found line /* 11 n= 146 a_mv012.blk */ 2008/09/18 11:47:09 to 2008/09/18 23:53:42 2008-09-22 15:19:47,103 INFO quick_subs found line /* 12 n= 146 a_mv013.blk */ 2008/09/18 23:58:42 to 2008/09/19 12:10:10 2008-09-22 15:19:47,103 INFO quick_subs found line /* 13 n= 146 a_mv014.blk */ 2008/09/19 12:15:10 to 2008/09/20 00:21:35 2008-09-22 15:19:47,103 INFO quick_subs found line /* 14 n= 146 a_mv015.blk */ 2008/09/20 00:26:35 to 2008/09/20 12:33:36 2008-09-22 15:19:47,103 INFO quick_subs found line /* 15 n= 146 a_mv016.blk */ 2008/09/20 12:38:36 to 2008/09/21 00:46:18 2008-09-22 15:19:47,103 INFO quick_subs found line /* 16 n= 146 a_mv017.blk */ 2008/09/21 00:51:18 to 2008/09/21 13:00:47 2008-09-22 15:19:47,104 INFO quick_subs found line /* 17 n= 146 a_mv018.blk */ 2008/09/21 13:05:50 to 2008/09/22 01:21:26 2008-09-22 15:19:47,104 INFO quick_subs found line /* 18 n= 146 a_mv019.blk */ 2008/09/22 01:26:29 to 2008/09/22 13:36:45 2008-09-22 15:19:47,104 INFO quick_subs found line /* 19 n= 14 a_mv020.blk */ 2008/09/22 13:41:45 to 2008/09/22 14:47:02 2008-09-22 15:19:47,104 INFO quick_subs scan data start at 255.8887153 2008-09-22 15:19:47,104 INFO quick_subs scan time range: 2008/09/12 21:19:45 to 2008/09/22 15:17:26 2008-09-22 15:19:47,104 INFO quick_subs codasdb ends at 265.6159954 (2008/09/22 14:47:02) 2008-09-22 15:19:47,104 DEBUG quick_subs ... changed dirs, in /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,105 DEBUG quick_subs deleting these files: ['a_mv020.blk'] 2008-09-22 15:19:47,105 DEBUG quick_subs getting current (remaining after deletion) database times 2008-09-22 15:19:47,105 DEBUG quick_subs ['adcpdb/a_mv001.blk', 'adcpdb/a_mv006.blk', 'adcpdb/a_mv010.blk', 'adcpdb/a_mv005.blk', 'adcpdb/a_mv009.blk', 'adcpdb/a_mv011.blk', 'adcpdb/a_mv019.blk', 'adcpdb/a_mv018.blk', 'adcpdb/a_mv012.blk', 'adcpdb/a_mv002.blk', 'adcpdb/a_mv004.blk', 'adcpdb/a_mv013.blk', 'adcpdb/a_mv008.blk', 'adcpdb/a_mv007.blk', 'adcpdb/a_mv017.blk', 'adcpdb/a_mv016.blk', 'adcpdb/a_mv003.blk', 'adcpdb/a_mv014.blk', 'adcpdb/a_mv015.blk'] 2008-09-22 15:19:47,105 DEBUG quick_subs length is 19 2008-09-22 15:19:47,105 DEBUG quick_subs about to run mkblkdir 2008-09-22 15:19:47,106 DEBUG quick_subs database still exists; rerunning mkdirblk 2008-09-22 15:19:47,106 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2008-09-22 15:19:47,114 DEBUG quick_subs database passes. 2008-09-22 15:19:47,115 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,115 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,115 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,115 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,115 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,115 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,116 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 13:36:45 2008-09-22 15:19:47,116 DEBUG quick_subs dd0: 255.892211 dd1: 265.567187 2008-09-22 15:19:47,116 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,116 DEBUG quick_subs reading time range 2008-09-22 15:19:47,116 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 13:36:45 2008-09-22 15:19:47,116 DEBUG quick_subs dd0: 255.892211 dd1: 265.567187 2008-09-22 15:19:47,116 DEBUG quick_subs codas database currently goes from 2008/09/12 21:24:47 to 2008/09/22 13:36:45 2008-09-22 15:19:47,117 DEBUG quick_subs (255.892211 to 265.567187) 2008-09-22 15:19:47,117 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019 2008-09-22 15:19:47,118 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 2008-09-22 15:19:47,118 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019'] 2008-09-22 15:19:47,118 DEBUG quick_subs checked: unloaded blkstrs: ['020'] 2008-09-22 15:19:47,118 DEBUG quick_subs first unloaded file is load/ens_blk020.cmd 2008-09-22 15:19:47,119 DEBUG quick_subs data goes from 2008/09/22 13:41:45 to 2008/09/22 15:17:26 2008-09-22 15:19:47,119 DEBUG quick_subs (265.570660 to 265.637106) 2008-09-22 15:19:47,119 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw /home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_261_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_261_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_261_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_261_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_261_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw 2008-09-22 15:19:47,119 INFO quick_run Mon Sep 22 15:19:47 2008 2008-09-22 15:19:47,119 INFO quick_run about to load uhdas files 2008-09-22 15:19:47,119 INFO quick_run /home/data/MGLN46MV/raw/os150/mv2008_255_76781.raw /home/data/MGLN46MV/raw/os150/mv2008_255_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_256_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_256_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_256_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_256_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_256_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_257_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_257_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_257_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_257_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_257_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_258_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_258_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_258_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_258_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_258_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_259_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_259_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_259_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_259_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_259_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_260_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_260_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_260_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_260_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_260_43200.raw 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/home/data/MGLN46MV/raw/os150/mv2008_262_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_262_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_262_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_262_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_262_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_262_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_263_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_263_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_263_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_263_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_263_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_264_50400.raw /home/data/MGLN46MV/raw/os150/mv2008_264_57600.raw /home/data/MGLN46MV/raw/os150/mv2008_264_64800.raw /home/data/MGLN46MV/raw/os150/mv2008_264_72000.raw /home/data/MGLN46MV/raw/os150/mv2008_264_79200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_00000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_07200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_14400.raw /home/data/MGLN46MV/raw/os150/mv2008_265_21600.raw /home/data/MGLN46MV/raw/os150/mv2008_265_28800.raw /home/data/MGLN46MV/raw/os150/mv2008_265_36000.raw /home/data/MGLN46MV/raw/os150/mv2008_265_43200.raw /home/data/MGLN46MV/raw/os150/mv2008_265_50400.raw 2008-09-22 15:19:47,119 DEBUG quick_setup load/ldcodas.tmp exists 2008-09-22 15:19:47,119 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,120 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/load 2008-09-22 15:19:47,120 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,120 DEBUG quick_subs in /home/data/MGLN46MV/proc/os150bb/load 2008-09-22 15:19:47,120 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019'] 2008-09-22 15:19:47,121 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020'] 2008-09-22 15:19:47,121 DEBUG quick_subs starttime is 2008/09/22 13:41:45 2008-09-22 15:19:47,121 DEBUG quick_subs RESETTING thisload_time_range 2008-09-22 15:19:47,121 DEBUG quick_subs time range of data to be loaded: 2008/09/22 13:41:45 to 2008/09/22 15:17:26 2008-09-22 15:19:47,121 DEBUG quick_subs data startdd 265.570660 data enddd 265.637106 2008-09-22 15:19:47,121 DEBUG quick_subs about to load from these cmd files ['ens_blk020.cmd'] 2008-09-22 15:19:47,121 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_mv DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2008 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk020.cmd 2008-09-22 15:19:47,122 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2008-09-22 15:19:47,131 DEBUG quick_subs removing a_mvdir.blk 2008-09-22 15:19:47,131 DEBUG quick_subs about to run mkblkdir 2008-09-22 15:19:47,131 DEBUG quick_subs database still exists; rerunning mkdirblk 2008-09-22 15:19:47,131 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2008-09-22 15:19:47,140 DEBUG quick_subs database passes. 2008-09-22 15:19:47,141 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,141 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,141 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,141 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,141 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,142 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,142 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 15:17:09 2008-09-22 15:19:47,142 DEBUG quick_subs dd0: 255.892211 dd1: 265.636910 2008-09-22 15:19:47,142 DEBUG quick_subs writing time range from a_mv.lst to a_mv.tr 2008-09-22 15:19:47,142 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,142 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,143 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,143 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2008-09-22 15:19:47,143 DEBUG quick_subs extracting time range 2008-09-22 15:19:47,143 DEBUG quick_subs start_end_time 2008/09/12 21:24:47 to 2008/09/22 15:17:09 2008-09-22 15:19:47,143 DEBUG quick_subs dd0: 255.892211 dd1: 265.636910 2008-09-22 15:19:47,143 DEBUG quick_adcp