2009-12-16 02:11:28,877 DEBUG root about to write control file parameters to --yearbase 2009 --pingtype nb --cfgbase RR0916 --cruisename RR0916 --instclass nb --instname nb150 --dbname a_rr --datatype uhdas --datadir /home/data/RR0916/raw/nb150 --cfgpath /home/data/RR0916/proc/nb150/config --ens_len 300 --ping_headcorr --hcorr_inst ashtech --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto 2009-12-16 02:11:28,879 DEBUG quick_adcp progdir = /home/currents/programs 2009-12-16 02:11:28,879 DEBUG quick_adcp binos = lnx 2009-12-16 02:11:28,879 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2009-12-16 02:11:28,879 DEBUG quick_setup yearbase is 2009, proc_yearbase is 2009 2009-12-16 02:11:28,879 DEBUG quick_setup processing data logged with uhdas: 2009-12-16 02:11:28,879 DEBUG quick_setup datatype is uhdas 2009-12-16 02:11:28,879 DEBUG quick_setup pingtype is nb 2009-12-16 02:11:28,880 DEBUG quick_setup instclass is nb 2009-12-16 02:11:28,880 DEBUG quick_setup no post-processing heading correction will be used 2009-12-16 02:11:28,880 DEBUG quick_setup transducer depth set in *_cfg.m file 2009-12-16 02:11:28,880 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'RR0916',... 'cfgpath' , '/home/data/RR0916/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2009-12-16 02:11:28,880 DEBUG quick_setup ------- starting Matlab engine ------- 2009-12-16 02:11:28,880 DEBUG quick_setup ['/home/currents/programs/matlab'] 2009-12-16 02:11:28,883 DEBUG call_matlab starting to wait for initial prompt 2009-12-16 02:11:29,560 DEBUG call_matlab received initial prompt 2009-12-16 02:11:29,715 DEBUG quick_adcp cwd is /home/data/RR0916/proc/nb150 about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-12-16 02:11:29,716 DEBUG quick_adcp original fix file is a_rr.gps 2009-12-16 02:11:29,716 DEBUG quick_adcp smoothed nav file is refsm.sm 2009-12-16 02:11:29,716 DEBUG quick_asect extracting matlab files for nb150, nb pings 2009-12-16 02:11:29,810 DEBUG quick_subs found 85 files using wildcard expansion from "/home/data/RR0916/raw/nb150/*.raw" 2009-12-16 02:11:29,810 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR0916/raw/nb150/rr2009_342_11483.raw /home/data/RR0916/raw/nb150/rr2009_342_14400.raw /home/data/RR0916/raw/nb150/rr2009_342_21600.raw /home/data/RR0916/raw/nb150/rr2009_342_28800.raw /home/data/RR0916/raw/nb150/rr2009_342_36000.raw /home/data/RR0916/raw/nb150/rr2009_342_43200.raw /home/data/RR0916/raw/nb150/rr2009_342_50400.raw /home/data/RR0916/raw/nb150/rr2009_342_57600.raw /home/data/RR0916/raw/nb150/rr2009_342_64800.raw /home/data/RR0916/raw/nb150/rr2009_342_72000.raw /home/data/RR0916/raw/nb150/rr2009_342_79200.raw /home/data/RR0916/raw/nb150/rr2009_343_00000.raw /home/data/RR0916/raw/nb150/rr2009_343_07200.raw /home/data/RR0916/raw/nb150/rr2009_343_14400.raw /home/data/RR0916/raw/nb150/rr2009_343_21600.raw /home/data/RR0916/raw/nb150/rr2009_343_28800.raw /home/data/RR0916/raw/nb150/rr2009_343_36000.raw /home/data/RR0916/raw/nb150/rr2009_343_43200.raw /home/data/RR0916/raw/nb150/rr2009_343_50400.raw /home/data/RR0916/raw/nb150/rr2009_343_57600.raw /home/data/RR0916/raw/nb150/rr2009_343_64800.raw /home/data/RR0916/raw/nb150/rr2009_343_72000.raw /home/data/RR0916/raw/nb150/rr2009_343_79200.raw /home/data/RR0916/raw/nb150/rr2009_344_00000.raw /home/data/RR0916/raw/nb150/rr2009_344_07200.raw /home/data/RR0916/raw/nb150/rr2009_344_14400.raw /home/data/RR0916/raw/nb150/rr2009_344_21600.raw /home/data/RR0916/raw/nb150/rr2009_344_28800.raw /home/data/RR0916/raw/nb150/rr2009_344_36000.raw /home/data/RR0916/raw/nb150/rr2009_344_43200.raw /home/data/RR0916/raw/nb150/rr2009_344_50400.raw /home/data/RR0916/raw/nb150/rr2009_344_57600.raw /home/data/RR0916/raw/nb150/rr2009_344_64800.raw /home/data/RR0916/raw/nb150/rr2009_344_72000.raw /home/data/RR0916/raw/nb150/rr2009_344_79200.raw /home/data/RR0916/raw/nb150/rr2009_345_00000.raw /home/data/RR0916/raw/nb150/rr2009_345_07200.raw /home/data/RR0916/raw/nb150/rr2009_345_14400.raw /home/data/RR0916/raw/nb150/rr2009_345_21600.raw /home/data/RR0916/raw/nb150/rr2009_345_28800.raw /home/data/RR0916/raw/nb150/rr2009_345_36000.raw /home/data/RR0916/raw/nb150/rr2009_345_43200.raw /home/data/RR0916/raw/nb150/rr2009_345_50400.raw /home/data/RR0916/raw/nb150/rr2009_345_57600.raw /home/data/RR0916/raw/nb150/rr2009_345_64800.raw /home/data/RR0916/raw/nb150/rr2009_345_72000.raw /home/data/RR0916/raw/nb150/rr2009_345_79200.raw /home/data/RR0916/raw/nb150/rr2009_346_00000.raw /home/data/RR0916/raw/nb150/rr2009_346_07200.raw /home/data/RR0916/raw/nb150/rr2009_346_14400.raw /home/data/RR0916/raw/nb150/rr2009_346_21600.raw /home/data/RR0916/raw/nb150/rr2009_346_28800.raw /home/data/RR0916/raw/nb150/rr2009_346_36000.raw /home/data/RR0916/raw/nb150/rr2009_346_43200.raw /home/data/RR0916/raw/nb150/rr2009_346_50400.raw /home/data/RR0916/raw/nb150/rr2009_346_57600.raw /home/data/RR0916/raw/nb150/rr2009_346_64800.raw /home/data/RR0916/raw/nb150/rr2009_346_72000.raw /home/data/RR0916/raw/nb150/rr2009_346_79200.raw /home/data/RR0916/raw/nb150/rr2009_347_00000.raw /home/data/RR0916/raw/nb150/rr2009_347_07200.raw /home/data/RR0916/raw/nb150/rr2009_347_14400.raw /home/data/RR0916/raw/nb150/rr2009_347_21600.raw /home/data/RR0916/raw/nb150/rr2009_347_28800.raw /home/data/RR0916/raw/nb150/rr2009_347_36000.raw /home/data/RR0916/raw/nb150/rr2009_347_43200.raw /home/data/RR0916/raw/nb150/rr2009_347_50400.raw /home/data/RR0916/raw/nb150/rr2009_347_57600.raw /home/data/RR0916/raw/nb150/rr2009_347_64800.raw /home/data/RR0916/raw/nb150/rr2009_347_72000.raw /home/data/RR0916/raw/nb150/rr2009_347_79200.raw /home/data/RR0916/raw/nb150/rr2009_348_00000.raw /home/data/RR0916/raw/nb150/rr2009_348_07200.raw /home/data/RR0916/raw/nb150/rr2009_348_14400.raw /home/data/RR0916/raw/nb150/rr2009_348_21600.raw /home/data/RR0916/raw/nb150/rr2009_348_28800.raw /home/data/RR0916/raw/nb150/rr2009_348_36000.raw /home/data/RR0916/raw/nb150/rr2009_348_43200.raw /home/data/RR0916/raw/nb150/rr2009_348_50400.raw /home/data/RR0916/raw/nb150/rr2009_348_57600.raw /home/data/RR0916/raw/nb150/rr2009_348_64800.raw /home/data/RR0916/raw/nb150/rr2009_348_72000.raw /home/data/RR0916/raw/nb150/rr2009_348_79200.raw /home/data/RR0916/raw/nb150/rr2009_349_00000.raw /home/data/RR0916/raw/nb150/rr2009_349_07200.raw 2009-12-16 02:11:29,810 DEBUG quick_adcp LASTFILES invoked. using only 85 files from end of filelist 2009-12-16 02:11:29,810 DEBUG quick_adcp using delblks = 1 2009-12-16 02:11:29,810 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/RR0916/raw/nb150/rr2009_342_11483.raw /home/data/RR0916/raw/nb150/rr2009_342_14400.raw /home/data/RR0916/raw/nb150/rr2009_342_21600.raw /home/data/RR0916/raw/nb150/rr2009_342_28800.raw /home/data/RR0916/raw/nb150/rr2009_342_36000.raw /home/data/RR0916/raw/nb150/rr2009_342_43200.raw /home/data/RR0916/raw/nb150/rr2009_342_50400.raw /home/data/RR0916/raw/nb150/rr2009_342_57600.raw /home/data/RR0916/raw/nb150/rr2009_342_64800.raw /home/data/RR0916/raw/nb150/rr2009_342_72000.raw /home/data/RR0916/raw/nb150/rr2009_342_79200.raw /home/data/RR0916/raw/nb150/rr2009_343_00000.raw /home/data/RR0916/raw/nb150/rr2009_343_07200.raw /home/data/RR0916/raw/nb150/rr2009_343_14400.raw /home/data/RR0916/raw/nb150/rr2009_343_21600.raw /home/data/RR0916/raw/nb150/rr2009_343_28800.raw /home/data/RR0916/raw/nb150/rr2009_343_36000.raw /home/data/RR0916/raw/nb150/rr2009_343_43200.raw /home/data/RR0916/raw/nb150/rr2009_343_50400.raw /home/data/RR0916/raw/nb150/rr2009_343_57600.raw /home/data/RR0916/raw/nb150/rr2009_343_64800.raw /home/data/RR0916/raw/nb150/rr2009_343_72000.raw /home/data/RR0916/raw/nb150/rr2009_343_79200.raw /home/data/RR0916/raw/nb150/rr2009_344_00000.raw /home/data/RR0916/raw/nb150/rr2009_344_07200.raw /home/data/RR0916/raw/nb150/rr2009_344_14400.raw /home/data/RR0916/raw/nb150/rr2009_344_21600.raw /home/data/RR0916/raw/nb150/rr2009_344_28800.raw /home/data/RR0916/raw/nb150/rr2009_344_36000.raw /home/data/RR0916/raw/nb150/rr2009_344_43200.raw /home/data/RR0916/raw/nb150/rr2009_344_50400.raw /home/data/RR0916/raw/nb150/rr2009_344_57600.raw /home/data/RR0916/raw/nb150/rr2009_344_64800.raw /home/data/RR0916/raw/nb150/rr2009_344_72000.raw /home/data/RR0916/raw/nb150/rr2009_344_79200.raw /home/data/RR0916/raw/nb150/rr2009_345_00000.raw /home/data/RR0916/raw/nb150/rr2009_345_07200.raw /home/data/RR0916/raw/nb150/rr2009_345_14400.raw /home/data/RR0916/raw/nb150/rr2009_345_21600.raw /home/data/RR0916/raw/nb150/rr2009_345_28800.raw /home/data/RR0916/raw/nb150/rr2009_345_36000.raw /home/data/RR0916/raw/nb150/rr2009_345_43200.raw /home/data/RR0916/raw/nb150/rr2009_345_50400.raw /home/data/RR0916/raw/nb150/rr2009_345_57600.raw /home/data/RR0916/raw/nb150/rr2009_345_64800.raw /home/data/RR0916/raw/nb150/rr2009_345_72000.raw /home/data/RR0916/raw/nb150/rr2009_345_79200.raw /home/data/RR0916/raw/nb150/rr2009_346_00000.raw /home/data/RR0916/raw/nb150/rr2009_346_07200.raw /home/data/RR0916/raw/nb150/rr2009_346_14400.raw /home/data/RR0916/raw/nb150/rr2009_346_21600.raw /home/data/RR0916/raw/nb150/rr2009_346_28800.raw /home/data/RR0916/raw/nb150/rr2009_346_36000.raw /home/data/RR0916/raw/nb150/rr2009_346_43200.raw /home/data/RR0916/raw/nb150/rr2009_346_50400.raw /home/data/RR0916/raw/nb150/rr2009_346_57600.raw /home/data/RR0916/raw/nb150/rr2009_346_64800.raw /home/data/RR0916/raw/nb150/rr2009_346_72000.raw /home/data/RR0916/raw/nb150/rr2009_346_79200.raw /home/data/RR0916/raw/nb150/rr2009_347_00000.raw /home/data/RR0916/raw/nb150/rr2009_347_07200.raw /home/data/RR0916/raw/nb150/rr2009_347_14400.raw /home/data/RR0916/raw/nb150/rr2009_347_21600.raw /home/data/RR0916/raw/nb150/rr2009_347_28800.raw /home/data/RR0916/raw/nb150/rr2009_347_36000.raw /home/data/RR0916/raw/nb150/rr2009_347_43200.raw /home/data/RR0916/raw/nb150/rr2009_347_50400.raw /home/data/RR0916/raw/nb150/rr2009_347_57600.raw /home/data/RR0916/raw/nb150/rr2009_347_64800.raw /home/data/RR0916/raw/nb150/rr2009_347_72000.raw /home/data/RR0916/raw/nb150/rr2009_347_79200.raw /home/data/RR0916/raw/nb150/rr2009_348_00000.raw /home/data/RR0916/raw/nb150/rr2009_348_07200.raw /home/data/RR0916/raw/nb150/rr2009_348_14400.raw /home/data/RR0916/raw/nb150/rr2009_348_21600.raw /home/data/RR0916/raw/nb150/rr2009_348_28800.raw /home/data/RR0916/raw/nb150/rr2009_348_36000.raw /home/data/RR0916/raw/nb150/rr2009_348_43200.raw /home/data/RR0916/raw/nb150/rr2009_348_50400.raw /home/data/RR0916/raw/nb150/rr2009_348_57600.raw /home/data/RR0916/raw/nb150/rr2009_348_64800.raw /home/data/RR0916/raw/nb150/rr2009_348_72000.raw /home/data/RR0916/raw/nb150/rr2009_348_79200.raw /home/data/RR0916/raw/nb150/rr2009_349_00000.raw /home/data/RR0916/raw/nb150/rr2009_349_07200.raw 2009-12-16 02:11:29,811 DEBUG quick_adcp Wed Dec 16 02:11:29 2009 running quick_adcp.py as follows: --cntfile /home/data/RR0916/proc/nb150/nb150_qpy.cnt ----- adcpsect variables ------ afilebase a_rr cbasename contour dbname a_rr dbpath ../adcpdb deeper_boundaries [50, 75, 125, 175, 225, 275, 325, 375, 425] firstdepth 21 gridnum 40 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2009 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_rr allow_reload True auto True bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase RR0916 cfgpath /home/data/RR0916/proc/nb150/config cntfile /home/data/RR0916/proc/nb150/nb150_qpy.cnt commands None cruisename RR0916 data_def vmadcp.def datadir /home/data/RR0916/raw/nb150 datafile_glob *.raw datatype uhdas dbname a_rr dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/RR0916/raw/nb150/rr2009_342_11483.raw', '/home/data/RR0916/raw/nb150/rr2009_342_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_342_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_342_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_342_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_342_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_342_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_342_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_342_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_342_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_342_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_343_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_343_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_343_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_343_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_343_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_343_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_344_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_344_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_344_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_344_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_344_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_344_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_345_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_345_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_345_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_345_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_345_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_345_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_346_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_346_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_346_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_346_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_346_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_346_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_347_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_347_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_347_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_347_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_347_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_347_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_348_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_348_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_348_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_348_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_348_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_348_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_349_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_349_07200.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 21 fixfile a_rr.gps hcorr_inst ashtech head_func None help False hidedisplay True howto_lta False howto_ping False instclass nb instname nb150 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'RR0916',... 