2009-11-14 17:32:11,169 DEBUG root about to write control file parameters to --yearbase 2009 --pingtype nb --cfgbase RR0914 --cruisename RR0914 --instclass nb --instname nb150 --dbname a_rr --datatype uhdas --datadir /home/data/RR0914/raw/nb150 --cfgpath /home/data/RR0914/proc/nb150/config --ens_len 300 --ping_headcorr --hcorr_inst ashtech --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto 2009-11-14 17:32:11,174 DEBUG quick_adcp progdir = /home/currents/programs 2009-11-14 17:32:11,175 DEBUG quick_adcp binos = lnx 2009-11-14 17:32:11,175 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2009-11-14 17:32:11,175 DEBUG quick_setup yearbase is 2009, proc_yearbase is 2009 2009-11-14 17:32:11,176 DEBUG quick_setup processing data logged with uhdas: 2009-11-14 17:32:11,176 DEBUG quick_setup datatype is uhdas 2009-11-14 17:32:11,176 DEBUG quick_setup pingtype is nb 2009-11-14 17:32:11,176 DEBUG quick_setup instclass is nb 2009-11-14 17:32:11,176 DEBUG quick_setup no post-processing heading correction will be used 2009-11-14 17:32:11,177 DEBUG quick_setup transducer depth set in *_cfg.m file 2009-11-14 17:32:11,177 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'RR0914',... 'cfgpath' , '/home/data/RR0914/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2009-11-14 17:32:11,177 DEBUG quick_setup ------- starting Matlab engine ------- 2009-11-14 17:32:11,177 DEBUG quick_setup ['/home/currents/programs/matlab'] 2009-11-14 17:32:11,182 DEBUG call_matlab starting to wait for initial prompt 2009-11-14 17:32:12,314 DEBUG call_matlab received initial prompt 2009-11-14 17:32:12,473 DEBUG quick_adcp cwd is /home/data/RR0914/proc/nb150 about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-11-14 17:32:12,473 DEBUG quick_adcp original fix file is a_rr.gps 2009-11-14 17:32:12,474 DEBUG quick_adcp smoothed nav file is refsm.sm 2009-11-14 17:32:12,474 DEBUG quick_asect extracting matlab files for nb150, nb pings 2009-11-14 17:32:12,558 DEBUG quick_subs found 41 files using wildcard expansion from "/home/data/RR0914/raw/nb150/*.raw" 2009-11-14 17:32:12,558 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR0914/raw/nb150/rr2009_308_83714.raw /home/data/RR0914/raw/nb150/rr2009_309_00000.raw /home/data/RR0914/raw/nb150/rr2009_309_07200.raw /home/data/RR0914/raw/nb150/rr2009_309_14400.raw /home/data/RR0914/raw/nb150/rr2009_309_21600.raw /home/data/RR0914/raw/nb150/rr2009_309_57542.raw /home/data/RR0914/raw/nb150/rr2009_309_57600.raw /home/data/RR0914/raw/nb150/rr2009_309_64800.raw /home/data/RR0914/raw/nb150/rr2009_309_72000.raw /home/data/RR0914/raw/nb150/rr2009_309_79200.raw /home/data/RR0914/raw/nb150/rr2009_310_00000.raw /home/data/RR0914/raw/nb150/rr2009_310_07200.raw /home/data/RR0914/raw/nb150/rr2009_310_14400.raw /home/data/RR0914/raw/nb150/rr2009_310_21600.raw /home/data/RR0914/raw/nb150/rr2009_310_28800.raw /home/data/RR0914/raw/nb150/rr2009_310_36000.raw /home/data/RR0914/raw/nb150/rr2009_310_43200.raw /home/data/RR0914/raw/nb150/rr2009_310_50400.raw /home/data/RR0914/raw/nb150/rr2009_310_57600.raw /home/data/RR0914/raw/nb150/rr2009_310_64800.raw /home/data/RR0914/raw/nb150/rr2009_310_72000.raw /home/data/RR0914/raw/nb150/rr2009_310_79200.raw /home/data/RR0914/raw/nb150/rr2009_311_41280.raw /home/data/RR0914/raw/nb150/rr2009_311_43200.raw /home/data/RR0914/raw/nb150/rr2009_311_50400.raw /home/data/RR0914/raw/nb150/rr2009_311_57600.raw /home/data/RR0914/raw/nb150/rr2009_311_64800.raw /home/data/RR0914/raw/nb150/rr2009_311_72000.raw /home/data/RR0914/raw/nb150/rr2009_311_79200.raw /home/data/RR0914/raw/nb150/rr2009_312_13035.raw /home/data/RR0914/raw/nb150/rr2009_312_14400.raw /home/data/RR0914/raw/nb150/rr2009_316_82927.raw /home/data/RR0914/raw/nb150/rr2009_317_00000.raw /home/data/RR0914/raw/nb150/rr2009_317_07200.raw /home/data/RR0914/raw/nb150/rr2009_317_14400.raw /home/data/RR0914/raw/nb150/rr2009_317_21600.raw /home/data/RR0914/raw/nb150/rr2009_317_28800.raw /home/data/RR0914/raw/nb150/rr2009_317_36000.raw /home/data/RR0914/raw/nb150/rr2009_317_43200.raw /home/data/RR0914/raw/nb150/rr2009_317_50400.raw /home/data/RR0914/raw/nb150/rr2009_317_57600.raw 2009-11-14 17:32:12,558 DEBUG quick_adcp LASTFILES invoked. using only 41 files from end of filelist 2009-11-14 17:32:12,558 DEBUG quick_adcp using delblks = 1 2009-11-14 17:32:12,558 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/RR0914/raw/nb150/rr2009_308_83714.raw /home/data/RR0914/raw/nb150/rr2009_309_00000.raw /home/data/RR0914/raw/nb150/rr2009_309_07200.raw /home/data/RR0914/raw/nb150/rr2009_309_14400.raw /home/data/RR0914/raw/nb150/rr2009_309_21600.raw /home/data/RR0914/raw/nb150/rr2009_309_57542.raw /home/data/RR0914/raw/nb150/rr2009_309_57600.raw /home/data/RR0914/raw/nb150/rr2009_309_64800.raw /home/data/RR0914/raw/nb150/rr2009_309_72000.raw /home/data/RR0914/raw/nb150/rr2009_309_79200.raw /home/data/RR0914/raw/nb150/rr2009_310_00000.raw /home/data/RR0914/raw/nb150/rr2009_310_07200.raw /home/data/RR0914/raw/nb150/rr2009_310_14400.raw /home/data/RR0914/raw/nb150/rr2009_310_21600.raw /home/data/RR0914/raw/nb150/rr2009_310_28800.raw /home/data/RR0914/raw/nb150/rr2009_310_36000.raw /home/data/RR0914/raw/nb150/rr2009_310_43200.raw /home/data/RR0914/raw/nb150/rr2009_310_50400.raw /home/data/RR0914/raw/nb150/rr2009_310_57600.raw /home/data/RR0914/raw/nb150/rr2009_310_64800.raw /home/data/RR0914/raw/nb150/rr2009_310_72000.raw /home/data/RR0914/raw/nb150/rr2009_310_79200.raw /home/data/RR0914/raw/nb150/rr2009_311_41280.raw /home/data/RR0914/raw/nb150/rr2009_311_43200.raw /home/data/RR0914/raw/nb150/rr2009_311_50400.raw /home/data/RR0914/raw/nb150/rr2009_311_57600.raw /home/data/RR0914/raw/nb150/rr2009_311_64800.raw /home/data/RR0914/raw/nb150/rr2009_311_72000.raw /home/data/RR0914/raw/nb150/rr2009_311_79200.raw /home/data/RR0914/raw/nb150/rr2009_312_13035.raw /home/data/RR0914/raw/nb150/rr2009_312_14400.raw /home/data/RR0914/raw/nb150/rr2009_316_82927.raw /home/data/RR0914/raw/nb150/rr2009_317_00000.raw /home/data/RR0914/raw/nb150/rr2009_317_07200.raw /home/data/RR0914/raw/nb150/rr2009_317_14400.raw /home/data/RR0914/raw/nb150/rr2009_317_21600.raw /home/data/RR0914/raw/nb150/rr2009_317_28800.raw /home/data/RR0914/raw/nb150/rr2009_317_36000.raw /home/data/RR0914/raw/nb150/rr2009_317_43200.raw /home/data/RR0914/raw/nb150/rr2009_317_50400.raw /home/data/RR0914/raw/nb150/rr2009_317_57600.raw 2009-11-14 17:32:12,559 DEBUG quick_adcp Sat Nov 14 17:32:12 2009 running quick_adcp.py as follows: --cntfile /home/data/RR0914/proc/nb150/nb150_qpy.cnt ----- adcpsect variables ------ afilebase a_rr cbasename contour dbname a_rr dbpath ../adcpdb deeper_boundaries [50, 75, 125, 175, 225, 275, 325, 375, 425] firstdepth 21 gridnum 40 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2009 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_rr allow_reload True auto True bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase RR0914 cfgpath /home/data/RR0914/proc/nb150/config cntfile /home/data/RR0914/proc/nb150/nb150_qpy.cnt commands None cruisename RR0914 data_def vmadcp.def datadir /home/data/RR0914/raw/nb150 datafile_glob *.raw datatype uhdas dbname a_rr dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/RR0914/raw/nb150/rr2009_308_83714.raw', '/home/data/RR0914/raw/nb150/rr2009_309_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_309_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_309_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_309_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_309_57542.raw', '/home/data/RR0914/raw/nb150/rr2009_309_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_309_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_309_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_309_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_310_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_310_28800.raw', '/home/data/RR0914/raw/nb150/rr2009_310_36000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_310_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_310_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_310_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_311_41280.raw', '/home/data/RR0914/raw/nb150/rr2009_311_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_311_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_311_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_311_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_311_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_311_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_312_13035.raw', '/home/data/RR0914/raw/nb150/rr2009_312_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_316_82927.raw', '/home/data/RR0914/raw/nb150/rr2009_317_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_317_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_317_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_317_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_317_28800.raw', '/home/data/RR0914/raw/nb150/rr2009_317_36000.raw', '/home/data/RR0914/raw/nb150/rr2009_317_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_317_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_317_57600.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 21 fixfile a_rr.gps hcorr_inst ashtech head_func None help False hidedisplay True howto_lta False howto_ping False instclass nb instname nb150 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'RR0914',... 'cfgpath' , '/home/data/RR0914/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_rr.gps overview False pgmin 50 ping_headcorr True pingtype nb post_headcorr False proc_yearbase 2009 procdir nb150 progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/RR0914/raw/nb150/rr2009_308_83714.raw', '/home/data/RR0914/raw/nb150/rr2009_309_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_309_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_309_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_309_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_309_57542.raw', '/home/data/RR0914/raw/nb150/rr2009_309_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_309_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_309_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_309_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_310_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_310_28800.raw', '/home/data/RR0914/raw/nb150/rr2009_310_36000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_310_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_310_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_310_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_310_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_310_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_311_41280.raw', '/home/data/RR0914/raw/nb150/rr2009_311_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_311_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_311_57600.raw', '/home/data/RR0914/raw/nb150/rr2009_311_64800.raw', '/home/data/RR0914/raw/nb150/rr2009_311_72000.raw', '/home/data/RR0914/raw/nb150/rr2009_311_79200.raw', '/home/data/RR0914/raw/nb150/rr2009_312_13035.raw', '/home/data/RR0914/raw/nb150/rr2009_312_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_316_82927.raw', '/home/data/RR0914/raw/nb150/rr2009_317_00000.raw', '/home/data/RR0914/raw/nb150/rr2009_317_07200.raw', '/home/data/RR0914/raw/nb150/rr2009_317_14400.raw', '/home/data/RR0914/raw/nb150/rr2009_317_21600.raw', '/home/data/RR0914/raw/nb150/rr2009_317_28800.raw', '/home/data/RR0914/raw/nb150/rr2009_317_36000.raw', '/home/data/RR0914/raw/nb150/rr2009_317_43200.raw', '/home/data/RR0914/raw/nb150/rr2009_317_50400.raw', '/home/data/RR0914/raw/nb150/rr2009_317_57600.