2010-03-31 10:44:30,622 DEBUG root about to write control file parameters to --yearbase 2010 --pingtype nb --cfgbase RR1004 --cruisename RR1004 --instclass nb --instname nb150 --dbname a_rr --datatype uhdas --datadir /home/data/RR1004/raw/nb150 --cfgpath /home/data/RR1004/proc/nb150/config --ens_len 300 --ping_headcorr --hcorr_inst ashtech --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto 2010-03-31 10:44:30,627 DEBUG quick_adcp progdir = /home/currents/programs 2010-03-31 10:44:30,627 DEBUG quick_adcp binos = lnx 2010-03-31 10:44:30,627 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2010-03-31 10:44:30,628 DEBUG quick_setup yearbase is 2010, proc_yearbase is 2010 2010-03-31 10:44:30,628 DEBUG quick_setup processing data logged with uhdas: 2010-03-31 10:44:30,628 DEBUG quick_setup datatype is uhdas 2010-03-31 10:44:30,628 DEBUG quick_setup pingtype is nb 2010-03-31 10:44:30,629 DEBUG quick_setup instclass is nb 2010-03-31 10:44:30,629 DEBUG quick_setup no post-processing heading correction will be used 2010-03-31 10:44:30,629 DEBUG quick_setup transducer depth set in *_cfg.m file 2010-03-31 10:44:30,629 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'RR1004',... 'cfgpath' , '/home/data/RR1004/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2010-03-31 10:44:30,629 DEBUG quick_setup ------- starting Matlab engine ------- 2010-03-31 10:44:30,630 DEBUG quick_setup ['/home/currents/programs/matlab'] 2010-03-31 10:44:30,634 DEBUG call_matlab starting to wait for initial prompt 2010-03-31 10:44:31,408 DEBUG call_matlab received initial prompt 2010-03-31 10:44:31,561 DEBUG quick_adcp cwd is /home/data/RR1004/proc/nb150 about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-03-31 10:44:31,561 DEBUG quick_adcp original fix file is a_rr.gps 2010-03-31 10:44:31,562 DEBUG quick_adcp smoothed nav file is refsm.sm 2010-03-31 10:44:31,562 DEBUG quick_asect extracting matlab files for nb150, nb pings 2010-03-31 10:44:31,660 DEBUG quick_subs found 119 files using wildcard expansion from "/home/data/RR1004/raw/nb150/*.raw" 2010-03-31 10:44:31,660 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/RR1004/raw/nb150/rr2010_079_54868.raw /home/data/RR1004/raw/nb150/rr2010_079_57600.raw /home/data/RR1004/raw/nb150/rr2010_079_64800.raw /home/data/RR1004/raw/nb150/rr2010_079_72000.raw /home/data/RR1004/raw/nb150/rr2010_079_79200.raw /home/data/RR1004/raw/nb150/rr2010_080_00000.raw /home/data/RR1004/raw/nb150/rr2010_080_07200.raw /home/data/RR1004/raw/nb150/rr2010_080_14400.raw /home/data/RR1004/raw/nb150/rr2010_080_21600.raw /home/data/RR1004/raw/nb150/rr2010_080_28800.raw /home/data/RR1004/raw/nb150/rr2010_080_36000.raw /home/data/RR1004/raw/nb150/rr2010_080_43200.raw /home/data/RR1004/raw/nb150/rr2010_080_50400.raw /home/data/RR1004/raw/nb150/rr2010_080_57600.raw /home/data/RR1004/raw/nb150/rr2010_080_64800.raw /home/data/RR1004/raw/nb150/rr2010_080_72000.raw /home/data/RR1004/raw/nb150/rr2010_080_79200.raw /home/data/RR1004/raw/nb150/rr2010_081_00000.raw /home/data/RR1004/raw/nb150/rr2010_081_07200.raw /home/data/RR1004/raw/nb150/rr2010_081_14400.raw /home/data/RR1004/raw/nb150/rr2010_081_21600.raw /home/data/RR1004/raw/nb150/rr2010_081_28800.raw /home/data/RR1004/raw/nb150/rr2010_081_36000.raw /home/data/RR1004/raw/nb150/rr2010_081_43200.raw /home/data/RR1004/raw/nb150/rr2010_081_50400.raw /home/data/RR1004/raw/nb150/rr2010_081_57600.raw /home/data/RR1004/raw/nb150/rr2010_081_64800.raw /home/data/RR1004/raw/nb150/rr2010_081_72000.raw /home/data/RR1004/raw/nb150/rr2010_081_79200.raw /home/data/RR1004/raw/nb150/rr2010_082_00000.raw /home/data/RR1004/raw/nb150/rr2010_082_07200.raw /home/data/RR1004/raw/nb150/rr2010_082_14400.raw /home/data/RR1004/raw/nb150/rr2010_082_21600.raw /home/data/RR1004/raw/nb150/rr2010_082_28800.raw /home/data/RR1004/raw/nb150/rr2010_082_36000.raw /home/data/RR1004/raw/nb150/rr2010_082_43200.raw /home/data/RR1004/raw/nb150/rr2010_082_50400.raw /home/data/RR1004/raw/nb150/rr2010_082_57600.raw /home/data/RR1004/raw/nb150/rr2010_082_64800.raw /home/data/RR1004/raw/nb150/rr2010_082_72000.raw /home/data/RR1004/raw/nb150/rr2010_082_79200.raw /home/data/RR1004/raw/nb150/rr2010_083_00000.raw /home/data/RR1004/raw/nb150/rr2010_083_07200.raw /home/data/RR1004/raw/nb150/rr2010_083_14400.raw /home/data/RR1004/raw/nb150/rr2010_083_21600.raw /home/data/RR1004/raw/nb150/rr2010_083_28800.raw /home/data/RR1004/raw/nb150/rr2010_083_36000.raw /home/data/RR1004/raw/nb150/rr2010_083_43200.raw /home/data/RR1004/raw/nb150/rr2010_083_50400.raw /home/data/RR1004/raw/nb150/rr2010_083_57600.raw /home/data/RR1004/raw/nb150/rr2010_083_64800.raw /home/data/RR1004/raw/nb150/rr2010_083_72000.raw /home/data/RR1004/raw/nb150/rr2010_083_79200.raw /home/data/RR1004/raw/nb150/rr2010_084_00000.raw /home/data/RR1004/raw/nb150/rr2010_084_07200.raw /home/data/RR1004/raw/nb150/rr2010_084_14400.raw /home/data/RR1004/raw/nb150/rr2010_084_21600.raw /home/data/RR1004/raw/nb150/rr2010_084_28800.raw /home/data/RR1004/raw/nb150/rr2010_084_36000.raw /home/data/RR1004/raw/nb150/rr2010_084_43200.raw /home/data/RR1004/raw/nb150/rr2010_084_50400.raw /home/data/RR1004/raw/nb150/rr2010_084_57600.raw /home/data/RR1004/raw/nb150/rr2010_084_64800.raw /home/data/RR1004/raw/nb150/rr2010_084_72000.raw /home/data/RR1004/raw/nb150/rr2010_084_79200.raw /home/data/RR1004/raw/nb150/rr2010_085_00000.raw /home/data/RR1004/raw/nb150/rr2010_085_07200.raw /home/data/RR1004/raw/nb150/rr2010_085_14400.raw /home/data/RR1004/raw/nb150/rr2010_085_21600.raw /home/data/RR1004/raw/nb150/rr2010_085_28800.raw /home/data/RR1004/raw/nb150/rr2010_085_36000.raw /home/data/RR1004/raw/nb150/rr2010_085_43200.raw /home/data/RR1004/raw/nb150/rr2010_085_50400.raw /home/data/RR1004/raw/nb150/rr2010_085_57600.raw /home/data/RR1004/raw/nb150/rr2010_085_64800.raw /home/data/RR1004/raw/nb150/rr2010_085_72000.raw /home/data/RR1004/raw/nb150/rr2010_085_79200.raw /home/data/RR1004/raw/nb150/rr2010_086_00000.raw /home/data/RR1004/raw/nb150/rr2010_086_07200.raw /home/data/RR1004/raw/nb150/rr2010_086_14400.raw /home/data/RR1004/raw/nb150/rr2010_086_21600.raw /home/data/RR1004/raw/nb150/rr2010_086_28800.raw /home/data/RR1004/raw/nb150/rr2010_086_36000.raw /home/data/RR1004/raw/nb150/rr2010_086_43200.raw /home/data/RR1004/raw/nb150/rr2010_086_50400.raw /home/data/RR1004/raw/nb150/rr2010_086_57600.raw /home/data/RR1004/raw/nb150/rr2010_086_64800.raw /home/data/RR1004/raw/nb150/rr2010_086_72000.raw /home/data/RR1004/raw/nb150/rr2010_086_79200.raw /home/data/RR1004/raw/nb150/rr2010_087_00000.raw /home/data/RR1004/raw/nb150/rr2010_087_07200.raw /home/data/RR1004/raw/nb150/rr2010_087_14400.raw /home/data/RR1004/raw/nb150/rr2010_087_21600.raw /home/data/RR1004/raw/nb150/rr2010_087_28800.raw /home/data/RR1004/raw/nb150/rr2010_087_36000.raw /home/data/RR1004/raw/nb150/rr2010_087_43200.raw /home/data/RR1004/raw/nb150/rr2010_087_50400.raw /home/data/RR1004/raw/nb150/rr2010_087_57600.raw /home/data/RR1004/raw/nb150/rr2010_087_64800.raw /home/data/RR1004/raw/nb150/rr2010_087_72000.raw /home/data/RR1004/raw/nb150/rr2010_087_79200.raw /home/data/RR1004/raw/nb150/rr2010_088_00000.raw /home/data/RR1004/raw/nb150/rr2010_088_07200.raw /home/data/RR1004/raw/nb150/rr2010_088_14400.raw /home/data/RR1004/raw/nb150/rr2010_088_21600.raw /home/data/RR1004/raw/nb150/rr2010_088_28800.raw /home/data/RR1004/raw/nb150/rr2010_088_36000.raw /home/data/RR1004/raw/nb150/rr2010_088_43200.raw /home/data/RR1004/raw/nb150/rr2010_088_50400.raw /home/data/RR1004/raw/nb150/rr2010_088_57600.raw /home/data/RR1004/raw/nb150/rr2010_088_64800.raw /home/data/RR1004/raw/nb150/rr2010_088_72000.raw /home/data/RR1004/raw/nb150/rr2010_088_79200.raw /home/data/RR1004/raw/nb150/rr2010_089_00000.raw /home/data/RR1004/raw/nb150/rr2010_089_07200.raw /home/data/RR1004/raw/nb150/rr2010_089_14400.raw /home/data/RR1004/raw/nb150/rr2010_089_21600.raw /home/data/RR1004/raw/nb150/rr2010_089_28800.raw /home/data/RR1004/raw/nb150/rr2010_089_36000.raw 2010-03-31 10:44:31,661 DEBUG quick_adcp LASTFILES invoked. using only 119 files from end of filelist 2010-03-31 10:44:31,661 DEBUG quick_adcp using delblks = 1 2010-03-31 10:44:31,661 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/RR1004/raw/nb150/rr2010_079_54868.raw /home/data/RR1004/raw/nb150/rr2010_079_57600.raw /home/data/RR1004/raw/nb150/rr2010_079_64800.raw /home/data/RR1004/raw/nb150/rr2010_079_72000.raw /home/data/RR1004/raw/nb150/rr2010_079_79200.raw /home/data/RR1004/raw/nb150/rr2010_080_00000.raw /home/data/RR1004/raw/nb150/rr2010_080_07200.raw /home/data/RR1004/raw/nb150/rr2010_080_14400.raw /home/data/RR1004/raw/nb150/rr2010_080_21600.raw /home/data/RR1004/raw/nb150/rr2010_080_28800.raw /home/data/RR1004/raw/nb150/rr2010_080_36000.raw /home/data/RR1004/raw/nb150/rr2010_080_43200.raw /home/data/RR1004/raw/nb150/rr2010_080_50400.raw /home/data/RR1004/raw/nb150/rr2010_080_57600.raw /home/data/RR1004/raw/nb150/rr2010_080_64800.raw /home/data/RR1004/raw/nb150/rr2010_080_72000.raw /home/data/RR1004/raw/nb150/rr2010_080_79200.raw /home/data/RR1004/raw/nb150/rr2010_081_00000.raw /home/data/RR1004/raw/nb150/rr2010_081_07200.raw /home/data/RR1004/raw/nb150/rr2010_081_14400.raw /home/data/RR1004/raw/nb150/rr2010_081_21600.raw /home/data/RR1004/raw/nb150/rr2010_081_28800.raw /home/data/RR1004/raw/nb150/rr2010_081_36000.raw /home/data/RR1004/raw/nb150/rr2010_081_43200.raw /home/data/RR1004/raw/nb150/rr2010_081_50400.raw /home/data/RR1004/raw/nb150/rr2010_081_57600.raw /home/data/RR1004/raw/nb150/rr2010_081_64800.raw /home/data/RR1004/raw/nb150/rr2010_081_72000.raw /home/data/RR1004/raw/nb150/rr2010_081_79200.raw /home/data/RR1004/raw/nb150/rr2010_082_00000.raw /home/data/RR1004/raw/nb150/rr2010_082_07200.raw /home/data/RR1004/raw/nb150/rr2010_082_14400.raw /home/data/RR1004/raw/nb150/rr2010_082_21600.raw /home/data/RR1004/raw/nb150/rr2010_082_28800.raw /home/data/RR1004/raw/nb150/rr2010_082_36000.raw /home/data/RR1004/raw/nb150/rr2010_082_43200.raw /home/data/RR1004/raw/nb150/rr2010_082_50400.raw /home/data/RR1004/raw/nb150/rr2010_082_57600.raw /home/data/RR1004/raw/nb150/rr2010_082_64800.raw /home/data/RR1004/raw/nb150/rr2010_082_72000.raw /home/data/RR1004/raw/nb150/rr2010_082_79200.raw /home/data/RR1004/raw/nb150/rr2010_083_00000.raw /home/data/RR1004/raw/nb150/rr2010_083_07200.raw /home/data/RR1004/raw/nb150/rr2010_083_14400.raw /home/data/RR1004/raw/nb150/rr2010_083_21600.raw /home/data/RR1004/raw/nb150/rr2010_083_28800.raw /home/data/RR1004/raw/nb150/rr2010_083_36000.raw /home/data/RR1004/raw/nb150/rr2010_083_43200.raw /home/data/RR1004/raw/nb150/rr2010_083_50400.raw /home/data/RR1004/raw/nb150/rr2010_083_57600.raw /home/data/RR1004/raw/nb150/rr2010_083_64800.raw /home/data/RR1004/raw/nb150/rr2010_083_72000.raw /home/data/RR1004/raw/nb150/rr2010_083_79200.raw /home/data/RR1004/raw/nb150/rr2010_084_00000.raw /home/data/RR1004/raw/nb150/rr2010_084_07200.raw /home/data/RR1004/raw/nb150/rr2010_084_14400.raw /home/data/RR1004/raw/nb150/rr2010_084_21600.raw /home/data/RR1004/raw/nb150/rr2010_084_28800.raw /home/data/RR1004/raw/nb150/rr2010_084_36000.raw /home/data/RR1004/raw/nb150/rr2010_084_43200.raw /home/data/RR1004/raw/nb150/rr2010_084_50400.raw /home/data/RR1004/raw/nb150/rr2010_084_57600.raw /home/data/RR1004/raw/nb150/rr2010_084_64800.raw /home/data/RR1004/raw/nb150/rr2010_084_72000.raw /home/data/RR1004/raw/nb150/rr2010_084_79200.raw /home/data/RR1004/raw/nb150/rr2010_085_00000.raw /home/data/RR1004/raw/nb150/rr2010_085_07200.raw /home/data/RR1004/raw/nb150/rr2010_085_14400.raw /home/data/RR1004/raw/nb150/rr2010_085_21600.raw /home/data/RR1004/raw/nb150/rr2010_085_28800.raw /home/data/RR1004/raw/nb150/rr2010_085_36000.raw /home/data/RR1004/raw/nb150/rr2010_085_43200.raw /home/data/RR1004/raw/nb150/rr2010_085_50400.raw /home/data/RR1004/raw/nb150/rr2010_085_57600.raw /home/data/RR1004/raw/nb150/rr2010_085_64800.raw /home/data/RR1004/raw/nb150/rr2010_085_72000.raw /home/data/RR1004/raw/nb150/rr2010_085_79200.raw /home/data/RR1004/raw/nb150/rr2010_086_00000.raw /home/data/RR1004/raw/nb150/rr2010_086_07200.raw /home/data/RR1004/raw/nb150/rr2010_086_14400.raw /home/data/RR1004/raw/nb150/rr2010_086_21600.raw /home/data/RR1004/raw/nb150/rr2010_086_28800.raw /home/data/RR1004/raw/nb150/rr2010_086_36000.raw /home/data/RR1004/raw/nb150/rr2010_086_43200.raw /home/data/RR1004/raw/nb150/rr2010_086_50400.raw /home/data/RR1004/raw/nb150/rr2010_086_57600.raw /home/data/RR1004/raw/nb150/rr2010_086_64800.raw /home/data/RR1004/raw/nb150/rr2010_086_72000.raw /home/data/RR1004/raw/nb150/rr2010_086_79200.raw /home/data/RR1004/raw/nb150/rr2010_087_00000.raw /home/data/RR1004/raw/nb150/rr2010_087_07200.raw /home/data/RR1004/raw/nb150/rr2010_087_14400.raw /home/data/RR1004/raw/nb150/rr2010_087_21600.raw /home/data/RR1004/raw/nb150/rr2010_087_28800.raw /home/data/RR1004/raw/nb150/rr2010_087_36000.raw /home/data/RR1004/raw/nb150/rr2010_087_43200.raw /home/data/RR1004/raw/nb150/rr2010_087_50400.raw /home/data/RR1004/raw/nb150/rr2010_087_57600.raw /home/data/RR1004/raw/nb150/rr2010_087_64800.raw /home/data/RR1004/raw/nb150/rr2010_087_72000.raw /home/data/RR1004/raw/nb150/rr2010_087_79200.raw /home/data/RR1004/raw/nb150/rr2010_088_00000.raw /home/data/RR1004/raw/nb150/rr2010_088_07200.raw /home/data/RR1004/raw/nb150/rr2010_088_14400.raw /home/data/RR1004/raw/nb150/rr2010_088_21600.raw /home/data/RR1004/raw/nb150/rr2010_088_28800.raw /home/data/RR1004/raw/nb150/rr2010_088_36000.raw /home/data/RR1004/raw/nb150/rr2010_088_43200.raw /home/data/RR1004/raw/nb150/rr2010_088_50400.raw /home/data/RR1004/raw/nb150/rr2010_088_57600.raw /home/data/RR1004/raw/nb150/rr2010_088_64800.raw /home/data/RR1004/raw/nb150/rr2010_088_72000.raw /home/data/RR1004/raw/nb150/rr2010_088_79200.raw /home/data/RR1004/raw/nb150/rr2010_089_00000.raw /home/data/RR1004/raw/nb150/rr2010_089_07200.raw /home/data/RR1004/raw/nb150/rr2010_089_14400.raw /home/data/RR1004/raw/nb150/rr2010_089_21600.raw /home/data/RR1004/raw/nb150/rr2010_089_28800.raw /home/data/RR1004/raw/nb150/rr2010_089_36000.raw 2010-03-31 10:44:31,662 DEBUG quick_adcp Wed Mar 31 10:44:31 2010 running quick_adcp.py as follows: --cntfile /home/data/RR1004/proc/nb150/nb150_qpy.cnt ----- adcpsect variables ------ afilebase a_rr cbasename contour dbname a_rr dbpath ../adcpdb deeper_boundaries [50, 75, 125, 175, 225, 275, 325, 375, 425] firstdepth 21 gridnum 40 increment 10 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2010 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.065 adjust_time 1 afilebase a_rr allow_reload True auto True bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 1 cfgbase RR1004 cfgpath /home/data/RR1004/proc/nb150/config cntfile /home/data/RR1004/proc/nb150/nb150_qpy.cnt commands None cruisename RR1004 data_def vmadcp.def datadir /home/data/RR1004/raw/nb150 datafile_glob *.raw datatype uhdas dbname a_rr dday_bailout None debug False delblks 1 diarystr %% no diary written %% displaystr set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') ducer_depth 0 editcfg_file override_editcfg enddday_file None ens_halign None ens_len 300 ensgyrorbin False expert None filelist ['/home/data/RR1004/raw/nb150/rr2010_079_54868.raw', '/home/data/RR1004/raw/nb150/rr2010_079_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_079_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_079_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_079_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_080_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_080_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_080_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_080_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_080_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_080_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_081_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_081_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_081_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_081_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_081_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_081_57600.raw', 