'cfgpath' , '/home/data/RR0916/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_rr.gps overview False pgmin 50 ping_headcorr True pingtype nb post_headcorr False proc_yearbase 2009 procdir nb150 progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/RR0916/raw/nb150/rr2009_342_11483.raw', '/home/data/RR0916/raw/nb150/rr2009_342_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_342_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_342_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_342_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_342_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_342_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_342_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_342_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_342_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_342_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_343_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_343_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_343_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_343_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_343_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_343_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_343_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_343_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_344_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_344_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_344_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_344_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_344_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_344_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_344_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_344_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_345_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_345_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_345_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_345_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_345_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_345_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_345_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_345_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_346_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_346_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_346_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_346_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_346_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_346_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_346_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_346_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_347_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_347_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_347_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_347_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_347_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_347_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_347_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_347_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_07200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_14400.raw', '/home/data/RR0916/raw/nb150/rr2009_348_21600.raw', '/home/data/RR0916/raw/nb150/rr2009_348_28800.raw', '/home/data/RR0916/raw/nb150/rr2009_348_36000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_43200.raw', '/home/data/RR0916/raw/nb150/rr2009_348_50400.raw', '/home/data/RR0916/raw/nb150/rr2009_348_57600.raw', '/home/data/RR0916/raw/nb150/rr2009_348_64800.raw', '/home/data/RR0916/raw/nb150/rr2009_348_72000.raw', '/home/data/RR0916/raw/nb150/rr2009_348_79200.raw', '/home/data/RR0916/raw/nb150/rr2009_349_00000.raw', '/home/data/RR0916/raw/nb150/rr2009_349_07200.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2009 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-12-16 02:11:29,812 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2009-12-16 02:11:29,812 DEBUG quick_run scanning files for time ranges... 2009-12-16 02:11:29,812 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150/scan 2009-12-16 02:11:29,812 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/scan 2009-12-16 02:11:29,812 DEBUG quick_setup running python command "method" 2009-12-16 02:11:29,812 DEBUG call_matlab --> clear all 2009-12-16 02:11:29,816 DEBUG call_matlab <-- >> 2009-12-16 02:11:29,816 DEBUG call_matlab --> close all 2009-12-16 02:11:29,855 DEBUG call_matlab <-- >> 2009-12-16 02:11:29,855 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/scan 2009-12-16 02:11:29,857 DEBUG call_matlab <-- >> 2009-12-16 02:11:29,857 DEBUG call_matlab --> scan_tmp 2009-12-16 02:11:30,408 DEBUG call_matlab <-- getting config files from "/home/data/RR0916/proc/nb150/config" running "RR0916_cfg.m" running "RR0916_proc.m" writing scan info to a_rr.scn >> 2009-12-16 02:11:30,408 DEBUG quick_run writing time range from a_rr.scn to a_rr.tr 2009-12-16 02:11:30,408 DEBUG quick_run getting scan time range 2009-12-16 02:11:30,408 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,409 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/scan 2009-12-16 02:11:30,409 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,409 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,410 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,410 DEBUG quick_subs start_end_time 2009/12/09 03:11:25 to 2009/12/16 02:10:19 2009-12-16 02:11:30,410 DEBUG quick_subs dd0: 342.132928 dd1: 349.090498 2009-12-16 02:11:30,411 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,411 DEBUG quick_adcp looking for database with adcpdb/a_rr*.blk 2009-12-16 02:11:30,411 DEBUG quick_adcp database found: listing blocks 2009-12-16 02:11:30,412 DEBUG quick_subs removing a_rrdir.blk 2009-12-16 02:11:30,412 DEBUG quick_subs about to run mkblkdir 2009-12-16 02:11:30,412 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-12-16 02:11:30,412 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-12-16 02:11:30,420 DEBUG quick_subs database passes. 2009-12-16 02:11:30,421 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,421 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,421 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,421 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,421 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,421 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,422 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,422 DEBUG quick_subs dd0: 342.136435 dd1: 349.065243 2009-12-16 02:11:30,422 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,422 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,422 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,422 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,422 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,423 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,423 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,423 DEBUG quick_subs dd0: 342.136435 dd1: 349.065243 2009-12-16 02:11:30,423 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2009-12-16 02:11:30,423 DEBUG quick_adcp origdb_time_range is 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,423 DEBUG quick_adcp (342.136435 to 349.065243) 2009-12-16 02:11:30,424 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2009-12-16 02:11:30,424 DEBUG quick_subs getting current (remaining after deletion) database times 2009-12-16 02:11:30,424 DEBUG quick_subs ['adcpdb/a_rr015.blk', 'adcpdb/a_rr002.blk', 'adcpdb/a_rr014.blk', 'adcpdb/a_rr017.blk', 'adcpdb/a_rr009.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr011.blk', 'adcpdb/a_rr012.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr016.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rrdir.