loaded_time_range is 2008/09/12 21:24:47 to 2008/09/22 15:17:09 2008-09-22 15:19:47,144 DEBUG quick_adcp (255.892211 to 265.636910) 2008-09-22 15:19:47,144 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,144 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/adcpdb 2008-09-22 15:19:47,144 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,144 DEBUG quick_subs dbname: a_mv output: a_mv.cnh time_ranges: all 2008-09-22 15:19:47,144 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2008-09-22 15:19:47,166 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2008-09-22 15:19:47,167 DEBUG quick_run executing commands from /home/data/MGLN46MV/proc/os150bb/edit 2008-09-22 15:19:47,167 DEBUG quick_run setup.m exists. not replacing 2008-09-22 15:19:47,167 DEBUG quick_run asetup.m exists. not replacing 2008-09-22 15:19:47,167 DEBUG quick_run aflagit_setup.m exists. not replacing 2008-09-22 15:19:47,167 DEBUG quick_run ------------ step 4: run setflags ------------- 2008-09-22 15:19:47,167 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,167 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/edit 2008-09-22 15:19:47,168 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,168 DEBUG quick_subs dbname: ../adcpdb/a_mv pg_min: 50 set_range_bit time_ranges: all 2008-09-22 15:19:47,168 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2008-09-22 15:19:47,212 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2008-09-22 15:19:47,213 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,213 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:47,213 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,216 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2008-09-22 15:19:47,216 DEBUG quick_run hcorr_inst is ashtech 2008-09-22 15:19:47,216 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2008-09-22 15:19:47,216 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,216 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/rotate 2008-09-22 15:19:47,216 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,216 DEBUG quick_subs dbname: ../../adcpdb/a_mv output: scn.hdg step_size= 1 year_base= 2008 time_ranges: all 2008-09-22 15:19:47,217 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2008-09-22 15:19:47,248 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:47,248 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/rotate 2008-09-22 15:19:47,248 DEBUG quick_setup running python command "method" 2008-09-22 15:19:47,481 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') hcorfile = 'ens_hcorr.asc'; proc_yearbase = 2008; cruiseid = 'MGLN46MV'; if exist(hcorfile) plot_hcorstats('comment', cruiseid,... 'proc_yearbase', proc_yearbase,... 'plot_ddrange', 1,... 'plottype','fancy',... 'hcorfile', hcorfile,... 'gps_attname', 'ashtech',... 'cruiseid', cruiseid,... 'outfilebase', 'hcorr'); end 2008-09-22 15:19:49,139 DEBUG quick_run ------------ step 7: rotate ------------- 2008-09-22 15:19:49,139 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,139 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/rotate 2008-09-22 15:19:49,140 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,171 DEBUG quick_subs last rotated time from log file: 2008/09/22 14:47:25 2008-09-22 15:19:49,171 DEBUG quick_subs time range of currently loaded data: 2008/09/12 21:24:47 to 2008/09/22 15:17:09 2008-09-22 15:19:49,171 DEBUG quick_subs (255.892211 to 265.636910) 2008-09-22 15:19:49,172 DEBUG quick_setup cal/rotate/rotate.tmp exists 2008-09-22 15:19:49,172 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,172 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/rotate 2008-09-22 15:19:49,172 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,172 DEBUG quick_subs DB_NAME: ../../adcpdb/a_mv LOG_FILE: rotate.log TIME_RANGE: 2008/09/22 13:41:45 to 2008/09/22 15:17:26 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2008 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2008-09-22 15:19:49,172 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2008-09-22 15:19:49,177 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2008-09-22 15:19:49,178 DEBUG quick_setup nav/as_nav.tmp exists 2008-09-22 15:19:49,178 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,178 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:49,178 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,178 DEBUG quick_subs dbname: ../adcpdb/a_mv output: a_mv step_size: 1 ndepth: 20 time_ranges: separate year_base= 2008 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2008/09/12 21:24:47 to 2008/09/22 15:17:09 /* the whole time range */ 2008-09-22 15:19:49,178 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2008-09-22 15:19:49,240 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2008-09-22 15:19:49,241 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,241 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:49,241 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,241 DEBUG quick_subs fix_file_type: simple reference_file: a_mv.nav fix_file: a_mv.gps output: a_mv.ref year_base= 2008 ensemble_length= 300 gap_tolerance= 10 2008-09-22 15:19:49,241 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2008-09-22 15:19:49,286 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2008-09-22 15:19:49,286 DEBUG quick_setup nav/smoothr.tmp exists 2008-09-22 15:19:49,286 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,286 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:49,286 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,287 DEBUG quick_subs reference_file: a_mv.nav refabs_output: a_mv.ref output: a_mv.