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'/home/data/RR1004/raw/nb150/rr2010_083_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_083_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_083_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_083_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_083_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_083_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_083_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_083_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_084_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_084_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_084_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_084_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_084_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_084_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_084_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_084_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_084_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_084_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_084_72000.raw', 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'/home/data/RR1004/raw/nb150/rr2010_088_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_088_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_088_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_088_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_088_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_088_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_088_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_088_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_088_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_088_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_088_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_089_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_089_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_089_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_089_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_089_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_089_36000.raw'] filter_hwidth 0.0208 find_pflags True firstdepth 21 fixfile a_rr.gps hcorr_inst ashtech head_func None help False hidedisplay True howto_lta False howto_ping False instclass nb instname nb150 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = nb; instname = 'nb150'; pingtype = 'nb'; proc_yearbase = 2010; yearbase = 2010; cfg =get_uhdascfg('cfgbase' , 'RR1004',... 'cfgpath' , '/home/data/RR1004/proc/nb150/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 nosave_editcfg 0 num_persistence 24 numbins 128 orig_fixfile a_rr.gps overview False pgmin 50 ping_headcorr True pingtype nb post_headcorr False proc_yearbase 2010 procdir nb150 progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/RR1004/raw/nb150/rr2010_079_54868.raw', '/home/data/RR1004/raw/nb150/rr2010_079_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_079_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_079_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_079_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_080_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_080_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_080_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_080_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_080_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_080_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_080_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_080_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_081_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_081_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_081_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_081_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_081_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_081_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_081_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_081_64800.raw', 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'/home/data/RR1004/raw/nb150/rr2010_086_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_086_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_086_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_086_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_086_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_087_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_087_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_087_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_087_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_087_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_087_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_087_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_087_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_087_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_087_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_087_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_087_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_088_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_088_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_088_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_088_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_088_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_088_36000.raw', '/home/data/RR1004/raw/nb150/rr2010_088_43200.raw', '/home/data/RR1004/raw/nb150/rr2010_088_50400.raw', '/home/data/RR1004/raw/nb150/rr2010_088_57600.raw', '/home/data/RR1004/raw/nb150/rr2010_088_64800.raw', '/home/data/RR1004/raw/nb150/rr2010_088_72000.raw', '/home/data/RR1004/raw/nb150/rr2010_088_79200.raw', '/home/data/RR1004/raw/nb150/rr2010_089_00000.raw', '/home/data/RR1004/raw/nb150/rr2010_089_07200.raw', '/home/data/RR1004/raw/nb150/rr2010_089_14400.raw', '/home/data/RR1004/raw/nb150/rr2010_089_21600.raw', '/home/data/RR1004/raw/nb150/rr2010_089_28800.raw', '/home/data/RR1004/raw/nb150/rr2010_089_36000.raw'] setup_info False skip_avg True smfile refsm.sm steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_matplotlib False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2010 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2010-03-31 10:44:31,663 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2010-03-31 10:44:31,663 DEBUG quick_run scanning files for time ranges... 2010-03-31 10:44:31,663 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150/scan 2010-03-31 10:44:31,663 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/scan 2010-03-31 10:44:31,663 DEBUG quick_setup running python command "method" 2010-03-31 10:44:31,663 DEBUG call_matlab --> clear all 2010-03-31 10:44:31,667 DEBUG call_matlab <-- >> 2010-03-31 10:44:31,667 DEBUG call_matlab --> close all 2010-03-31 10:44:31,705 DEBUG call_matlab <-- >> 2010-03-31 10:44:31,705 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/scan 2010-03-31 10:44:31,707 DEBUG call_matlab <-- >> 2010-03-31 10:44:31,707 DEBUG call_matlab --> scan_tmp 2010-03-31 10:44:32,250 DEBUG call_matlab <-- getting config files from "/home/data/RR1004/proc/nb150/config" running "RR1004_cfg.m" running "RR1004_proc.m" writing scan info to a_rr.scn >> 2010-03-31 10:44:32,251 DEBUG quick_run writing time range from a_rr.scn to a_rr.tr 2010-03-31 10:44:32,251 DEBUG quick_run getting scan time range 2010-03-31 10:44:32,251 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,251 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/scan 2010-03-31 10:44:32,251 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,251 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,252 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,253 DEBUG quick_subs start_end_time 2010/03/21 15:14:30 to 2010/03/31 10:42:46 2010-03-31 10:44:32,253 DEBUG quick_subs dd0: 79.635069 dd1: 89.446366 2010-03-31 10:44:32,253 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,253 DEBUG quick_adcp looking for database with adcpdb/a_rr*.blk 2010-03-31 10:44:32,254 DEBUG quick_adcp database found: listing blocks 2010-03-31 10:44:32,254 DEBUG quick_subs removing a_rrdir.blk 2010-03-31 10:44:32,254 DEBUG quick_subs about to run mkblkdir 2010-03-31 10:44:32,254 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-03-31 10:44:32,255 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-03-31 10:44:32,263 DEBUG quick_subs database passes. 