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr013.blk', 'adcpdb/a_rr010.blk', 'adcpdb/a_rr008.blk', 'adcpdb/a_rr018.blk'] 2009-12-16 02:11:30,424 DEBUG quick_subs length is 19 2009-12-16 02:11:30,424 DEBUG quick_subs removing a_rrdir.blk 2009-12-16 02:11:30,425 DEBUG quick_subs about to run mkblkdir 2009-12-16 02:11:30,425 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-12-16 02:11:30,425 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-12-16 02:11:30,432 DEBUG quick_subs database passes. 2009-12-16 02:11:30,433 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,433 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,433 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,433 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,433 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,434 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,434 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,434 DEBUG quick_subs dd0: 342.136435 dd1: 349.065243 2009-12-16 02:11:30,434 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,434 DEBUG quick_subs reading time range 2009-12-16 02:11:30,434 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,434 DEBUG quick_subs dd0: 342.136435 dd1: 349.065243 2009-12-16 02:11:30,435 INFO quick_subs Wed Dec 16 02:11:30 2009 2009-12-16 02:11:30,435 INFO quick_subs checking database time range by listblk 2009-12-16 02:11:30,435 DEBUG quick_subs removing a_rrdir.blk 2009-12-16 02:11:30,435 DEBUG quick_subs about to run mkblkdir 2009-12-16 02:11:30,435 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-12-16 02:11:30,436 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-12-16 02:11:30,443 DEBUG quick_subs database passes. 2009-12-16 02:11:30,443 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,443 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,444 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,444 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,444 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,444 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,444 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 01:33:57 2009-12-16 02:11:30,445 DEBUG quick_subs dd0: 342.136435 dd1: 349.065243 2009-12-16 02:11:30,446 INFO quick_subs found line /* 0 n= 146 a_rr001.blk */ 2009/12/09 03:16:28 to 2009/12/09 15:23:40 2009-12-16 02:11:30,446 INFO quick_subs found line /* 1 n= 66 a_rr002.blk */ 2009/12/09 15:28:40 to 2009/12/09 21:39:44 2009-12-16 02:11:30,446 INFO quick_subs found line /* 2 n= 146 a_rr003.blk */ 2009/12/09 21:45:41 to 2009/12/10 09:52:51 2009-12-16 02:11:30,446 INFO quick_subs found line /* 3 n= 75 a_rr004.blk */ 2009/12/10 09:57:53 to 2009/12/10 16:08:55 2009-12-16 02:11:30,446 INFO quick_subs found line /* 4 n= 146 a_rr005.blk */ 2009/12/10 16:14:59 to 2009/12/11 04:22:06 2009-12-16 02:11:30,446 INFO quick_subs found line /* 5 n= 75 a_rr006.blk */ 2009/12/11 04:27:08 to 2009/12/11 10:38:13 2009-12-16 02:11:30,447 INFO quick_subs found line /* 6 n= 146 a_rr007.blk */ 2009/12/11 10:43:26 to 2009/12/11 22:50:32 2009-12-16 02:11:30,447 INFO quick_subs found line /* 7 n= 75 a_rr008.blk */ 2009/12/11 22:55:32 to 2009/12/12 05:06:40 2009-12-16 02:11:30,447 INFO quick_subs found line /* 8 n= 146 a_rr009.blk */ 2009/12/12 05:13:34 to 2009/12/12 17:20:41 2009-12-16 02:11:30,447 INFO quick_subs found line /* 9 n= 75 a_rr010.blk */ 2009/12/12 17:25:41 to 2009/12/12 23:36:45 2009-12-16 02:11:30,447 INFO quick_subs found line /* 10 n= 146 a_rr011.blk */ 2009/12/12 23:42:51 to 2009/12/13 11:50:04 2009-12-16 02:11:30,447 INFO quick_subs found line /* 11 n= 75 a_rr012.blk */ 2009/12/13 11:55:05 to 2009/12/13 18:06:09 2009-12-16 02:11:30,447 INFO quick_subs found line /* 12 n= 146 a_rr013.blk */ 2009/12/13 18:11:23 to 2009/12/14 06:18:33 2009-12-16 02:11:30,448 INFO quick_subs found line /* 13 n= 75 a_rr014.blk */ 2009/12/14 06:23:33 to 2009/12/14 12:34:36 2009-12-16 02:11:30,448 INFO quick_subs found line /* 14 n= 146 a_rr015.blk */ 2009/12/14 12:41:30 to 2009/12/15 00:48:34 2009-12-16 02:11:30,448 INFO quick_subs found line /* 15 n= 75 a_rr016.blk */ 2009/12/15 00:53:35 to 2009/12/15 07:04:46 2009-12-16 02:11:30,448 INFO quick_subs found line /* 16 n= 146 a_rr017.blk */ 2009/12/15 07:10:48 to 2009/12/15 19:15:05 2009-12-16 02:11:30,448 INFO quick_subs found line /* 17 n= 73 a_rr018.blk */ 2009/12/15 19:22:12 to 2009/12/16 01:33:57 2009-12-16 02:11:30,448 INFO quick_subs scan data start at 342.1329282 2009-12-16 02:11:30,448 INFO quick_subs scan time range: 2009/12/09 03:11:25 to 2009/12/16 02:10:19 2009-12-16 02:11:30,449 INFO quick_subs codasdb ends at 349.0652431 (2009/12/16 01:33:57) 2009-12-16 02:11:30,449 DEBUG quick_subs ... changed dirs, in /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,449 DEBUG quick_subs deleting these files: ['a_rr018.blk'] 2009-12-16 02:11:30,449 DEBUG quick_subs getting current (remaining after deletion) database times 2009-12-16 02:11:30,449 DEBUG quick_subs ['adcpdb/a_rr015.blk', 'adcpdb/a_rr002.blk', 'adcpdb/a_rr014.blk', 'adcpdb/a_rr017.blk', 'adcpdb/a_rr009.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr011.blk', 'adcpdb/a_rr012.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr016.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr013.blk', 'adcpdb/a_rr010.blk', 'adcpdb/a_rr008.blk'] 2009-12-16 02:11:30,450 DEBUG quick_subs length is 17 2009-12-16 02:11:30,450 DEBUG quick_subs about to run mkblkdir 2009-12-16 02:11:30,450 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-12-16 02:11:30,450 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-12-16 02:11:30,457 DEBUG quick_subs database passes. 2009-12-16 02:11:30,458 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,458 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,458 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,458 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,458 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,458 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,459 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/15 19:15:05 2009-12-16 02:11:30,459 DEBUG quick_subs dd0: 342.136435 dd1: 348.802141 2009-12-16 02:11:30,459 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,459 DEBUG quick_subs reading time range 2009-12-16 02:11:30,459 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/15 19:15:05 2009-12-16 02:11:30,459 DEBUG quick_subs dd0: 342.136435 dd1: 348.802141 2009-12-16 02:11:30,459 DEBUG quick_subs codas database currently goes from 2009/12/09 03:16:28 to 2009/12/15 19:15:05 2009-12-16 02:11:30,460 DEBUG quick_subs (342.136435 to 348.802141) 2009-12-16 02:11:30,460 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017 2009-12-16 02:11:30,461 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 2009-12-16 02:11:30,461 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017'] 2009-12-16 02:11:30,461 DEBUG quick_subs checked: unloaded blkstrs: ['018', '019'] 2009-12-16 02:11:30,461 DEBUG quick_subs first unloaded file is load/ens_blk018.cmd 2009-12-16 02:11:30,462 DEBUG quick_subs data goes from 2009/12/15 19:22:12 to 2009/12/16 02:10:19 2009-12-16 02:11:30,462 DEBUG quick_subs (348.807083 to 349.090498) 2009-12-16 02:11:30,462 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/RR0916/raw/nb150/rr2009_342_11483.raw /home/data/RR0916/raw/nb150/rr2009_342_14400.raw /home/data/RR0916/raw/nb150/rr2009_342_21600.raw /home/data/RR0916/raw/nb150/rr2009_342_28800.raw /home/data/RR0916/raw/nb150/rr2009_342_36000.raw /home/data/RR0916/raw/nb150/rr2009_342_43200.raw /home/data/RR0916/raw/nb150/rr2009_342_50400.raw /home/data/RR0916/raw/nb150/rr2009_342_57600.raw /home/data/RR0916/raw/nb150/rr2009_342_64800.raw /home/data/RR0916/raw/nb150/rr2009_342_72000.raw /home/data/RR0916/raw/nb150/rr2009_342_79200.raw /home/data/RR0916/raw/nb150/rr2009_343_00000.raw /home/data/RR0916/raw/nb150/rr2009_343_07200.raw /home/data/RR0916/raw/nb150/rr2009_343_14400.raw /home/data/RR0916/raw/nb150/rr2009_343_21600.raw /home/data/RR0916/raw/nb150/rr2009_343_28800.raw /home/data/RR0916/raw/nb150/rr2009_343_36000.raw /home/data/RR0916/raw/nb150/rr2009_343_43200.raw /home/data/RR0916/raw/nb150/rr2009_343_50400.raw /home/data/RR0916/raw/nb150/rr2009_343_57600.raw /home/data/RR0916/raw/nb150/rr2009_343_64800.raw /home/data/RR0916/raw/nb150/rr2009_343_72000.raw /home/data/RR0916/raw/nb150/rr2009_343_79200.raw /home/data/RR0916/raw/nb150/rr2009_344_00000.raw /home/data/RR0916/raw/nb150/rr2009_344_07200.raw /home/data/RR0916/raw/nb150/rr2009_344_14400.raw /home/data/RR0916/raw/nb150/rr2009_344_21600.raw /home/data/RR0916/raw/nb150/rr2009_344_28800.raw /home/data/RR0916/raw/nb150/rr2009_344_36000.raw /home/data/RR0916/raw/nb150/rr2009_344_43200.raw /home/data/RR0916/raw/nb150/rr2009_344_50400.raw /home/data/RR0916/raw/nb150/rr2009_344_57600.raw /home/data/RR0916/raw/nb150/rr2009_344_64800.raw /home/data/RR0916/raw/nb150/rr2009_344_72000.raw /home/data/RR0916/raw/nb150/rr2009_344_79200.raw /home/data/RR0916/raw/nb150/rr2009_345_00000.raw /home/data/RR0916/raw/nb150/rr2009_345_07200.raw /home/data/RR0916/raw/nb150/rr2009_345_14400.raw /home/data/RR0916/raw/nb150/rr2009_345_21600.raw /home/data/RR0916/raw/nb150/rr2009_345_28800.raw /home/data/RR0916/raw/nb150/rr2009_345_36000.raw /home/data/RR0916/raw/nb150/rr2009_345_43200.raw /home/data/RR0916/raw/nb150/rr2009_345_50400.raw /home/data/RR0916/raw/nb150/rr2009_345_57600.raw /home/data/RR0916/raw/nb150/rr2009_345_64800.raw /home/data/RR0916/raw/nb150/rr2009_345_72000.raw /home/data/RR0916/raw/nb150/rr2009_345_79200.raw /home/data/RR0916/raw/nb150/rr2009_346_00000.raw /home/data/RR0916/raw/nb150/rr2009_346_07200.raw /home/data/RR0916/raw/nb150/rr2009_346_14400.raw /home/data/RR0916/raw/nb150/rr2009_346_21600.raw /home/data/RR0916/raw/nb150/rr2009_346_28800.raw /home/data/RR0916/raw/nb150/rr2009_346_36000.raw /home/data/RR0916/raw/nb150/rr2009_346_43200.raw /home/data/RR0916/raw/nb150/rr2009_346_50400.raw /home/data/RR0916/raw/nb150/rr2009_346_57600.raw /home/data/RR0916/raw/nb150/rr2009_346_64800.raw /home/data/RR0916/raw/nb150/rr2009_346_72000.raw /home/data/RR0916/raw/nb150/rr2009_346_79200.raw /home/data/RR0916/raw/nb150/rr2009_347_00000.raw /home/data/RR0916/raw/nb150/rr2009_347_07200.raw /home/data/RR0916/raw/nb150/rr2009_347_14400.raw /home/data/RR0916/raw/nb150/rr2009_347_21600.raw /home/data/RR0916/raw/nb150/rr2009_347_28800.raw /home/data/RR0916/raw/nb150/rr2009_347_36000.raw /home/data/RR0916/raw/nb150/rr2009_347_43200.raw /home/data/RR0916/raw/nb150/rr2009_347_50400.raw /home/data/RR0916/raw/nb150/rr2009_347_57600.raw /home/data/RR0916/raw/nb150/rr2009_347_64800.raw /home/data/RR0916/raw/nb150/rr2009_347_72000.raw /home/data/RR0916/raw/nb150/rr2009_347_79200.raw /home/data/RR0916/raw/nb150/rr2009_348_00000.raw /home/data/RR0916/raw/nb150/rr2009_348_07200.raw /home/data/RR0916/raw/nb150/rr2009_348_14400.raw /home/data/RR0916/raw/nb150/rr2009_348_21600.raw /home/data/RR0916/raw/nb150/rr2009_348_28800.raw /home/data/RR0916/raw/nb150/rr2009_348_36000.raw /home/data/RR0916/raw/nb150/rr2009_348_43200.raw /home/data/RR0916/raw/nb150/rr2009_348_50400.raw /home/data/RR0916/raw/nb150/rr2009_348_57600.raw /home/data/RR0916/raw/nb150/rr2009_348_64800.raw /home/data/RR0916/raw/nb150/rr2009_348_72000.raw /home/data/RR0916/raw/nb150/rr2009_348_79200.raw /home/data/RR0916/raw/nb150/rr2009_349_00000.raw /home/data/RR0916/raw/nb150/rr2009_349_07200.raw 2009-12-16 02:11:30,462 INFO quick_run Wed Dec 16 02:11:30 2009 2009-12-16 02:11:30,462 INFO quick_run about to load uhdas files 2009-12-16 02:11:30,462 INFO quick_run /home/data/RR0916/raw/nb150/rr2009_342_11483.raw /home/data/RR0916/raw/nb150/rr2009_342_14400.raw /home/data/RR0916/raw/nb150/rr2009_342_21600.raw /home/data/RR0916/raw/nb150/rr2009_342_28800.raw /home/data/RR0916/raw/nb150/rr2009_342_36000.raw /home/data/RR0916/raw/nb150/rr2009_342_43200.raw /home/data/RR0916/raw/nb150/rr2009_342_50400.raw /home/data/RR0916/raw/nb150/rr2009_342_57600.raw /home/data/RR0916/raw/nb150/rr2009_342_64800.raw /home/data/RR0916/raw/nb150/rr2009_342_72000.raw /home/data/RR0916/raw/nb150/rr2009_342_79200.raw /home/data/RR0916/raw/nb150/rr2009_343_00000.raw /home/data/RR0916/raw/nb150/rr2009_343_07200.raw /home/data/RR0916/raw/nb150/rr2009_343_14400.raw /home/data/RR0916/raw/nb150/rr2009_343_21600.raw /home/data/RR0916/raw/nb150/rr2009_343_28800.raw /home/data/RR0916/raw/nb150/rr2009_343_36000.raw /home/data/RR0916/raw/nb150/rr2009_343_43200.raw /home/data/RR0916/raw/nb150/rr2009_343_50400.raw /home/data/RR0916/raw/nb150/rr2009_343_57600.raw /home/data/RR0916/raw/nb150/rr2009_343_64800.raw /home/data/RR0916/raw/nb150/rr2009_343_72000.raw /home/data/RR0916/raw/nb150/rr2009_343_79200.raw /home/data/RR0916/raw/nb150/rr2009_344_00000.raw /home/data/RR0916/raw/nb150/rr2009_344_07200.raw /home/data/RR0916/raw/nb150/rr2009_344_14400.raw /home/data/RR0916/raw/nb150/rr2009_344_21600.raw /home/data/RR0916/raw/nb150/rr2009_344_28800.raw /home/data/RR0916/raw/nb150/rr2009_344_36000.raw /home/data/RR0916/raw/nb150/rr2009_344_43200.raw /home/data/RR0916/raw/nb150/rr2009_344_50400.raw /home/data/RR0916/raw/nb150/rr2009_344_57600.raw /home/data/RR0916/raw/nb150/rr2009_344_64800.raw /home/data/RR0916/raw/nb150/rr2009_344_72000.raw /home/data/RR0916/raw/nb150/rr2009_344_79200.raw /home/data/RR0916/raw/nb150/rr2009_345_00000.raw /home/data/RR0916/raw/nb150/rr2009_345_07200.raw /home/data/RR0916/raw/nb150/rr2009_345_14400.raw /home/data/RR0916/raw/nb150/rr2009_345_21600.raw /home/data/RR0916/raw/nb150/rr2009_345_28800.raw /home/data/RR0916/raw/nb150/rr2009_345_36000.raw /home/data/RR0916/raw/nb150/rr2009_345_43200.raw /home/data/RR0916/raw/nb150/rr2009_345_50400.raw /home/data/RR0916/raw/nb150/rr2009_345_57600.raw /home/data/RR0916/raw/nb150/rr2009_345_64800.raw /home/data/RR0916/raw/nb150/rr2009_345_72000.raw /home/data/RR0916/raw/nb150/rr2009_345_79200.raw /home/data/RR0916/raw/nb150/rr2009_346_00000.raw /home/data/RR0916/raw/nb150/rr2009_346_07200.raw /home/data/RR0916/raw/nb150/rr2009_346_14400.raw /home/data/RR0916/raw/nb150/rr2009_346_21600.raw /home/data/RR0916/raw/nb150/rr2009_346_28800.raw /home/data/RR0916/raw/nb150/rr2009_346_36000.raw /home/data/RR0916/raw/nb150/rr2009_346_43200.raw /home/data/RR0916/raw/nb150/rr2009_346_50400.raw /home/data/RR0916/raw/nb150/rr2009_346_57600.raw /home/data/RR0916/raw/nb150/rr2009_346_64800.raw /home/data/RR0916/raw/nb150/rr2009_346_72000.raw /home/data/RR0916/raw/nb150/rr2009_346_79200.raw /home/data/RR0916/raw/nb150/rr2009_347_00000.raw /home/data/RR0916/raw/nb150/rr2009_347_07200.raw /home/data/RR0916/raw/nb150/rr2009_347_14400.raw /home/data/RR0916/raw/nb150/rr2009_347_21600.raw /home/data/RR0916/raw/nb150/rr2009_347_28800.raw /home/data/RR0916/raw/nb150/rr2009_347_36000.raw /home/data/RR0916/raw/nb150/rr2009_347_43200.raw /home/data/RR0916/raw/nb150/rr2009_347_50400.raw /home/data/RR0916/raw/nb150/rr2009_347_57600.raw /home/data/RR0916/raw/nb150/rr2009_347_64800.raw /home/data/RR0916/raw/nb150/rr2009_347_72000.raw /home/data/RR0916/raw/nb150/rr2009_347_79200.raw /home/data/RR0916/raw/nb150/rr2009_348_00000.raw /home/data/RR0916/raw/nb150/rr2009_348_07200.raw /home/data/RR0916/raw/nb150/rr2009_348_14400.raw /home/data/RR0916/raw/nb150/rr2009_348_21600.raw /home/data/RR0916/raw/nb150/rr2009_348_28800.raw /home/data/RR0916/raw/nb150/rr2009_348_36000.raw /home/data/RR0916/raw/nb150/rr2009_348_43200.raw /home/data/RR0916/raw/nb150/rr2009_348_50400.raw /home/data/RR0916/raw/nb150/rr2009_348_57600.raw /home/data/RR0916/raw/nb150/rr2009_348_64800.raw /home/data/RR0916/raw/nb150/rr2009_348_72000.raw /home/data/RR0916/raw/nb150/rr2009_348_79200.raw /home/data/RR0916/raw/nb150/rr2009_349_00000.raw /home/data/RR0916/raw/nb150/rr2009_349_07200.raw 2009-12-16 02:11:30,462 DEBUG quick_setup load/ldcodas.tmp exists 2009-12-16 02:11:30,463 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,463 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/load 2009-12-16 02:11:30,463 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,463 DEBUG quick_subs in /home/data/RR0916/proc/nb150/load 2009-12-16 02:11:30,463 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017'] 2009-12-16 02:11:30,464 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019'] 2009-12-16 02:11:30,464 DEBUG quick_subs starttime is 2009/12/15 19:22:12 2009-12-16 02:11:30,464 DEBUG quick_subs RESETTING thisload_time_range 2009-12-16 02:11:30,464 DEBUG quick_subs time range of data to be loaded: 2009/12/15 19:22:12 to 2009/12/16 02:10:19 2009-12-16 02:11:30,464 DEBUG quick_subs data startdd 348.807083 data enddd 349.090498 2009-12-16 02:11:30,465 DEBUG quick_subs about to load from these cmd files ['ens_blk018.cmd', 'ens_blk019.cmd'] 2009-12-16 02:11:30,465 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_rr DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2009 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk018.cmd ./ens_blk019.cmd 2009-12-16 02:11:30,465 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2009-12-16 02:11:30,490 DEBUG quick_subs removing a_rrdir.blk 2009-12-16 02:11:30,491 DEBUG quick_subs about to run mkblkdir 2009-12-16 02:11:30,491 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-12-16 02:11:30,491 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-12-16 02:11:30,499 DEBUG quick_subs database passes. 2009-12-16 02:11:30,499 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,499 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,499 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,499 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,500 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,500 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,500 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 02:10:01 2009-12-16 02:11:30,500 DEBUG quick_subs dd0: 342.136435 dd1: 349.090289 2009-12-16 02:11:30,500 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-12-16 02:11:30,501 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,501 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,501 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,501 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-12-16 02:11:30,501 DEBUG quick_subs extracting time range 2009-12-16 02:11:30,501 DEBUG quick_subs start_end_time 2009/12/09 03:16:28 to 2009/12/16 02:10:01 2009-12-16 02:11:30,502 DEBUG quick_subs dd0: 342.136435 dd1: 349.090289 2009-12-16 02:11:30,502 DEBUG quick_adcp loaded_time_range is 2009/12/09 03:16:28 to 2009/12/16 02:10:01 2009-12-16 02:11:30,502 DEBUG quick_adcp (342.136435 to 349.090289) 2009-12-16 02:11:30,502 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,502 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/adcpdb 2009-12-16 02:11:30,502 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,502 DEBUG quick_subs dbname: a_rr output: a_rr.cnh time_ranges: all 2009-12-16 02:11:30,503 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2009-12-16 02:11:30,518 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2009-12-16 02:11:30,518 DEBUG quick_run executing commands from /home/data/RR0916/proc/nb150/edit 2009-12-16 02:11:30,518 DEBUG quick_run setup.m exists. not replacing 2009-12-16 02:11:30,518 DEBUG quick_run asetup.m exists. not replacing 2009-12-16 02:11:30,518 DEBUG quick_run aflagit_setup.m exists. not replacing 2009-12-16 02:11:30,519 DEBUG quick_run ------------ step 4: run setflags ------------- 2009-12-16 02:11:30,519 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,519 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/edit 2009-12-16 02:11:30,519 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,519 DEBUG quick_subs dbname: ../adcpdb/a_rr pg_min: 50 set_range_bit time_ranges: all 2009-12-16 02:11:30,519 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-12-16 02:11:30,548 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2009-12-16 02:11:30,548 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,548 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:30,548 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,550 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2009-12-16 02:11:30,550 DEBUG quick_run hcorr_inst is ashtech 2009-12-16 02:11:30,550 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2009-12-16 02:11:30,551 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,551 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/rotate 2009-12-16 02:11:30,551 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,551 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: scn.hdg step_size= 1 year_base= 2009 time_ranges: all 2009-12-16 02:11:30,551 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2009-12-16 02:11:30,572 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:30,573 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/rotate 2009-12-16 02:11:30,573 DEBUG quick_setup running python command "method" 2009-12-16 02:11:30,773 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') hcorfile = 'ens_hcorr.asc'; proc_yearbase = 2009; cruiseid = 'RR0916'; if exist(hcorfile) plot_hcorstats('comment', cruiseid,... 'proc_yearbase', proc_yearbase,... 'plot_ddrange', 1,... 'plottype','fancy',... 'hcorfile', hcorfile,... 'gps_attname', 'ashtech',... 'cruiseid', cruiseid,... 'outfilebase', 'hcorr'); end 2009-12-16 02:11:32,421 DEBUG quick_run ------------ step 7: rotate ------------- 2009-12-16 02:11:32,421 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,421 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/rotate 2009-12-16 02:11:32,421 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,443 DEBUG quick_subs last rotated time from log file: 2009/12/16 01:39:12 2009-12-16 02:11:32,443 DEBUG quick_subs time range of currently loaded data: 2009/12/09 03:16:28 to 2009/12/16 02:10:01 2009-12-16 02:11:32,444 DEBUG quick_subs (342.136435 to 349.090289) 2009-12-16 02:11:32,444 DEBUG quick_setup cal/rotate/rotate.tmp exists 2009-12-16 02:11:32,444 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,445 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/rotate 2009-12-16 02:11:32,445 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,445 DEBUG quick_subs DB_NAME: ../../adcpdb/a_rr LOG_FILE: rotate.log TIME_RANGE: 2009/12/15 19:22:12 to 2009/12/16 02:10:19 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2009 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2009-12-16 02:11:32,445 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2009-12-16 02:11:32,450 