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2009 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-11-14 17:32:12,560 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2009-11-14 17:32:12,560 DEBUG quick_run scanning files for time ranges... 2009-11-14 17:32:12,560 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150/scan 2009-11-14 17:32:12,560 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/scan 2009-11-14 17:32:12,560 DEBUG quick_setup running python command "method" 2009-11-14 17:32:12,560 DEBUG call_matlab --> clear all 2009-11-14 17:32:12,564 DEBUG call_matlab <-- >> 2009-11-14 17:32:12,564 DEBUG call_matlab --> close all 2009-11-14 17:32:12,603 DEBUG call_matlab <-- >> 2009-11-14 17:32:12,603 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/scan 2009-11-14 17:32:12,605 DEBUG call_matlab <-- >> 2009-11-14 17:32:12,605 DEBUG call_matlab --> scan_tmp 2009-11-14 17:32:13,156 DEBUG call_matlab <-- getting config files from "/home/data/RR0914/proc/nb150/config" running "RR0914_cfg.m" running "RR0914_proc.m" writing scan info to a_rr.scn >> 2009-11-14 17:32:13,157 DEBUG quick_run writing time range from a_rr.scn to a_rr.tr 2009-11-14 17:32:13,157 DEBUG quick_run getting scan time range 2009-11-14 17:32:13,157 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,157 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/scan 2009-11-14 17:32:13,157 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,157 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,158 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,159 DEBUG quick_subs start_end_time 2009/11/05 23:15:16 to 2009/11/14 17:30:46 2009-11-14 17:32:13,159 DEBUG quick_subs dd0: 308.968935 dd1: 317.729699 2009-11-14 17:32:13,159 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,159 DEBUG quick_adcp looking for database with adcpdb/a_rr*.blk 2009-11-14 17:32:13,160 DEBUG quick_adcp database found: listing blocks 2009-11-14 17:32:13,160 DEBUG quick_subs removing a_rrdir.blk 2009-11-14 17:32:13,160 DEBUG quick_subs about to run mkblkdir 2009-11-14 17:32:13,160 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-11-14 17:32:13,160 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-11-14 17:32:13,174 DEBUG quick_subs database passes. 2009-11-14 17:32:13,175 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,175 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,175 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,175 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,175 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,175 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,176 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,176 DEBUG quick_subs dd0: 308.972419 dd1: 317.708600 2009-11-14 17:32:13,176 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,176 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,176 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,176 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,176 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,177 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,177 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,177 DEBUG quick_subs dd0: 308.972419 dd1: 317.708600 2009-11-14 17:32:13,177 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2009-11-14 17:32:13,177 DEBUG quick_adcp origdb_time_range is 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,177 DEBUG quick_adcp (308.972419 to 317.708600) 2009-11-14 17:32:13,177 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2009-11-14 17:32:13,178 DEBUG quick_subs getting current (remaining after deletion) database times 2009-11-14 17:32:13,178 DEBUG quick_subs ['adcpdb/a_rr002.blk', 'adcpdb/a_rr009.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rrdir.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr008.blk'] 2009-11-14 17:32:13,178 DEBUG quick_subs length is 10 2009-11-14 17:32:13,178 DEBUG quick_subs removing a_rrdir.blk 2009-11-14 17:32:13,178 DEBUG quick_subs about to run mkblkdir 2009-11-14 17:32:13,178 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-11-14 17:32:13,179 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-11-14 17:32:13,198 DEBUG quick_subs database passes. 2009-11-14 17:32:13,199 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,199 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,199 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,199 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,199 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,199 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,200 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,200 DEBUG quick_subs dd0: 308.972419 dd1: 317.708600 2009-11-14 17:32:13,200 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,200 DEBUG quick_subs reading time range 2009-11-14 17:32:13,200 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,200 DEBUG quick_subs dd0: 308.972419 dd1: 317.708600 2009-11-14 17:32:13,201 INFO quick_subs Sat Nov 14 17:32:13 2009 2009-11-14 17:32:13,201 INFO quick_subs checking database time range by listblk 2009-11-14 17:32:13,201 DEBUG quick_subs removing a_rrdir.blk 2009-11-14 17:32:13,201 DEBUG quick_subs about to run mkblkdir 2009-11-14 17:32:13,201 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-11-14 17:32:13,201 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-11-14 17:32:13,212 DEBUG quick_subs database passes. 