2010-03-31 10:44:32,264 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,264 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,264 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,264 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,264 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,265 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,265 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,265 DEBUG quick_subs dd0: 79.638553 dd1: 89.425255 2010-03-31 10:44:32,265 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,265 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,266 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,266 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,266 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,266 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,266 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,266 DEBUG quick_subs dd0: 79.638553 dd1: 89.425255 2010-03-31 10:44:32,267 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2010-03-31 10:44:32,267 DEBUG quick_adcp origdb_time_range is 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,267 DEBUG quick_adcp (79.638553 to 89.425255) 2010-03-31 10:44:32,267 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2010-03-31 10:44:32,267 DEBUG quick_subs getting current (remaining after deletion) database times 2010-03-31 10:44:32,268 DEBUG quick_subs ['adcpdb/a_rr015.blk', 'adcpdb/a_rr002.blk', 'adcpdb/a_rr014.blk', 'adcpdb/a_rr026.blk', 'adcpdb/a_rr017.blk', 'adcpdb/a_rr025.blk', 'adcpdb/a_rr009.blk', 'adcpdb/a_rr019.blk', 'adcpdb/a_rr022.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr011.blk', 'adcpdb/a_rr012.blk', 'adcpdb/a_rr024.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr023.blk', 'adcpdb/a_rr016.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rrdir.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr013.blk', 'adcpdb/a_rr010.blk', 'adcpdb/a_rr008.blk', 'adcpdb/a_rr018.blk', 'adcpdb/a_rr021.blk', 'adcpdb/a_rr020.blk'] 2010-03-31 10:44:32,268 DEBUG quick_subs length is 27 2010-03-31 10:44:32,268 DEBUG quick_subs removing a_rrdir.blk 2010-03-31 10:44:32,268 DEBUG quick_subs about to run mkblkdir 2010-03-31 10:44:32,268 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-03-31 10:44:32,268 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-03-31 10:44:32,276 DEBUG quick_subs database passes. 2010-03-31 10:44:32,277 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,277 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,277 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,277 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,277 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,278 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,278 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,278 DEBUG quick_subs dd0: 79.638553 dd1: 89.425255 2010-03-31 10:44:32,278 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,278 DEBUG quick_subs reading time range 2010-03-31 10:44:32,278 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,279 DEBUG quick_subs dd0: 79.638553 dd1: 89.425255 2010-03-31 10:44:32,279 INFO quick_subs Wed Mar 31 10:44:32 2010 2010-03-31 10:44:32,279 INFO quick_subs checking database time range by listblk 2010-03-31 10:44:32,279 DEBUG quick_subs removing a_rrdir.blk 2010-03-31 10:44:32,279 DEBUG quick_subs about to run mkblkdir 2010-03-31 10:44:32,280 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-03-31 10:44:32,280 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-03-31 10:44:32,288 DEBUG quick_subs database passes. 2010-03-31 10:44:32,288 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,288 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,288 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,288 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,289 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,289 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,289 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:12:22 2010-03-31 10:44:32,289 DEBUG quick_subs dd0: 79.638553 dd1: 89.425255 2010-03-31 10:44:32,291 INFO quick_subs found line /* 0 n= 146 a_rr001.blk */ 2010/03/21 15:19:31 to 2010/03/22 03:31:44 2010-03-31 10:44:32,291 INFO quick_subs found line /* 1 n= 74 a_rr002.blk */ 2010/03/22 03:36:44 to 2010/03/22 09:42:47 2010-03-31 10:44:32,291 INFO quick_subs found line /* 2 n= 146 a_rr003.blk */ 2010/03/22 09:48:41 to 2010/03/22 21:55:46 2010-03-31 10:44:32,291 INFO quick_subs found line /* 3 n= 75 a_rr004.blk */ 2010/03/22 22:00:47 to 2010/03/23 04:11:52 2010-03-31 10:44:32,291 INFO quick_subs found line /* 4 n= 146 a_rr005.blk */ 2010/03/23 04:17:55 to 2010/03/23 16:24:24 2010-03-31 10:44:32,291 INFO quick_subs found line /* 5 n= 75 a_rr006.blk */ 2010/03/23 16:29:24 to 2010/03/23 22:40:28 2010-03-31 10:44:32,291 INFO quick_subs found line /* 6 n= 146 a_rr007.blk */ 2010/03/23 22:47:08 to 2010/03/24 10:54:21 2010-03-31 10:44:32,291 INFO quick_subs found line /* 7 n= 75 a_rr008.blk */ 2010/03/24 10:59:22 to 2010/03/24 17:10:29 2010-03-31 10:44:32,292 INFO quick_subs found line /* 8 n= 146 a_rr009.blk */ 2010/03/24 17:16:23 to 2010/03/25 05:23:32 2010-03-31 10:44:32,292 INFO quick_subs found line /* 9 n= 75 a_rr010.blk */ 2010/03/25 05:28:33 to 2010/03/25 11:39:37 2010-03-31 10:44:32,292 INFO quick_subs found line /* 10 n= 146 a_rr011.blk */ 2010/03/25 11:45:36 to 2010/03/25 23:52:44 2010-03-31 10:44:32,292 INFO quick_subs found line /* 11 n= 75 a_rr012.blk */ 2010/03/25 23:57:45 to 2010/03/26 06:08:49 2010-03-31 10:44:32,292 INFO quick_subs found line /* 12 n= 146 a_rr013.blk */ 2010/03/26 06:14:03 to 2010/03/26 18:21:13 2010-03-31 10:44:32,292 INFO quick_subs found line /* 13 n= 75 a_rr014.blk */ 2010/03/26 18:26:14 to 2010/03/27 00:37:18 2010-03-31 10:44:32,292 INFO quick_subs found line /* 14 n= 146 a_rr015.blk */ 2010/03/27 00:44:02 to 2010/03/27 12:56:09 2010-03-31 10:44:32,293 INFO quick_subs found line /* 15 n= 74 a_rr016.blk */ 2010/03/27 13:01:11 to 2010/03/27 19:07:20 2010-03-31 10:44:32,293 INFO quick_subs found line /* 16 n= 146 a_rr017.blk */ 2010/03/27 19:13:11 to 2010/03/28 07:20:19 2010-03-31 10:44:32,293 INFO quick_subs found line /* 17 n= 75 a_rr018.blk */ 2010/03/28 07:25:19 to 2010/03/28 13:36:23 2010-03-31 10:44:32,293 INFO quick_subs found line /* 18 n= 146 a_rr019.blk */ 2010/03/28 13:42:25 to 2010/03/29 01:49:30 2010-03-31 10:44:32,293 INFO quick_subs found line /* 19 n= 75 a_rr020.blk */ 2010/03/29 01:54:31 to 2010/03/29 08:05:34 2010-03-31 10:44:32,293 INFO quick_subs found line /* 20 n= 146 a_rr021.blk */ 2010/03/29 08:10:48 to 2010/03/29 20:17:56 2010-03-31 10:44:32,293 INFO quick_subs found line /* 21 n= 75 a_rr022.blk */ 2010/03/29 20:22:56 to 2010/03/30 02:34:03 2010-03-31 10:44:32,293 INFO quick_subs found line /* 22 n= 146 a_rr023.blk */ 2010/03/30 02:40:47 to 2010/03/30 14:47:53 2010-03-31 10:44:32,294 INFO quick_subs found line /* 23 n= 75 a_rr024.blk */ 2010/03/30 14:52:54 to 2010/03/30 21:03:58 2010-03-31 10:44:32,294 INFO quick_subs found line /* 24 n= 146 a_rr025.blk */ 2010/03/30 21:10:00 to 2010/03/31 09:17:12 2010-03-31 10:44:32,294 INFO quick_subs found line /* 25 n= 11 a_rr026.blk */ 2010/03/31 09:22:12 to 2010/03/31 10:12:22 2010-03-31 10:44:32,294 INFO quick_subs scan data start at 79.6350694 2010-03-31 10:44:32,294 INFO quick_subs scan time range: 2010/03/21 15:14:30 to 2010/03/31 10:42:46 2010-03-31 10:44:32,294 INFO quick_subs codasdb ends at 89.4252546 (2010/03/31 10:12:22) 2010-03-31 10:44:32,294 DEBUG quick_subs ... changed dirs, in /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,295 DEBUG quick_subs deleting these files: ['a_rr026.blk'] 2010-03-31 10:44:32,295 DEBUG quick_subs getting current (remaining after deletion) database times 2010-03-31 10:44:32,295 DEBUG quick_subs ['adcpdb/a_rr015.blk', 'adcpdb/a_rr002.blk', 'adcpdb/a_rr014.blk', 'adcpdb/a_rr017.blk', 'adcpdb/a_rr025.blk', 'adcpdb/a_rr009.blk', 'adcpdb/a_rr019.blk', 'adcpdb/a_rr022.blk', 'adcpdb/a_rr004.blk', 'adcpdb/a_rr011.blk', 'adcpdb/a_rr012.blk', 'adcpdb/a_rr024.blk', 'adcpdb/a_rr005.blk', 'adcpdb/a_rr006.blk', 'adcpdb/a_rr001.blk', 'adcpdb/a_rr023.blk', 'adcpdb/a_rr016.blk', 'adcpdb/a_rr003.blk', 'adcpdb/a_rr007.blk', 'adcpdb/a_rr013.blk', 'adcpdb/a_rr010.blk', 'adcpdb/a_rr008.blk', 'adcpdb/a_rr018.blk', 'adcpdb/a_rr021.blk', 'adcpdb/a_rr020.blk'] 2010-03-31 10:44:32,295 DEBUG quick_subs length is 25 2010-03-31 10:44:32,296 DEBUG quick_subs about to run mkblkdir 2010-03-31 10:44:32,296 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-03-31 10:44:32,296 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-03-31 10:44:32,304 DEBUG quick_subs database passes. 