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-12-16 02:11:32,450 DEBUG quick_setup nav/as_nav.tmp exists 2009-12-16 02:11:32,450 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,451 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:32,451 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,451 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/12/09 03:16:28 to 2009/12/16 02:10:01 /* the whole time range */ 2009-12-16 02:11:32,451 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-12-16 02:11:32,493 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-12-16 02:11:32,494 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,494 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:32,494 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,494 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-12-16 02:11:32,494 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-12-16 02:11:32,526 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-12-16 02:11:32,527 DEBUG quick_setup nav/smoothr.tmp exists 2009-12-16 02:11:32,527 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,527 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:32,527 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,527 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-12-16 02:11:32,527 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-12-16 02:11:32,704 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:32,704 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:32,704 DEBUG quick_setup running python command "method" 2009-12-16 02:11:32,705 DEBUG call_matlab --> clear all 2009-12-16 02:11:32,734 DEBUG call_matlab <-- >> 2009-12-16 02:11:32,734 DEBUG call_matlab --> close all 2009-12-16 02:11:32,790 DEBUG call_matlab <-- >> 2009-12-16 02:11:32,790 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:32,792 DEBUG call_matlab <-- >> 2009-12-16 02:11:32,792 DEBUG call_matlab --> refsm 2009-12-16 02:11:33,485 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 1985 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2009-12-16 02:11:33,485 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-12-16 02:11:33,485 DEBUG quick_setup nav/putnav.tmp exists 2009-12-16 02:11:33,486 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:33,486 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:33,486 DEBUG quick_setup running python command "method" 2009-12-16 02:11:33,486 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-12-16 02:11:33,486 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-12-16 02:11:33,535 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-12-16 02:11:33,535 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:33,535 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:33,536 DEBUG quick_setup running python command "method" 2009-12-16 02:11:33,536 DEBUG quick_subs Created callrtmp.m 2009-12-16 02:11:33,537 DEBUG call_matlab --> clear all 2009-12-16 02:11:33,543 DEBUG call_matlab <-- >> 2009-12-16 02:11:33,543 DEBUG call_matlab --> close all 2009-12-16 02:11:33,581 DEBUG call_matlab <-- >> 2009-12-16 02:11:33,582 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:33,583 DEBUG call_matlab <-- >> 2009-12-16 02:11:33,584 DEBUG call_matlab --> callrtmp_tmp 2009-12-16 02:11:34,556 DEBUG call_matlab <-- cruise = RR0916 cruise = RR0916 cruise = RR0916 cruise = RR0916 No data available. >> 2009-12-16 02:11:34,557 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2009-12-16 02:11:34,557 DEBUG quick_run find profile flags ------------ *** ------------- 2009-12-16 02:11:34,557 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:34,557 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/edit 2009-12-16 02:11:34,557 DEBUG quick_setup running python command "method" 2009-12-16 02:11:35,483 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2009-12-16 02:11:35,484 DEBUG quick_run starting in: /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,484 DEBUG quick_run executing commands from: edit 2009-12-16 02:11:35,486 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_rr abadprf_tmp.asc 2009-12-16 02:11:35,489 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_rr abadbin_tmp.asc 2009-12-16 02:11:35,496 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_rr 2009-12-16 02:11:35,500 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-12-16 02:11:35,529 DEBUG quick_run changing directories back to /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,529 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2009-12-16 02:11:35,530 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-12-16 02:11:35,530 DEBUG quick_setup nav/as_nav.tmp exists 2009-12-16 02:11:35,530 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,530 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:35,530 DEBUG quick_setup running python command "method" 2009-12-16 02:11:35,530 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/12/09 03:16:28 to 2009/12/16 02:10:01 /* the whole time range */ 2009-12-16 02:11:35,530 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-12-16 02:11:35,573 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-12-16 02:11:35,574 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,574 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:35,574 DEBUG quick_setup running python command "method" 2009-12-16 02:11:35,574 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-12-16 02:11:35,574 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-12-16 02:11:35,606 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-12-16 02:11:35,606 DEBUG quick_setup nav/smoothr.tmp exists 2009-12-16 02:11:35,606 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,606 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:35,607 DEBUG quick_setup running python command "method" 2009-12-16 02:11:35,607 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-12-16 02:11:35,607 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-12-16 02:11:35,776 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:35,776 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:35,776 DEBUG quick_setup running python command "method" 2009-12-16 02:11:35,777 DEBUG call_matlab --> clear all 2009-12-16 02:11:35,787 DEBUG call_matlab <-- >> 2009-12-16 02:11:35,787 DEBUG call_matlab --> close all 2009-12-16 02:11:35,826 DEBUG call_matlab <-- >> 2009-12-16 02:11:35,826 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:35,828 DEBUG call_matlab <-- >> 2009-12-16 02:11:35,828 DEBUG call_matlab --> refsm 2009-12-16 02:11:36,506 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 1985 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2009-12-16 02:11:36,507 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-12-16 02:11:36,507 DEBUG quick_setup nav/putnav.tmp exists 2009-12-16 02:11:36,507 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:36,507 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:36,507 DEBUG quick_setup running python command "method" 2009-12-16 02:11:36,507 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-12-16 02:11:36,508 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-12-16 02:11:36,572 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-12-16 02:11:36,572 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:36,572 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:36,572 DEBUG quick_setup running python command "method" 2009-12-16 02:11:36,573 DEBUG quick_subs Created callrtmp.m 2009-12-16 02:11:36,573 DEBUG