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2008-09-22 15:19:49,287 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2008-09-22 15:19:49,516 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:49,516 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:49,516 DEBUG quick_setup running python command "method" 2008-09-22 15:19:49,517 DEBUG call_matlab --> clear all 2008-09-22 15:19:49,547 DEBUG call_matlab <-- >> 2008-09-22 15:19:49,547 DEBUG call_matlab --> close all 2008-09-22 15:19:49,603 DEBUG call_matlab <-- >> 2008-09-22 15:19:49,603 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:49,605 DEBUG call_matlab <-- >> 2008-09-22 15:19:49,605 DEBUG call_matlab --> refsm 2008-09-22 15:19:50,643 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_mv opened Searching CODAS database ==> ../adcpdb/a_mv for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 2794 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2008-09-22 15:19:50,643 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2008-09-22 15:19:50,643 DEBUG quick_setup nav/putnav.tmp exists 2008-09-22 15:19:50,644 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:50,644 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:50,644 DEBUG quick_setup running python command "method" 2008-09-22 15:19:50,644 DEBUG quick_subs dbname: ../adcpdb/a_mv position_file: refsm.sm year_base= 2008 tolerance= 5 navigation_sources: gps end 2008-09-22 15:19:50,644 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2008-09-22 15:19:50,718 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2008-09-22 15:19:50,718 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:50,719 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:50,719 DEBUG quick_setup running python command "method" 2008-09-22 15:19:50,720 DEBUG quick_subs Created callrtmp.m 2008-09-22 15:19:50,720 DEBUG call_matlab --> clear all 2008-09-22 15:19:50,726 DEBUG call_matlab <-- >> 2008-09-22 15:19:50,727 DEBUG call_matlab --> close all 2008-09-22 15:19:50,765 DEBUG call_matlab <-- >> 2008-09-22 15:19:50,766 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:50,768 DEBUG call_matlab <-- >> 2008-09-22 15:19:50,768 DEBUG call_matlab --> callrtmp_tmp 2008-09-22 15:19:51,973 DEBUG call_matlab <-- cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV >> 2008-09-22 15:19:51,974 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2008-09-22 15:19:51,974 DEBUG quick_run find profile flags ------------ *** ------------- 2008-09-22 15:19:51,974 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:51,974 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/edit 2008-09-22 15:19:51,974 DEBUG quick_setup running python command "method" 2008-09-22 15:19:52,907 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2008-09-22 15:19:52,907 DEBUG quick_run starting in: /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:52,907 DEBUG quick_run executing commands from: edit 2008-09-22 15:19:52,909 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_mv abadbin_tmp.asc 2008-09-22 15:19:52,916 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_mv 2008-09-22 15:19:52,921 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2008-09-22 15:19:52,965 DEBUG quick_run changing directories back to /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:52,965 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2008-09-22 15:19:52,965 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2008-09-22 15:19:52,965 DEBUG quick_setup nav/as_nav.tmp exists 2008-09-22 15:19:52,966 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:52,966 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:52,966 DEBUG quick_setup running python command "method" 2008-09-22 15:19:52,966 DEBUG quick_subs dbname: ../adcpdb/a_mv output: a_mv step_size: 1 ndepth: 20 time_ranges: separate year_base= 2008 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2008/09/12 21:24:47 to 2008/09/22 15:17:09 /* the whole time range */ 2008-09-22 15:19:52,966 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2008-09-22 15:19:53,027 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2008-09-22 15:19:53,027 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:53,027 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:53,027 DEBUG quick_setup running python command "method" 2008-09-22 15:19:53,028 DEBUG quick_subs fix_file_type: simple reference_file: a_mv.nav fix_file: a_mv.gps output: a_mv.ref year_base= 2008 ensemble_length= 300 gap_tolerance= 10 2008-09-22 15:19:53,028 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2008-09-22 15:19:53,073 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2008-09-22 15:19:53,073 DEBUG quick_setup nav/smoothr.tmp exists 2008-09-22 15:19:53,074 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:53,074 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:53,074 DEBUG quick_setup running python command "method" 2008-09-22 15:19:53,074 DEBUG quick_subs reference_file: a_mv.nav refabs_output: a_mv.ref output: a_mv.