2010-03-31 10:44:32,305 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,305 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,305 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,305 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,305 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,306 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,306 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 09:17:12 2010-03-31 10:44:32,306 DEBUG quick_subs dd0: 79.638553 dd1: 89.386944 2010-03-31 10:44:32,306 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,306 DEBUG quick_subs reading time range 2010-03-31 10:44:32,306 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 09:17:12 2010-03-31 10:44:32,307 DEBUG quick_subs dd0: 79.638553 dd1: 89.386944 2010-03-31 10:44:32,307 DEBUG quick_subs codas database currently goes from 2010/03/21 15:19:31 to 2010/03/31 09:17:12 2010-03-31 10:44:32,307 DEBUG quick_subs (79.638553 to 89.386944) 2010-03-31 10:44:32,307 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019found existing adcpdb blocks: %s 020found existing adcpdb blocks: %s 021found existing adcpdb blocks: %s 022found existing adcpdb blocks: %s 023found existing adcpdb blocks: %s 024found existing adcpdb blocks: %s 025 2010-03-31 10:44:32,308 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 021 022 023 024 025 026 2010-03-31 10:44:32,308 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025'] 2010-03-31 10:44:32,308 DEBUG quick_subs checked: unloaded blkstrs: ['026'] 2010-03-31 10:44:32,309 DEBUG quick_subs first unloaded file is load/ens_blk026.cmd 2010-03-31 10:44:32,309 DEBUG quick_subs data goes from 2010/03/31 09:22:12 to 2010/03/31 10:42:46 2010-03-31 10:44:32,309 DEBUG quick_subs (89.390417 to 89.446366) 2010-03-31 10:44:32,309 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/RR1004/raw/nb150/rr2010_079_54868.raw /home/data/RR1004/raw/nb150/rr2010_079_57600.raw /home/data/RR1004/raw/nb150/rr2010_079_64800.raw /home/data/RR1004/raw/nb150/rr2010_079_72000.raw /home/data/RR1004/raw/nb150/rr2010_079_79200.raw /home/data/RR1004/raw/nb150/rr2010_080_00000.raw /home/data/RR1004/raw/nb150/rr2010_080_07200.raw /home/data/RR1004/raw/nb150/rr2010_080_14400.raw /home/data/RR1004/raw/nb150/rr2010_080_21600.raw /home/data/RR1004/raw/nb150/rr2010_080_28800.raw /home/data/RR1004/raw/nb150/rr2010_080_36000.raw /home/data/RR1004/raw/nb150/rr2010_080_43200.raw /home/data/RR1004/raw/nb150/rr2010_080_50400.raw /home/data/RR1004/raw/nb150/rr2010_080_57600.raw /home/data/RR1004/raw/nb150/rr2010_080_64800.raw /home/data/RR1004/raw/nb150/rr2010_080_72000.raw /home/data/RR1004/raw/nb150/rr2010_080_79200.raw /home/data/RR1004/raw/nb150/rr2010_081_00000.raw /home/data/RR1004/raw/nb150/rr2010_081_07200.raw /home/data/RR1004/raw/nb150/rr2010_081_14400.raw /home/data/RR1004/raw/nb150/rr2010_081_21600.raw /home/data/RR1004/raw/nb150/rr2010_081_28800.raw /home/data/RR1004/raw/nb150/rr2010_081_36000.raw /home/data/RR1004/raw/nb150/rr2010_081_43200.raw /home/data/RR1004/raw/nb150/rr2010_081_50400.raw /home/data/RR1004/raw/nb150/rr2010_081_57600.raw /home/data/RR1004/raw/nb150/rr2010_081_64800.raw /home/data/RR1004/raw/nb150/rr2010_081_72000.raw /home/data/RR1004/raw/nb150/rr2010_081_79200.raw /home/data/RR1004/raw/nb150/rr2010_082_00000.raw /home/data/RR1004/raw/nb150/rr2010_082_07200.raw /home/data/RR1004/raw/nb150/rr2010_082_14400.raw /home/data/RR1004/raw/nb150/rr2010_082_21600.raw /home/data/RR1004/raw/nb150/rr2010_082_28800.raw /home/data/RR1004/raw/nb150/rr2010_082_36000.raw /home/data/RR1004/raw/nb150/rr2010_082_43200.raw /home/data/RR1004/raw/nb150/rr2010_082_50400.raw /home/data/RR1004/raw/nb150/rr2010_082_57600.raw /home/data/RR1004/raw/nb150/rr2010_082_64800.raw /home/data/RR1004/raw/nb150/rr2010_082_72000.raw /home/data/RR1004/raw/nb150/rr2010_082_79200.raw /home/data/RR1004/raw/nb150/rr2010_083_00000.raw /home/data/RR1004/raw/nb150/rr2010_083_07200.raw /home/data/RR1004/raw/nb150/rr2010_083_14400.raw /home/data/RR1004/raw/nb150/rr2010_083_21600.raw /home/data/RR1004/raw/nb150/rr2010_083_28800.raw /home/data/RR1004/raw/nb150/rr2010_083_36000.raw /home/data/RR1004/raw/nb150/rr2010_083_43200.raw /home/data/RR1004/raw/nb150/rr2010_083_50400.raw /home/data/RR1004/raw/nb150/rr2010_083_57600.raw /home/data/RR1004/raw/nb150/rr2010_083_64800.raw /home/data/RR1004/raw/nb150/rr2010_083_72000.raw /home/data/RR1004/raw/nb150/rr2010_083_79200.raw /home/data/RR1004/raw/nb150/rr2010_084_00000.raw /home/data/RR1004/raw/nb150/rr2010_084_07200.raw /home/data/RR1004/raw/nb150/rr2010_084_14400.raw /home/data/RR1004/raw/nb150/rr2010_084_21600.raw /home/data/RR1004/raw/nb150/rr2010_084_28800.raw /home/data/RR1004/raw/nb150/rr2010_084_36000.raw /home/data/RR1004/raw/nb150/rr2010_084_43200.raw /home/data/RR1004/raw/nb150/rr2010_084_50400.raw /home/data/RR1004/raw/nb150/rr2010_084_57600.raw /home/data/RR1004/raw/nb150/rr2010_084_64800.raw /home/data/RR1004/raw/nb150/rr2010_084_72000.raw /home/data/RR1004/raw/nb150/rr2010_084_79200.raw /home/data/RR1004/raw/nb150/rr2010_085_00000.raw /home/data/RR1004/raw/nb150/rr2010_085_07200.raw /home/data/RR1004/raw/nb150/rr2010_085_14400.raw /home/data/RR1004/raw/nb150/rr2010_085_21600.raw /home/data/RR1004/raw/nb150/rr2010_085_28800.raw /home/data/RR1004/raw/nb150/rr2010_085_36000.raw /home/data/RR1004/raw/nb150/rr2010_085_43200.raw /home/data/RR1004/raw/nb150/rr2010_085_50400.raw /home/data/RR1004/raw/nb150/rr2010_085_57600.raw /home/data/RR1004/raw/nb150/rr2010_085_64800.raw /home/data/RR1004/raw/nb150/rr2010_085_72000.raw /home/data/RR1004/raw/nb150/rr2010_085_79200.raw /home/data/RR1004/raw/nb150/rr2010_086_00000.raw /home/data/RR1004/raw/nb150/rr2010_086_07200.raw /home/data/RR1004/raw/nb150/rr2010_086_14400.raw /home/data/RR1004/raw/nb150/rr2010_086_21600.raw /home/data/RR1004/raw/nb150/rr2010_086_28800.raw /home/data/RR1004/raw/nb150/rr2010_086_36000.raw /home/data/RR1004/raw/nb150/rr2010_086_43200.raw /home/data/RR1004/raw/nb150/rr2010_086_50400.raw /home/data/RR1004/raw/nb150/rr2010_086_57600.raw /home/data/RR1004/raw/nb150/rr2010_086_64800.raw /home/data/RR1004/raw/nb150/rr2010_086_72000.raw /home/data/RR1004/raw/nb150/rr2010_086_79200.raw /home/data/RR1004/raw/nb150/rr2010_087_00000.raw /home/data/RR1004/raw/nb150/rr2010_087_07200.raw /home/data/RR1004/raw/nb150/rr2010_087_14400.raw /home/data/RR1004/raw/nb150/rr2010_087_21600.raw /home/data/RR1004/raw/nb150/rr2010_087_28800.raw /home/data/RR1004/raw/nb150/rr2010_087_36000.raw /home/data/RR1004/raw/nb150/rr2010_087_43200.raw /home/data/RR1004/raw/nb150/rr2010_087_50400.raw /home/data/RR1004/raw/nb150/rr2010_087_57600.raw /home/data/RR1004/raw/nb150/rr2010_087_64800.raw /home/data/RR1004/raw/nb150/rr2010_087_72000.raw /home/data/RR1004/raw/nb150/rr2010_087_79200.raw /home/data/RR1004/raw/nb150/rr2010_088_00000.raw /home/data/RR1004/raw/nb150/rr2010_088_07200.raw /home/data/RR1004/raw/nb150/rr2010_088_14400.raw /home/data/RR1004/raw/nb150/rr2010_088_21600.raw /home/data/RR1004/raw/nb150/rr2010_088_28800.raw /home/data/RR1004/raw/nb150/rr2010_088_36000.raw /home/data/RR1004/raw/nb150/rr2010_088_43200.raw /home/data/RR1004/raw/nb150/rr2010_088_50400.raw /home/data/RR1004/raw/nb150/rr2010_088_57600.raw /home/data/RR1004/raw/nb150/rr2010_088_64800.raw /home/data/RR1004/raw/nb150/rr2010_088_72000.raw /home/data/RR1004/raw/nb150/rr2010_088_79200.raw /home/data/RR1004/raw/nb150/rr2010_089_00000.raw /home/data/RR1004/raw/nb150/rr2010_089_07200.raw /home/data/RR1004/raw/nb150/rr2010_089_14400.raw /home/data/RR1004/raw/nb150/rr2010_089_21600.raw /home/data/RR1004/raw/nb150/rr2010_089_28800.raw /home/data/RR1004/raw/nb150/rr2010_089_36000.raw 2010-03-31 10:44:32,309 INFO quick_run Wed Mar 31 10:44:32 2010 2010-03-31 10:44:32,309 INFO quick_run about to load uhdas files 2010-03-31 10:44:32,309 INFO quick_run /home/data/RR1004/raw/nb150/rr2010_079_54868.raw /home/data/RR1004/raw/nb150/rr2010_079_57600.raw /home/data/RR1004/raw/nb150/rr2010_079_64800.raw /home/data/RR1004/raw/nb150/rr2010_079_72000.raw /home/data/RR1004/raw/nb150/rr2010_079_79200.raw /home/data/RR1004/raw/nb150/rr2010_080_00000.raw /home/data/RR1004/raw/nb150/rr2010_080_07200.raw /home/data/RR1004/raw/nb150/rr2010_080_14400.raw /home/data/RR1004/raw/nb150/rr2010_080_21600.raw /home/data/RR1004/raw/nb150/rr2010_080_28800.raw /home/data/RR1004/raw/nb150/rr2010_080_36000.raw /home/data/RR1004/raw/nb150/rr2010_080_43200.raw /home/data/RR1004/raw/nb150/rr2010_080_50400.raw /home/data/RR1004/raw/nb150/rr2010_080_57600.raw /home/data/RR1004/raw/nb150/rr2010_080_64800.raw /home/data/RR1004/raw/nb150/rr2010_080_72000.raw /home/data/RR1004/raw/nb150/rr2010_080_79200.raw /home/data/RR1004/raw/nb150/rr2010_081_00000.raw /home/data/RR1004/raw/nb150/rr2010_081_07200.raw /home/data/RR1004/raw/nb150/rr2010_081_14400.raw /home/data/RR1004/raw/nb150/rr2010_081_21600.raw /home/data/RR1004/raw/nb150/rr2010_081_28800.raw /home/data/RR1004/raw/nb150/rr2010_081_36000.raw /home/data/RR1004/raw/nb150/rr2010_081_43200.raw /home/data/RR1004/raw/nb150/rr2010_081_50400.raw /home/data/RR1004/raw/nb150/rr2010_081_57600.raw /home/data/RR1004/raw/nb150/rr2010_081_64800.raw /home/data/RR1004/raw/nb150/rr2010_081_72000.raw /home/data/RR1004/raw/nb150/rr2010_081_79200.raw /home/data/RR1004/raw/nb150/rr2010_082_00000.raw /home/data/RR1004/raw/nb150/rr2010_082_07200.raw /home/data/RR1004/raw/nb150/rr2010_082_14400.raw /home/data/RR1004/raw/nb150/rr2010_082_21600.raw /home/data/RR1004/raw/nb150/rr2010_082_28800.raw /home/data/RR1004/raw/nb150/rr2010_082_36000.raw /home/data/RR1004/raw/nb150/rr2010_082_43200.raw /home/data/RR1004/raw/nb150/rr2010_082_50400.raw /home/data/RR1004/raw/nb150/rr2010_082_57600.raw /home/data/RR1004/raw/nb150/rr2010_082_64800.raw /home/data/RR1004/raw/nb150/rr2010_082_72000.raw /home/data/RR1004/raw/nb150/rr2010_082_79200.raw /home/data/RR1004/raw/nb150/rr2010_083_00000.raw /home/data/RR1004/raw/nb150/rr2010_083_07200.raw /home/data/RR1004/raw/nb150/rr2010_083_14400.raw /home/data/RR1004/raw/nb150/rr2010_083_21600.raw /home/data/RR1004/raw/nb150/rr2010_083_28800.raw /home/data/RR1004/raw/nb150/rr2010_083_36000.raw /home/data/RR1004/raw/nb150/rr2010_083_43200.raw /home/data/RR1004/raw/nb150/rr2010_083_50400.raw /home/data/RR1004/raw/nb150/rr2010_083_57600.raw /home/data/RR1004/raw/nb150/rr2010_083_64800.raw /home/data/RR1004/raw/nb150/rr2010_083_72000.raw /home/data/RR1004/raw/nb150/rr2010_083_79200.raw /home/data/RR1004/raw/nb150/rr2010_084_00000.raw /home/data/RR1004/raw/nb150/rr2010_084_07200.raw /home/data/RR1004/raw/nb150/rr2010_084_14400.raw /home/data/RR1004/raw/nb150/rr2010_084_21600.raw /home/data/RR1004/raw/nb150/rr2010_084_28800.raw /home/data/RR1004/raw/nb150/rr2010_084_36000.raw /home/data/RR1004/raw/nb150/rr2010_084_43200.raw /home/data/RR1004/raw/nb150/rr2010_084_50400.raw /home/data/RR1004/raw/nb150/rr2010_084_57600.raw /home/data/RR1004/raw/nb150/rr2010_084_64800.raw /home/data/RR1004/raw/nb150/rr2010_084_72000.raw /home/data/RR1004/raw/nb150/rr2010_084_79200.raw /home/data/RR1004/raw/nb150/rr2010_085_00000.raw /home/data/RR1004/raw/nb150/rr2010_085_07200.raw /home/data/RR1004/raw/nb150/rr2010_085_14400.raw /home/data/RR1004/raw/nb150/rr2010_085_21600.raw /home/data/RR1004/raw/nb150/rr2010_085_28800.raw /home/data/RR1004/raw/nb150/rr2010_085_36000.raw /home/data/RR1004/raw/nb150/rr2010_085_43200.raw /home/data/RR1004/raw/nb150/rr2010_085_50400.raw /home/data/RR1004/raw/nb150/rr2010_085_57600.raw /home/data/RR1004/raw/nb150/rr2010_085_64800.raw /home/data/RR1004/raw/nb150/rr2010_085_72000.raw /home/data/RR1004/raw/nb150/rr2010_085_79200.raw /home/data/RR1004/raw/nb150/rr2010_086_00000.raw /home/data/RR1004/raw/nb150/rr2010_086_07200.raw /home/data/RR1004/raw/nb150/rr2010_086_14400.raw /home/data/RR1004/raw/nb150/rr2010_086_21600.raw /home/data/RR1004/raw/nb150/rr2010_086_28800.raw /home/data/RR1004/raw/nb150/rr2010_086_36000.raw /home/data/RR1004/raw/nb150/rr2010_086_43200.raw /home/data/RR1004/raw/nb150/rr2010_086_50400.raw /home/data/RR1004/raw/nb150/rr2010_086_57600.raw /home/data/RR1004/raw/nb150/rr2010_086_64800.raw /home/data/RR1004/raw/nb150/rr2010_086_72000.raw /home/data/RR1004/raw/nb150/rr2010_086_79200.raw /home/data/RR1004/raw/nb150/rr2010_087_00000.raw /home/data/RR1004/raw/nb150/rr2010_087_07200.raw /home/data/RR1004/raw/nb150/rr2010_087_14400.raw /home/data/RR1004/raw/nb150/rr2010_087_21600.raw /home/data/RR1004/raw/nb150/rr2010_087_28800.raw /home/data/RR1004/raw/nb150/rr2010_087_36000.raw /home/data/RR1004/raw/nb150/rr2010_087_43200.raw /home/data/RR1004/raw/nb150/rr2010_087_50400.raw /home/data/RR1004/raw/nb150/rr2010_087_57600.raw /home/data/RR1004/raw/nb150/rr2010_087_64800.raw /home/data/RR1004/raw/nb150/rr2010_087_72000.raw /home/data/RR1004/raw/nb150/rr2010_087_79200.raw /home/data/RR1004/raw/nb150/rr2010_088_00000.raw /home/data/RR1004/raw/nb150/rr2010_088_07200.raw /home/data/RR1004/raw/nb150/rr2010_088_14400.raw /home/data/RR1004/raw/nb150/rr2010_088_21600.raw /home/data/RR1004/raw/nb150/rr2010_088_28800.raw /home/data/RR1004/raw/nb150/rr2010_088_36000.raw /home/data/RR1004/raw/nb150/rr2010_088_43200.raw /home/data/RR1004/raw/nb150/rr2010_088_50400.raw /home/data/RR1004/raw/nb150/rr2010_088_57600.raw /home/data/RR1004/raw/nb150/rr2010_088_64800.raw /home/data/RR1004/raw/nb150/rr2010_088_72000.raw /home/data/RR1004/raw/nb150/rr2010_088_79200.raw /home/data/RR1004/raw/nb150/rr2010_089_00000.raw /home/data/RR1004/raw/nb150/rr2010_089_07200.raw /home/data/RR1004/raw/nb150/rr2010_089_14400.raw /home/data/RR1004/raw/nb150/rr2010_089_21600.raw /home/data/RR1004/raw/nb150/rr2010_089_28800.raw /home/data/RR1004/raw/nb150/rr2010_089_36000.raw 2010-03-31 10:44:32,310 DEBUG quick_setup load/ldcodas.tmp exists 2010-03-31 10:44:32,310 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,310 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/load 2010-03-31 10:44:32,310 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,310 DEBUG quick_subs in /home/data/RR1004/proc/nb150/load 2010-03-31 10:44:32,310 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025'] 2010-03-31 10:44:32,311 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026'] 2010-03-31 10:44:32,311 DEBUG quick_subs starttime is 2010/03/31 09:22:12 2010-03-31 10:44:32,311 DEBUG quick_subs RESETTING thisload_time_range 2010-03-31 10:44:32,311 DEBUG quick_subs time range of data to be loaded: 2010/03/31 09:22:12 to 2010/03/31 10:42:46 2010-03-31 10:44:32,312 DEBUG quick_subs data startdd 89.390417 data enddd 89.446366 2010-03-31 10:44:32,312 DEBUG quick_subs about to load from these cmd files ['ens_blk026.cmd'] 2010-03-31 10:44:32,312 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_rr DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2010 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk026.cmd 2010-03-31 10:44:32,312 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2010-03-31 10:44:32,320 DEBUG quick_subs removing a_rrdir.blk 2010-03-31 10:44:32,320 DEBUG quick_subs about to run mkblkdir 2010-03-31 10:44:32,320 DEBUG quick_subs database still exists; rerunning mkdirblk 2010-03-31 10:44:32,321 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2010-03-31 10:44:32,331 DEBUG quick_subs database passes. 