2009-11-14 17:32:13,212 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,212 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,212 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,212 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,213 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,213 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,213 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:00:23 2009-11-14 17:32:13,213 DEBUG quick_subs dd0: 308.972419 dd1: 317.708600 2009-11-14 17:32:13,214 INFO quick_subs found line /* 0 n= 97 a_rr001.blk */ 2009/11/05 23:20:17 to 2009/11/06 07:20:52 2009-11-14 17:32:13,215 INFO quick_subs found line /* 1 n= 146 a_rr002.blk */ 2009/11/06 16:04:05 to 2009/11/07 04:11:12 2009-11-14 17:32:13,215 INFO quick_subs found line /* 2 n= 75 a_rr003.blk */ 2009/11/07 04:16:12 to 2009/11/07 10:27:17 2009-11-14 17:32:13,215 INFO quick_subs found line /* 3 n= 146 a_rr004.blk */ 2009/11/07 10:33:23 to 2009/11/07 22:39:48 2009-11-14 17:32:13,215 INFO quick_subs found line /* 4 n= 3 a_rr005.blk */ 2009/11/07 22:44:49 to 2009/11/07 22:54:51 2009-11-14 17:32:13,215 INFO quick_subs found line /* 5 n= 128 a_rr006.blk */ 2009/11/08 11:33:03 to 2009/11/08 22:09:53 2009-11-14 17:32:13,215 INFO quick_subs found line /* 6 n= 13 a_rr007.blk */ 2009/11/09 03:42:18 to 2009/11/09 04:41:33 2009-11-14 17:32:13,215 INFO quick_subs found line /* 7 n= 146 a_rr008.blk */ 2009/11/13 23:07:10 to 2009/11/14 11:14:20 2009-11-14 17:32:13,215 INFO quick_subs found line /* 8 n= 69 a_rr009.blk */ 2009/11/14 11:19:22 to 2009/11/14 17:00:23 2009-11-14 17:32:13,216 INFO quick_subs scan data start at 308.9689352 2009-11-14 17:32:13,216 INFO quick_subs scan time range: 2009/11/05 23:15:16 to 2009/11/14 17:30:46 2009-11-14 17:32:13,216 INFO quick_subs codasdb ends at 317.7085995 (2009/11/14 17:00:23) 2009-11-14 17:32:13,216 DEBUG quick_subs ... changed dirs, in /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,216 DEBUG quick_subs deleting these files: ['a_rr009.blk'] 2009-11-14 17:32:13,217 DEBUG quick_subs getting current (remaining after deletion) database times 2009-11-14 17:32:13,217 DEBUG quick_subs ['adcpdb/a_rr002.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr008.blk'] 2009-11-14 17:32:13,217 DEBUG quick_subs length is 8 2009-11-14 17:32:13,217 DEBUG quick_subs about to run mkblkdir 2009-11-14 17:32:13,217 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-11-14 17:32:13,217 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-11-14 17:32:13,228 DEBUG quick_subs database passes. 2009-11-14 17:32:13,228 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,229 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,229 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,229 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,229 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,229 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,229 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 11:14:20 2009-11-14 17:32:13,230 DEBUG quick_subs dd0: 308.972419 dd1: 317.468287 2009-11-14 17:32:13,230 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,233 DEBUG quick_subs reading time range 2009-11-14 17:32:13,233 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 11:14:20 2009-11-14 17:32:13,233 DEBUG quick_subs dd0: 308.972419 dd1: 317.468287 2009-11-14 17:32:13,233 DEBUG quick_subs codas database currently goes from 2009/11/05 23:20:17 to 2009/11/14 11:14:20 2009-11-14 17:32:13,233 DEBUG quick_subs (308.972419 to 317.468287) 2009-11-14 17:32:13,234 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008 2009-11-14 17:32:13,234 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 2009-11-14 17:32:13,235 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008'] 2009-11-14 17:32:13,235 DEBUG quick_subs checked: unloaded blkstrs: ['009'] 2009-11-14 17:32:13,235 DEBUG quick_subs first unloaded file is load/ens_blk009.cmd 2009-11-14 17:32:13,235 DEBUG quick_subs data goes from 2009/11/14 11:19:22 to 2009/11/14 17:30:46 2009-11-14 17:32:13,236 DEBUG quick_subs (317.471782 to 317.729699) 2009-11-14 17:32:13,236 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/RR0914/raw/nb150/rr2009_308_83714.raw /home/data/RR0914/raw/nb150/rr2009_309_00000.raw /home/data/RR0914/raw/nb150/rr2009_309_07200.raw /home/data/RR0914/raw/nb150/rr2009_309_14400.raw /home/data/RR0914/raw/nb150/rr2009_309_21600.raw /home/data/RR0914/raw/nb150/rr2009_309_57542.raw /home/data/RR0914/raw/nb150/rr2009_309_57600.raw /home/data/RR0914/raw/nb150/rr2009_309_64800.raw /home/data/RR0914/raw/nb150/rr2009_309_72000.raw /home/data/RR0914/raw/nb150/rr2009_309_79200.raw /home/data/RR0914/raw/nb150/rr2009_310_00000.raw /home/data/RR0914/raw/nb150/rr2009_310_07200.raw /home/data/RR0914/raw/nb150/rr2009_310_14400.raw /home/data/RR0914/raw/nb150/rr2009_310_21600.raw /home/data/RR0914/raw/nb150/rr2009_310_28800.raw /home/data/RR0914/raw/nb150/rr2009_310_36000.raw /home/data/RR0914/raw/nb150/rr2009_310_43200.raw /home/data/RR0914/raw/nb150/rr2009_310_50400.raw /home/data/RR0914/raw/nb150/rr2009_310_57600.raw /home/data/RR0914/raw/nb150/rr2009_310_64800.raw /home/data/RR0914/raw/nb150/rr2009_310_72000.raw /home/data/RR0914/raw/nb150/rr2009_310_79200.raw /home/data/RR0914/raw/nb150/rr2009_311_41280.raw /home/data/RR0914/raw/nb150/rr2009_311_43200.raw /home/data/RR0914/raw/nb150/rr2009_311_50400.raw /home/data/RR0914/raw/nb150/rr2009_311_57600.raw /home/data/RR0914/raw/nb150/rr2009_311_64800.raw /home/data/RR0914/raw/nb150/rr2009_311_72000.raw /home/data/RR0914/raw/nb150/rr2009_311_79200.raw /home/data/RR0914/raw/nb150/rr2009_312_13035.raw /home/data/RR0914/raw/nb150/rr2009_312_14400.raw /home/data/RR0914/raw/nb150/rr2009_316_82927.raw /home/data/RR0914/raw/nb150/rr2009_317_00000.raw /home/data/RR0914/raw/nb150/rr2009_317_07200.raw /home/data/RR0914/raw/nb150/rr2009_317_14400.raw /home/data/RR0914/raw/nb150/rr2009_317_21600.raw /home/data/RR0914/raw/nb150/rr2009_317_28800.raw /home/data/RR0914/raw/nb150/rr2009_317_36000.raw /home/data/RR0914/raw/nb150/rr2009_317_43200.raw /home/data/RR0914/raw/nb150/rr2009_317_50400.raw /home/data/RR0914/raw/nb150/rr2009_317_57600.raw 2009-11-14 17:32:13,236 INFO quick_run Sat Nov 14 17:32:13 2009 2009-11-14 17:32:13,236 INFO quick_run about to load uhdas files 2009-11-14 17:32:13,236 INFO quick_run /home/data/RR0914/raw/nb150/rr2009_308_83714.raw /home/data/RR0914/raw/nb150/rr2009_309_00000.raw /home/data/RR0914/raw/nb150/rr2009_309_07200.raw /home/data/RR0914/raw/nb150/rr2009_309_14400.raw /home/data/RR0914/raw/nb150/rr2009_309_21600.raw /home/data/RR0914/raw/nb150/rr2009_309_57542.raw /home/data/RR0914/raw/nb150/rr2009_309_57600.raw /home/data/RR0914/raw/nb150/rr2009_309_64800.raw /home/data/RR0914/raw/nb150/rr2009_309_72000.raw /home/data/RR0914/raw/nb150/rr2009_309_79200.raw /home/data/RR0914/raw/nb150/rr2009_310_00000.raw /home/data/RR0914/raw/nb150/rr2009_310_07200.raw /home/data/RR0914/raw/nb150/rr2009_310_14400.raw /home/data/RR0914/raw/nb150/rr2009_310_21600.raw /home/data/RR0914/raw/nb150/rr2009_310_28800.raw /home/data/RR0914/raw/nb150/rr2009_310_36000.raw /home/data/RR0914/raw/nb150/rr2009_310_43200.raw /home/data/RR0914/raw/nb150/rr2009_310_50400.raw /home/data/RR0914/raw/nb150/rr2009_310_57600.raw /home/data/RR0914/raw/nb150/rr2009_310_64800.raw /home/data/RR0914/raw/nb150/rr2009_310_72000.raw /home/data/RR0914/raw/nb150/rr2009_310_79200.raw /home/data/RR0914/raw/nb150/rr2009_311_41280.raw /home/data/RR0914/raw/nb150/rr2009_311_43200.raw /home/data/RR0914/raw/nb150/rr2009_311_50400.raw /home/data/RR0914/raw/nb150/rr2009_311_57600.raw /home/data/RR0914/raw/nb150/rr2009_311_64800.raw /home/data/RR0914/raw/nb150/rr2009_311_72000.raw /home/data/RR0914/raw/nb150/rr2009_311_79200.raw /home/data/RR0914/raw/nb150/rr2009_312_13035.raw /home/data/RR0914/raw/nb150/rr2009_312_14400.raw /home/data/RR0914/raw/nb150/rr2009_316_82927.raw /home/data/RR0914/raw/nb150/rr2009_317_00000.raw /home/data/RR0914/raw/nb150/rr2009_317_07200.raw /home/data/RR0914/raw/nb150/rr2009_317_14400.raw /home/data/RR0914/raw/nb150/rr2009_317_21600.raw /home/data/RR0914/raw/nb150/rr2009_317_28800.raw /home/data/RR0914/raw/nb150/rr2009_317_36000.raw /home/data/RR0914/raw/nb150/rr2009_317_43200.raw /home/data/RR0914/raw/nb150/rr2009_317_50400.raw /home/data/RR0914/raw/nb150/rr2009_317_57600.raw 2009-11-14 17:32:13,236 DEBUG quick_setup load/ldcodas.tmp exists 2009-11-14 17:32:13,236 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,236 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/load 2009-11-14 17:32:13,236 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,237 DEBUG quick_subs in /home/data/RR0914/proc/nb150/load 2009-11-14 17:32:13,237 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008'] 2009-11-14 17:32:13,237 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009'] 2009-11-14 17:32:13,238 DEBUG quick_subs starttime is 2009/11/14 11:19:22 2009-11-14 17:32:13,238 DEBUG quick_subs RESETTING thisload_time_range 2009-11-14 17:32:13,238 DEBUG quick_subs time range of data to be loaded: 2009/11/14 11:19:22 to 2009/11/14 17:30:46 2009-11-14 17:32:13,238 DEBUG quick_subs data startdd 317.471782 data enddd 317.729699 2009-11-14 17:32:13,238 DEBUG quick_subs about to load from these cmd files ['ens_blk009.cmd'] 2009-11-14 17:32:13,238 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_rr DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2009 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk009.cmd 2009-11-14 17:32:13,238 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2009-11-14 17:32:13,258 DEBUG quick_subs removing a_rrdir.blk 2009-11-14 17:32:13,259 DEBUG quick_subs about to run mkblkdir 2009-11-14 17:32:13,259 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-11-14 17:32:13,259 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-11-14 17:32:13,290 DEBUG quick_subs database passes. 2009-11-14 17:32:13,290 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,291 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,291 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,291 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,291 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,291 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,291 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:30:29 2009-11-14 17:32:13,292 DEBUG quick_subs dd0: 308.972419 dd1: 317.729502 2009-11-14 17:32:13,292 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2009-11-14 17:32:13,292 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,292 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,292 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,292 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-11-14 17:32:13,292 DEBUG quick_subs extracting time range 2009-11-14 17:32:13,293 DEBUG quick_subs start_end_time 2009/11/05 23:20:17 to 2009/11/14 17:30:29 2009-11-14 17:32:13,293 DEBUG quick_subs dd0: 308.972419 dd1: 317.729502 2009-11-14 17:32:13,293 DEBUG quick_adcp loaded_time_range is 2009/11/05 23:20:17 to 2009/11/14 17:30:29 2009-11-14 17:32:13,293 DEBUG quick_adcp (308.972419 to 317.729502) 2009-11-14 17:32:13,293 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,293 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/adcpdb 2009-11-14 17:32:13,293 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,293 DEBUG quick_subs dbname: a_rr output: a_rr.cnh time_ranges: all 2009-11-14 17:32:13,294 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2009-11-14 17:32:13,306 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2009-11-14 17:32:13,306 DEBUG quick_run executing commands from /home/data/RR0914/proc/nb150/edit 2009-11-14 17:32:13,307 DEBUG quick_run setup.m exists. not replacing 2009-11-14 17:32:13,307 DEBUG quick_run asetup.m exists. not replacing 2009-11-14 17:32:13,307 DEBUG quick_run aflagit_setup.m exists. not replacing 2009-11-14 17:32:13,307 DEBUG quick_run ------------ step 4: run setflags ------------- 2009-11-14 17:32:13,307 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,307 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/edit 2009-11-14 17:32:13,307 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,307 DEBUG quick_subs dbname: ../adcpdb/a_rr pg_min: 50 set_range_bit time_ranges: all 2009-11-14 17:32:13,308 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-11-14 17:32:13,322 