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2008-09-22 15:19:53,074 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2008-09-22 15:19:53,342 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:53,343 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:53,343 DEBUG quick_setup running python command "method" 2008-09-22 15:19:53,343 DEBUG call_matlab --> clear all 2008-09-22 15:19:53,354 DEBUG call_matlab <-- >> 2008-09-22 15:19:53,354 DEBUG call_matlab --> close all 2008-09-22 15:19:53,392 DEBUG call_matlab <-- >> 2008-09-22 15:19:53,392 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:53,394 DEBUG call_matlab <-- >> 2008-09-22 15:19:53,394 DEBUG call_matlab --> refsm 2008-09-22 15:19:54,388 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_mv opened Searching CODAS database ==> ../adcpdb/a_mv for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 2794 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2008-09-22 15:19:54,388 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2008-09-22 15:19:54,388 DEBUG quick_setup nav/putnav.tmp exists 2008-09-22 15:19:54,388 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:54,388 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:54,388 DEBUG quick_setup running python command "method" 2008-09-22 15:19:54,389 DEBUG quick_subs dbname: ../adcpdb/a_mv position_file: refsm.sm year_base= 2008 tolerance= 5 navigation_sources: gps end 2008-09-22 15:19:54,389 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2008-09-22 15:19:54,464 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2008-09-22 15:19:54,464 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:54,464 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:54,464 DEBUG quick_setup running python command "method" 2008-09-22 15:19:54,465 DEBUG quick_subs Created callrtmp.m 2008-09-22 15:19:54,465 DEBUG call_matlab --> clear all 2008-09-22 15:19:54,472 DEBUG call_matlab <-- >> 2008-09-22 15:19:54,472 DEBUG call_matlab --> close all 2008-09-22 15:19:54,513 DEBUG call_matlab <-- >> 2008-09-22 15:19:54,513 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:54,516 DEBUG call_matlab <-- >> 2008-09-22 15:19:54,516 DEBUG call_matlab --> callrtmp_tmp 2008-09-22 15:19:55,738 DEBUG call_matlab <-- cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV cruise = MGLN46MV >> 2008-09-22 15:19:55,739 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2008-09-22 15:19:55,739 DEBUG quick_setup edit/lst_temp.tmp exists 2008-09-22 15:19:55,739 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:55,739 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/edit 2008-09-22 15:19:55,739 DEBUG quick_setup running python command "method" 2008-09-22 15:19:55,739 DEBUG quick_subs dbname: ../adcpdb/a_mv output: a_mv.tem step_size= 1 year_base= 2008 time_ranges: all 2008-09-22 15:19:55,740 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2008-09-22 15:19:55,775 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:55,776 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/edit 2008-09-22 15:19:55,776 DEBUG quick_setup running python command "method" 2008-09-22 15:19:56,390 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2008-09-22 15:19:56,746 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2008-09-22 15:19:56,746 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:56,746 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/botmtrk 2008-09-22 15:19:56,747 DEBUG quick_setup running python command "method" 2008-09-22 15:19:56,747 DEBUG quick_subs dbname: ../../adcpdb/a_mv output: a_mv.btm step_size= 1 year_base= 2008 time_ranges: 2008/09/12 21:24:47 to 2008/09/22 15:17:09 /* whole time range */ 2008-09-22 15:19:56,747 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2008-09-22 15:19:56,762 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2008-09-22 15:19:56,762 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:56,762 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/botmtrk 2008-09-22 15:19:56,762 DEBUG quick_setup running python command "method" 2008-09-22 15:19:56,762 DEBUG quick_subs fix_file_type: simple reference_file: a_mv.btm fix_file: ../../nav/a_mv.gps output: a_mv.ref year_base= 2008 ensemble_length= 300 gap_tolerance= 60 2008-09-22 15:19:56,763 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2008-09-22 15:19:56,767 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:56,768 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/botmtrk 2008-09-22 15:19:56,768 DEBUG quick_setup running python command "method" 2008-09-22 15:19:56,768 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_mv.ref','a_mv.btm',... 