2010-03-31 10:44:32,331 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,332 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,332 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,332 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,332 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,332 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,333 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:42:27 2010-03-31 10:44:32,333 DEBUG quick_subs dd0: 79.638553 dd1: 89.446146 2010-03-31 10:44:32,333 DEBUG quick_subs writing time range from a_rr.lst to a_rr.tr 2010-03-31 10:44:32,333 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,333 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,333 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,333 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2010-03-31 10:44:32,334 DEBUG quick_subs extracting time range 2010-03-31 10:44:32,334 DEBUG quick_subs start_end_time 2010/03/21 15:19:31 to 2010/03/31 10:42:27 2010-03-31 10:44:32,334 DEBUG quick_subs dd0: 79.638553 dd1: 89.446146 2010-03-31 10:44:32,334 DEBUG quick_adcp loaded_time_range is 2010/03/21 15:19:31 to 2010/03/31 10:42:27 2010-03-31 10:44:32,334 DEBUG quick_adcp (79.638553 to 89.446146) 2010-03-31 10:44:32,334 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,335 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/adcpdb 2010-03-31 10:44:32,335 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,335 DEBUG quick_subs dbname: a_rr output: a_rr.cnh time_ranges: all 2010-03-31 10:44:32,335 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2010-03-31 10:44:32,354 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2010-03-31 10:44:32,354 DEBUG quick_run executing commands from /home/data/RR1004/proc/nb150/edit 2010-03-31 10:44:32,355 DEBUG quick_run setup.m exists. not replacing 2010-03-31 10:44:32,355 DEBUG quick_run asetup.m exists. not replacing 2010-03-31 10:44:32,355 DEBUG quick_run aflagit_setup.m exists. not replacing 2010-03-31 10:44:32,355 DEBUG quick_run ------------ step 4: run setflags ------------- 2010-03-31 10:44:32,355 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,355 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/edit 2010-03-31 10:44:32,355 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,356 DEBUG quick_subs dbname: ../adcpdb/a_rr pg_min: 50 set_range_bit time_ranges: all 2010-03-31 10:44:32,356 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-03-31 10:44:32,393 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2010-03-31 10:44:32,393 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,393 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:32,394 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,396 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2010-03-31 10:44:32,396 DEBUG quick_run hcorr_inst is ashtech 2010-03-31 10:44:32,397 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2010-03-31 10:44:32,397 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,397 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/rotate 2010-03-31 10:44:32,397 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,397 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: scn.hdg step_size= 1 year_base= 2010 time_ranges: all 2010-03-31 10:44:32,397 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2010-03-31 10:44:32,425 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:32,425 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/rotate 2010-03-31 10:44:32,425 DEBUG quick_setup running python command "method" 2010-03-31 10:44:32,659 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') hcorfile = 'ens_hcorr.asc'; proc_yearbase = 2010; cruiseid = 'RR1004'; if exist(hcorfile) plot_hcorstats('comment', cruiseid,... 'proc_yearbase', proc_yearbase,... 'plot_ddrange', 1,... 'plottype','fancy',... 'hcorfile', hcorfile,... 'gps_attname', 'ashtech',... 'cruiseid', cruiseid,... 'outfilebase', 'hcorr'); end 2010-03-31 10:44:34,307 DEBUG quick_run ------------ step 7: rotate ------------- 2010-03-31 10:44:34,307 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,307 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/rotate 2010-03-31 10:44:34,308 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,338 DEBUG quick_subs last rotated time from log file: 2010/03/31 10:12:38 2010-03-31 10:44:34,338 DEBUG quick_subs time range of currently loaded data: 2010/03/21 15:19:31 to 2010/03/31 10:42:27 2010-03-31 10:44:34,338 DEBUG quick_subs (79.638553 to 89.446146) 2010-03-31 10:44:34,339 DEBUG quick_setup cal/rotate/rotate.tmp exists 2010-03-31 10:44:34,339 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,339 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/rotate 2010-03-31 10:44:34,340 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,340 DEBUG quick_subs DB_NAME: ../../adcpdb/a_rr LOG_FILE: rotate.log TIME_RANGE: 2010/03/31 09:22:12 to 2010/03/31 10:42:46 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2010 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2010-03-31 10:44:34,340 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2010-03-31 10:44:34,344 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-03-31 10:44:34,345 DEBUG quick_setup nav/as_nav.tmp exists 2010-03-31 10:44:34,345 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,345 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:34,345 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,345 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/03/21 15:19:31 to 2010/03/31 10:42:27 /* the whole time range */ 2010-03-31 10:44:34,345 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-03-31 10:44:34,406 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-03-31 10:44:34,406 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,406 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:34,406 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,406 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-03-31 10:44:34,407 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-03-31 10:44:34,450 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-03-31 10:44:34,450 DEBUG quick_setup nav/smoothr.tmp exists 2010-03-31 10:44:34,450 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,450 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:34,450 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,451 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-03-31 10:44:34,451 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-03-31 10:44:34,675 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:34,676 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:34,676 DEBUG quick_setup running python command "method" 2010-03-31 10:44:34,676 DEBUG call_matlab --> clear all 2010-03-31 10:44:34,706 DEBUG call_matlab <-- >> 2010-03-31 10:44:34,706 DEBUG call_matlab --> close all 2010-03-31 10:44:34,761 DEBUG call_matlab <-- >> 2010-03-31 10:44:34,761 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:34,763 DEBUG call_matlab <-- >> 2010-03-31 10:44:34,763 DEBUG call_matlab --> refsm 2010-03-31 10:44:35,801 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 2813 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2010-03-31 10:44:35,801 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-03-31 10:44:35,801 DEBUG quick_setup nav/putnav.tmp exists 2010-03-31 10:44:35,801 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:35,801 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:35,802 DEBUG quick_setup running python command "method" 2010-03-31 10:44:35,802 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-03-31 10:44:35,802 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-03-31 10:44:35,868 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2010-03-31 10:44:35,868 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:35,868 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:35,869 DEBUG quick_setup running python command "method" 2010-03-31 10:44:35,869 DEBUG quick_subs Created callrtmp.m 2010-03-31 10:44:35,870 DEBUG call_matlab --> clear all 2010-03-31 10:44:35,876 DEBUG call_matlab <-- >> 2010-03-31 10:44:35,876 DEBUG call_matlab --> close all 2010-03-31 10:44:35,914 DEBUG call_matlab <-- >> 2010-03-31 10:44:35,914 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:35,916 DEBUG call_matlab <-- >> 2010-03-31 10:44:35,916 DEBUG call_matlab --> callrtmp_tmp 2010-03-31 10:44:37,093 DEBUG call_matlab <-- cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 >> 2010-03-31 10:44:37,094 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2010-03-31 10:44:37,094 DEBUG quick_run find profile flags ------------ *** ------------- 2010-03-31 10:44:37,094 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:37,094 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/edit 2010-03-31 10:44:37,094 DEBUG quick_setup running python command "method" 2010-03-31 10:44:37,986 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2010-03-31 10:44:37,986 DEBUG quick_run starting in: /home/data/RR1004/proc/nb150 2010-03-31 10:44:37,986 DEBUG quick_run executing commands from: edit 2010-03-31 10:44:37,988 