call_matlab --> clear all 2009-12-16 02:11:36,579 DEBUG call_matlab <-- >> 2009-12-16 02:11:36,579 DEBUG call_matlab --> close all 2009-12-16 02:11:36,617 DEBUG call_matlab <-- >> 2009-12-16 02:11:36,618 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:36,619 DEBUG call_matlab <-- >> 2009-12-16 02:11:36,619 DEBUG call_matlab --> callrtmp_tmp 2009-12-16 02:11:37,624 DEBUG call_matlab <-- cruise = RR0916 cruise = RR0916 cruise = RR0916 cruise = RR0916 No data available. >> 2009-12-16 02:11:37,624 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2009-12-16 02:11:37,624 DEBUG quick_setup edit/lst_temp.tmp exists 2009-12-16 02:11:37,624 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:37,624 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/edit 2009-12-16 02:11:37,624 DEBUG quick_setup running python command "method" 2009-12-16 02:11:37,625 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr.tem step_size= 1 year_base= 2009 time_ranges: all 2009-12-16 02:11:37,625 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2009-12-16 02:11:37,651 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:37,651 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/edit 2009-12-16 02:11:37,651 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,255 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2009-12-16 02:11:38,255 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2009-12-16 02:11:38,255 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,255 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/botmtrk 2009-12-16 02:11:38,255 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,255 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: a_rr.btm step_size= 1 year_base= 2009 time_ranges: 2009/12/09 03:16:28 to 2009/12/16 02:10:01 /* whole time range */ 2009-12-16 02:11:38,255 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2009-12-16 02:11:38,281 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2009-12-16 02:11:38,282 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,282 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/botmtrk 2009-12-16 02:11:38,282 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,282 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.btm fix_file: ../../nav/a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 60 2009-12-16 02:11:38,282 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2009-12-16 02:11:38,286 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,286 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/botmtrk 2009-12-16 02:11:38,286 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,286 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_rr.ref','a_rr.btm',... 'ADCP RR0916 step size 1 ', 1); 2009-12-16 02:11:38,404 DEBUG quick_setup nav/as_nav.tmp exists 2009-12-16 02:11:38,404 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,404 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/nav 2009-12-16 02:11:38,404 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,404 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/12/09 03:16:28 to 2009/12/16 02:10:01 /* the whole time range */ 2009-12-16 02:11:38,405 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-12-16 02:11:38,450 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2009-12-16 02:11:38,450 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,450 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/watertrk 2009-12-16 02:11:38,450 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,450 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_rr.gps reference_file: ../../nav/a_rr.nav output_file: a_rr_7.cal year_base= 2009 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2009-12-16 02:11:38,451 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2009-12-16 02:11:38,473 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:38,473 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/cal/watertrk 2009-12-16 02:11:38,473 DEBUG quick_setup running python command "method" 2009-12-16 02:11:38,473 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_rr_7.cal', 'ADCP RR0916 7ens') 2009-12-16 02:11:38,474 DEBUG call_matlab --> clear all 2009-12-16 02:11:38,493 DEBUG call_matlab <-- >> 2009-12-16 02:11:38,493 DEBUG call_matlab --> close all 2009-12-16 02:11:38,537 DEBUG call_matlab <-- >> 2009-12-16 02:11:38,537 DEBUG call_matlab --> cd /home/data/RR0916/proc/nb150/cal/watertrk 2009-12-16 02:11:38,539 DEBUG call_matlab <-- >> 2009-12-16 02:11:38,539 DEBUG call_matlab --> calladcpcal_tmp 2009-12-16 02:11:39,328 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [23x11 double] igood: [20x1 double] >> 2009-12-16 02:11:39,328 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2009-12-16 02:11:39,328 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:39,328 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/vector 2009-12-16 02:11:39,328 DEBUG quick_setup running python command "method" 2009-12-16 02:11:39,328 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2009-12-16 02:11:39,333 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:39,333 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/vector 2009-12-16 02:11:39,333 DEBUG quick_setup running python command "method" 2009-12-16 02:11:39,334 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2009-12-16 02:11:39,381 DEBUG quick_asect done making vector matfiles 2009-12-16 02:11:39,381 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:39,381 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/contour 2009-12-16 02:11:39,381 DEBUG quick_setup running python command "method" 2009-12-16 02:11:39,381 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2009-12-16 02:11:39,387 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:39,387 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/contour 2009-12-16 02:11:39,387 DEBUG quick_setup running python command "method" 2009-12-16 02:11:39,388 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2009-12-16 02:11:39,454 DEBUG quick_setup starting in /home/data/RR0916/proc/nb150 2009-12-16 02:11:39,454 DEBUG quick_setup executing commands from /home/data/RR0916/proc/nb150/contour 2009-12-16 02:11:39,454 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_rr 2009-12-16 02:11:39,635 DEBUG quick_asect done running getmat with "allbins" 2009-12-16 02:11:39,635 INFO root copying NOFIG to /home/adcp/www/figures/nb150_hcorr_plot.png 2009-12-16 02:11:39,635 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/nb150_hcorr_plot_thumb.png 2009-12-16 02:11:39,636 DEBUG root matfile is contour/contour_uv.mat 2009-12-16 02:11:39,638 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/nb150_cont_uv.mat 2009-12-16 02:11:39,638 DEBUG root matfile is vector/vector_uv.mat 2009-12-16 02:11:39,638 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/nb150_vect_uv.mat 2009-12-16 02:11:39,638 DEBUG root matfile is contour/contour_xy.mat 2009-12-16 02:11:39,639 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/nb150_cont_xy.mat 2009-12-16 02:11:39,639 DEBUG root matfile is vector/vector_xy.mat 2009-12-16 02:11:39,639 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/nb150_vect_xy.mat 2009-12-16 02:11:39,639 DEBUG root about to copy file edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2009-12-16 02:11:39,640 INFO root copying edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2009-12-16 02:11:39,640 INFO root Ending quick_adcp.py 2009-12-16 02:11:39,700 DEBUG quick_setup killed matlab engine