'ADCP MGLN46MV step size 1 ', 1); 2008-09-22 15:19:56,885 DEBUG quick_setup nav/as_nav.tmp exists 2008-09-22 15:19:56,885 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:56,885 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/nav 2008-09-22 15:19:56,885 DEBUG quick_setup running python command "method" 2008-09-22 15:19:56,885 DEBUG quick_subs dbname: ../adcpdb/a_mv output: a_mv step_size: 1 ndepth: 20 time_ranges: separate year_base= 2008 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2008/09/12 21:24:47 to 2008/09/22 15:17:09 /* the whole time range */ 2008-09-22 15:19:56,919 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2008-09-22 15:19:57,297 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2008-09-22 15:19:57,297 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:57,297 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/watertrk 2008-09-22 15:19:57,297 DEBUG quick_setup running python command "method" 2008-09-22 15:19:57,298 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_mv.gps reference_file: ../../nav/a_mv.nav output_file: a_mv_7.cal year_base= 2008 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2008-09-22 15:19:57,298 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2008-09-22 15:19:57,316 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:57,316 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/cal/watertrk 2008-09-22 15:19:57,316 DEBUG quick_setup running python command "method" 2008-09-22 15:19:57,316 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_mv_7.cal', 'ADCP MGLN46MV 7ens') 2008-09-22 15:19:57,317 DEBUG call_matlab --> clear all 2008-09-22 15:19:57,321 DEBUG call_matlab <-- >> 2008-09-22 15:19:57,321 DEBUG call_matlab --> close all 2008-09-22 15:19:57,360 DEBUG call_matlab <-- >> 2008-09-22 15:19:57,360 DEBUG call_matlab --> cd /home/data/MGLN46MV/proc/os150bb/cal/watertrk 2008-09-22 15:19:57,363 DEBUG call_matlab <-- >> 2008-09-22 15:19:57,363 DEBUG call_matlab --> calladcpcal_tmp 2008-09-22 15:19:58,151 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [8x11 double] igood: [8x1 double] >> 2008-09-22 15:19:58,151 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2008-09-22 15:19:58,152 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:58,152 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/vector 2008-09-22 15:19:58,152 DEBUG quick_setup running python command "method" 2008-09-22 15:19:58,152 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_mv.tmp 2008-09-22 15:19:58,158 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:58,158 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/vector 2008-09-22 15:19:58,158 DEBUG quick_setup running python command "method" 2008-09-22 15:19:58,158 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2008-09-22 15:19:58,239 DEBUG quick_asect done making vector matfiles 2008-09-22 15:19:58,239 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:58,239 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/contour 2008-09-22 15:19:58,239 DEBUG quick_setup running python command "method" 2008-09-22 15:19:58,240 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_mv.tmp 2008-09-22 15:19:58,248 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:58,248 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/contour 2008-09-22 15:19:58,248 DEBUG quick_setup running python command "method" 2008-09-22 15:19:58,249 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2008-09-22 15:19:58,385 DEBUG quick_setup starting in /home/data/MGLN46MV/proc/os150bb 2008-09-22 15:19:58,385 DEBUG quick_setup executing commands from /home/data/MGLN46MV/proc/os150bb/contour 2008-09-22 15:19:58,385 DEBUG quick_setup about to run getmat -rs -f allbins_ ../adcpdb/a_mv 2008-09-22 15:19:58,656 DEBUG quick_asect done running getmat with "allbins" 2008-09-22 15:19:58,657 INFO root copying NOFIG to /home/adcp/www/figures/os150bb_hcorr_plot.png 2008-09-22 15:19:58,657 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/os150bb_hcorr_plot_thumb.png 2008-09-22 15:19:58,658 DEBUG root matfile is contour/contour_uv.mat 2008-09-22 15:19:58,665 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/os150bb_cont_uv.mat 2008-09-22 15:19:58,665 DEBUG root matfile is vector/vector_uv.mat 2008-09-22 15:19:58,666 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/os150bb_vect_uv.mat 2008-09-22 15:19:58,666 DEBUG root matfile is contour/contour_xy.mat 2008-09-22 15:19:58,666 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/os150bb_cont_xy.mat 2008-09-22 15:19:58,666 DEBUG root matfile is vector/vector_xy.mat 2008-09-22 15:19:58,667 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/os150bb_vect_xy.mat 2008-09-22 15:19:58,667 DEBUG root about to copy file edit/a_mv.tem to /home/adcp/www/data/os150bb_temp.asc 2008-09-22 15:19:58,667 INFO root copying edit/a_mv.tem to /home/adcp/www/data/os150bb_temp.asc 2008-09-22 15:19:58,668 INFO root Ending quick_adcp.py 2008-09-22 15:19:58,770 DEBUG quick_setup killed matlab engine