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2009-11-14 17:32:13,322 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,322 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:13,322 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,324 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2009-11-14 17:32:13,324 DEBUG quick_run hcorr_inst is ashtech 2009-11-14 17:32:13,324 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2009-11-14 17:32:13,324 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,324 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/rotate 2009-11-14 17:32:13,324 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,324 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: scn.hdg step_size= 1 year_base= 2009 time_ranges: all 2009-11-14 17:32:13,325 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2009-11-14 17:32:13,335 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:13,336 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/rotate 2009-11-14 17:32:13,336 DEBUG quick_setup running python command "method" 2009-11-14 17:32:13,497 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') hcorfile = 'ens_hcorr.asc'; proc_yearbase = 2009; cruiseid = 'RR0914'; if exist(hcorfile) plot_hcorstats('comment', cruiseid,... 'proc_yearbase', proc_yearbase,... 'plot_ddrange', 1,... 'plottype','fancy',... 'hcorfile', hcorfile,... 'gps_attname', 'ashtech',... 'cruiseid', cruiseid,... 'outfilebase', 'hcorr'); end 2009-11-14 17:32:15,083 DEBUG quick_run ------------ step 7: rotate ------------- 2009-11-14 17:32:15,083 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,083 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/rotate 2009-11-14 17:32:15,083 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,091 DEBUG quick_subs last rotated time from log file: 2009/11/14 17:00:41 2009-11-14 17:32:15,091 DEBUG quick_subs time range of currently loaded data: 2009/11/05 23:20:17 to 2009/11/14 17:30:29 2009-11-14 17:32:15,092 DEBUG quick_subs (308.972419 to 317.729502) 2009-11-14 17:32:15,092 DEBUG quick_setup cal/rotate/rotate.tmp exists 2009-11-14 17:32:15,092 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,092 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/rotate 2009-11-14 17:32:15,092 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,092 DEBUG quick_subs DB_NAME: ../../adcpdb/a_rr LOG_FILE: rotate.log TIME_RANGE: 2009/11/14 11:19:22 to 2009/11/14 17:30:46 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2009 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2009-11-14 17:32:15,093 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2009-11-14 17:32:15,097 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-11-14 17:32:15,097 DEBUG quick_setup nav/as_nav.tmp exists 2009-11-14 17:32:15,098 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,098 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,098 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,098 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/11/05 23:20:17 to 2009/11/14 17:30:29 /* the whole time range */ 2009-11-14 17:32:15,098 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-11-14 17:32:15,118 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-11-14 17:32:15,118 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,118 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,119 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,119 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-11-14 17:32:15,119 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-11-14 17:32:15,134 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-11-14 17:32:15,134 DEBUG quick_setup nav/smoothr.tmp exists 2009-11-14 17:32:15,135 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,135 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,135 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,135 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-11-14 17:32:15,135 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-11-14 17:32:15,207 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,207 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,207 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,207 DEBUG call_matlab --> clear all 2009-11-14 17:32:15,237 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,237 DEBUG call_matlab --> close all 2009-11-14 17:32:15,293 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,293 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,295 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,295 DEBUG call_matlab --> refsm 2009-11-14 17:32:15,647 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 829 profiles, 20 bins INFO: database closed loading getmat output >> 2009-11-14 17:32:15,647 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-11-14 17:32:15,647 DEBUG quick_setup nav/putnav.tmp exists 2009-11-14 17:32:15,647 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,647 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,648 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,648 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-11-14 17:32:15,648 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-11-14 17:32:15,670 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-11-14 17:32:15,670 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:15,670 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,670 DEBUG quick_setup running python command "method" 2009-11-14 17:32:15,671 DEBUG quick_subs Created callrtmp.m 2009-11-14 17:32:15,671 DEBUG call_matlab --> clear all 2009-11-14 17:32:15,677 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,678 DEBUG call_matlab --> close all 2009-11-14 17:32:15,715 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,716 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:15,718 DEBUG call_matlab <-- >> 2009-11-14 17:32:15,718 DEBUG call_matlab --> callrtmp_tmp 2009-11-14 17:32:16,695 DEBUG call_matlab <-- cruise = RR0914 cruise = RR0914 cruise = RR0914 No data available. cruise = RR0914 No data available. >> 2009-11-14 17:32:16,695 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2009-11-14 17:32:16,696 DEBUG quick_run find profile flags ------------ *** ------------- 2009-11-14 17:32:16,696 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:16,696 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/edit 2009-11-14 17:32:16,696 DEBUG quick_setup running python command "method" 2009-11-14 17:32:17,620 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2009-11-14 17:32:17,621 DEBUG quick_run starting in: /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,621 DEBUG quick_run executing commands from: edit 2009-11-14 17:32:17,623 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_rr abadprf_tmp.asc 2009-11-14 17:32:17,626 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_rr abadbin_tmp.asc 2009-11-14 17:32:17,631 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_rr 2009-11-14 17:32:17,648 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-11-14 17:32:17,664 DEBUG quick_run changing directories back to /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,664 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2009-11-14 17:32:17,664 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-11-14 17:32:17,664 DEBUG quick_setup nav/as_nav.tmp exists 2009-11-14 17:32:17,664 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,665 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:17,665 DEBUG quick_setup running python command "method" 2009-11-14 17:32:17,665 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/11/05 23:20:17 to 2009/11/14 17:30:29 /* the whole time range */ 2009-11-14 17:32:17,665 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-11-14 17:32:17,690 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-11-14 17:32:17,690 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,690 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:17,691 DEBUG quick_setup running python command "method" 2009-11-14 17:32:17,691 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-11-14 17:32:17,691 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-11-14 17:32:17,706 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-11-14 17:32:17,706 DEBUG quick_setup nav/smoothr.tmp exists 2009-11-14 17:32:17,707 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,707 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:17,707 DEBUG quick_setup running python command "method" 2009-11-14 17:32:17,707 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-11-14 17:32:17,707 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-11-14 17:32:17,776 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:17,776 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:17,776 DEBUG quick_setup running python command "method" 2009-11-14 17:32:17,776 DEBUG call_matlab --> clear all 2009-11-14 17:32:17,787 DEBUG call_matlab <-- >> 2009-11-14 17:32:17,787 DEBUG call_matlab --> close all 2009-11-14 17:32:17,826 DEBUG call_matlab <-- >> 2009-11-14 17:32:17,826 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:17,828 DEBUG call_matlab <-- >> 2009-11-14 17:32:17,828 DEBUG call_matlab --> refsm 2009-11-14 17:32:18,173 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 829 profiles, 20 bins INFO: database closed loading getmat output >> 2009-11-14 17:32:18,173 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-11-14 17:32:18,173 DEBUG quick_setup nav/putnav.tmp exists 2009-11-14 17:32:18,173 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:18,173 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:18,173 DEBUG quick_setup running python command "method" 2009-11-14 17:32:18,174 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-11-14 17:32:18,174 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-11-14 17:32:18,196 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2009-11-14 17:32:18,196 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:18,197 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:18,197 DEBUG quick_setup running python command "method" 2009-11-14 17:32:18,197 DEBUG quick_subs Created callrtmp.m 2009-11-14 17:32:18,198 DEBUG call_matlab --> clear all 2009-11-14 17:32:18,204 DEBUG call_matlab <-- >> 2009-11-14 17:32:18,204 DEBUG call_matlab --> close all 2009-11-14 17:32:18,243 DEBUG call_matlab <-- >> 2009-11-14 17:32:18,243 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:18,245 DEBUG call_matlab <-- >> 2009-11-14 17:32:18,245 DEBUG call_matlab --> callrtmp_tmp 2009-11-14 17:32:19,223 DEBUG call_matlab <-- cruise = RR0914 cruise = RR0914 cruise = RR0914 No data available. cruise = RR0914 No data available. >> 2009-11-14 17:32:19,223 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2009-11-14 17:32:19,223 DEBUG quick_setup edit/lst_temp.tmp exists 2009-11-14 17:32:19,223 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,223 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/edit 2009-11-14 17:32:19,223 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,223 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr.tem step_size= 1 year_base= 2009 time_ranges: all 2009-11-14 17:32:19,224 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2009-11-14 17:32:19,237 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,237 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/edit 2009-11-14 17:32:19,237 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,838 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2009-11-14 17:32:19,839 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2009-11-14 17:32:19,839 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,839 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/botmtrk 2009-11-14 17:32:19,839 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,839 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: a_rr.btm step_size= 1 year_base= 2009 time_ranges: 2009/11/05 23:20:17 to 2009/11/14 17:30:29 /* whole time range */ 2009-11-14 17:32:19,839 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2009-11-14 17:32:19,846 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2009-11-14 17:32:19,846 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,846 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/botmtrk 2009-11-14 17:32:19,846 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,847 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.btm fix_file: ../../nav/a_rr.gps output: a_rr.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 60 2009-11-14 17:32:19,847 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2009-11-14 17:32:19,850 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,850 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/botmtrk 2009-11-14 17:32:19,851 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,851 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_rr.ref','a_rr.btm',... 'ADCP RR0914 step size 1 ', 1); 2009-11-14 17:32:19,968 DEBUG quick_setup nav/as_nav.tmp exists 2009-11-14 17:32:19,968 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,968 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/nav 2009-11-14 17:32:19,968 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,968 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/11/05 23:20:17 to 2009/11/14 17:30:29 /* the whole time range */ 2009-11-14 17:32:19,969 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-11-14 17:32:19,989 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2009-11-14 17:32:19,989 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,990 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/watertrk 2009-11-14 17:32:19,990 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,990 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_rr.gps reference_file: ../../nav/a_rr.nav output_file: a_rr_7.cal year_base= 2009 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2009-11-14 17:32:19,990 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2009-11-14 17:32:19,998 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:19,998 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/cal/watertrk 2009-11-14 17:32:19,998 DEBUG quick_setup running python command "method" 2009-11-14 17:32:19,998 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_rr_7.cal', 'ADCP RR0914 7ens') 2009-11-14 17:32:19,998 DEBUG call_matlab --> clear all 2009-11-14 17:32:20,003 DEBUG call_matlab <-- >> 2009-11-14 17:32:20,003 DEBUG call_matlab --> close all 2009-11-14 17:32:20,041 DEBUG call_matlab <-- >> 2009-11-14 17:32:20,041 DEBUG call_matlab --> cd /home/data/RR0914/proc/nb150/cal/watertrk 2009-11-14 17:32:20,043 DEBUG call_matlab <-- >> 2009-11-14 17:32:20,043 DEBUG call_matlab --> calladcpcal_tmp 2009-11-14 17:32:20,829 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [5x11 double] igood: [3x1 double] >> 2009-11-14 17:32:20,829 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2009-11-14 17:32:20,829 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:20,830 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/vector 2009-11-14 17:32:20,830 DEBUG quick_setup running python command "method" 2009-11-14 17:32:20,830 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2009-11-14 17:32:20,834 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:20,834 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/vector 2009-11-14 17:32:20,834 DEBUG quick_setup running python command "method" 2009-11-14 17:32:20,835 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2009-11-14 17:32:20,859 DEBUG quick_asect done making vector matfiles 2009-11-14 17:32:20,860 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:20,860 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/contour 2009-11-14 17:32:20,860 DEBUG quick_setup running python command "method" 2009-11-14 17:32:20,860 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2009-11-14 17:32:20,866 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:20,866 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/contour 2009-11-14 17:32:20,866 DEBUG quick_setup running python command "method" 2009-11-14 17:32:20,867 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2009-11-14 17:32:20,907 DEBUG quick_setup starting in /home/data/RR0914/proc/nb150 2009-11-14 17:32:20,907 DEBUG quick_setup executing commands from /home/data/RR0914/proc/nb150/contour 2009-11-14 17:32:20,908 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_rr 2009-11-14 17:32:20,991 DEBUG quick_asect done running getmat with "allbins" 2009-11-14 17:32:20,992 INFO root copying NOFIG to /home/adcp/www/figures/nb150_hcorr_plot.png 2009-11-14 17:32:20,992 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/nb150_hcorr_plot_thumb.png 2009-11-14 17:32:20,992 DEBUG root matfile is contour/contour_uv.mat 2009-11-14 17:32:20,995 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/nb150_cont_uv.mat 2009-11-14 17:32:20,995 DEBUG root matfile is vector/vector_uv.mat 2009-11-14 17:32:20,996 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/nb150_vect_uv.mat 2009-11-14 17:32:20,996 DEBUG root matfile is contour/contour_xy.mat 2009-11-14 17:32:20,996 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/nb150_cont_xy.mat 2009-11-14 17:32:20,996 DEBUG root matfile is vector/vector_xy.mat 2009-11-14 17:32:20,996 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/nb150_vect_xy.mat 2009-11-14 17:32:20,997 DEBUG root about to copy file edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2009-11-14 17:32:20,997 INFO root copying edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2009-11-14 17:32:20,997 INFO root Ending quick_adcp.py 2009-11-14 17:32:21,105 DEBUG quick_setup killed matlab engine