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_rr abadbin_tmp.asc 2010-03-31 10:44:37,994 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_rr 2010-03-31 10:44:37,998 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2010-03-31 10:44:38,042 DEBUG quick_run changing directories back to /home/data/RR1004/proc/nb150 2010-03-31 10:44:38,042 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2010-03-31 10:44:38,042 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2010-03-31 10:44:38,042 DEBUG quick_setup nav/as_nav.tmp exists 2010-03-31 10:44:38,042 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:38,043 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:38,043 DEBUG quick_setup running python command "method" 2010-03-31 10:44:38,043 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/03/21 15:19:31 to 2010/03/31 10:42:27 /* the whole time range */ 2010-03-31 10:44:38,043 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-03-31 10:44:38,101 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2010-03-31 10:44:38,102 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:38,102 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:38,102 DEBUG quick_setup running python command "method" 2010-03-31 10:44:38,102 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.nav fix_file: a_rr.gps output: a_rr.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 10 2010-03-31 10:44:38,102 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2010-03-31 10:44:38,165 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2010-03-31 10:44:38,165 DEBUG quick_setup nav/smoothr.tmp exists 2010-03-31 10:44:38,165 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:38,165 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:38,165 DEBUG quick_setup running python command "method" 2010-03-31 10:44:38,165 DEBUG quick_subs reference_file: a_rr.nav refabs_output: a_rr.ref output: a_rr.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2010-03-31 10:44:38,166 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2010-03-31 10:44:38,385 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:38,385 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:38,385 DEBUG quick_setup running python command "method" 2010-03-31 10:44:38,385 DEBUG call_matlab --> clear all 2010-03-31 10:44:38,396 DEBUG call_matlab <-- >> 2010-03-31 10:44:38,396 DEBUG call_matlab --> close all 2010-03-31 10:44:38,434 DEBUG call_matlab <-- >> 2010-03-31 10:44:38,434 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:38,436 DEBUG call_matlab <-- >> 2010-03-31 10:44:38,436 DEBUG call_matlab --> refsm 2010-03-31 10:44:39,456 DEBUG call_matlab <-- Starting getmat ... Filename prefix is: refsm_ INFO: database ../adcpdb/a_rr opened Searching CODAS database ==> ../adcpdb/a_rr for block 0 profile 0 Max no. of profiles ==> 100001 Max no. of bins ==> 20 % WARNING: Reached end of database Retrieved 2813 profiles, 20 bins INFO: database closed loading getmat output 10 percent done... 20 percent done... 30 percent done... 40 percent done... 50 percent done... 60 percent done... 70 percent done... 80 percent done... 90 percent done... 100 percent done... >> 2010-03-31 10:44:39,456 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2010-03-31 10:44:39,456 DEBUG quick_setup nav/putnav.tmp exists 2010-03-31 10:44:39,456 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:39,457 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:39,457 DEBUG quick_setup running python command "method" 2010-03-31 10:44:39,457 DEBUG quick_subs dbname: ../adcpdb/a_rr position_file: refsm.sm year_base= 2010 tolerance= 5 navigation_sources: gps end 2010-03-31 10:44:39,457 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2010-03-31 10:44:39,526 DEBUG quick_run ------------ step 12: plot reference layer ------------- 2010-03-31 10:44:39,526 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:39,526 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:39,526 DEBUG quick_setup running python command "method" 2010-03-31 10:44:39,527 DEBUG quick_subs Created callrtmp.m 2010-03-31 10:44:39,527 DEBUG call_matlab --> clear all 2010-03-31 10:44:39,533 DEBUG call_matlab <-- >> 2010-03-31 10:44:39,533 DEBUG call_matlab --> close all 2010-03-31 10:44:39,571 DEBUG call_matlab <-- >> 2010-03-31 10:44:39,571 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:39,573 DEBUG call_matlab <-- >> 2010-03-31 10:44:39,573 DEBUG call_matlab --> callrtmp_tmp 2010-03-31 10:44:40,753 DEBUG call_matlab <-- cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 cruise = RR1004 >> 2010-03-31 10:44:40,753 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2010-03-31 10:44:40,753 DEBUG quick_setup edit/lst_temp.tmp exists 2010-03-31 10:44:40,753 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:40,753 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/edit 2010-03-31 10:44:40,753 DEBUG quick_setup running python command "method" 2010-03-31 10:44:40,754 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr.tem step_size= 1 year_base= 2010 time_ranges: all 2010-03-31 10:44:40,754 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2010-03-31 10:44:40,787 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:40,788 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/edit 2010-03-31 10:44:40,788 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,390 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2010-03-31 10:44:41,391 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2010-03-31 10:44:41,391 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,391 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/botmtrk 2010-03-31 10:44:41,391 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,391 DEBUG quick_subs dbname: ../../adcpdb/a_rr output: a_rr.btm step_size= 1 year_base= 2010 time_ranges: 2010/03/21 15:19:31 to 2010/03/31 10:42:27 /* whole time range */ 2010-03-31 10:44:41,391 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2010-03-31 10:44:41,405 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2010-03-31 10:44:41,405 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,405 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/botmtrk 2010-03-31 10:44:41,405 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,405 DEBUG quick_subs fix_file_type: simple reference_file: a_rr.btm fix_file: ../../nav/a_rr.gps output: a_rr.ref year_base= 2010 ensemble_length= 300 gap_tolerance= 60 2010-03-31 10:44:41,405 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2010-03-31 10:44:41,409 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,409 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/botmtrk 2010-03-31 10:44:41,409 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,409 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') [a, ph, gd_mask, d] = ... btcaluv('a_rr.ref','a_rr.btm',... 'ADCP RR1004 step size 1 ', 1); 2010-03-31 10:44:41,524 DEBUG quick_setup nav/as_nav.tmp exists 2010-03-31 10:44:41,524 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,525 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/nav 2010-03-31 10:44:41,525 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,525 DEBUG quick_subs dbname: ../adcpdb/a_rr output: a_rr step_size: 1 ndepth: 20 time_ranges: separate year_base= 2010 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2010/03/21 15:19:31 to 2010/03/31 10:42:27 /* the whole time range */ 2010-03-31 10:44:41,525 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2010-03-31 10:44:41,580 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2010-03-31 10:44:41,580 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,581 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/watertrk 2010-03-31 10:44:41,581 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,581 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_rr.gps reference_file: ../../nav/a_rr.nav output_file: a_rr_7.cal year_base= 2010 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2010-03-31 10:44:41,581 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2010-03-31 10:44:41,600 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:41,601 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/cal/watertrk 2010-03-31 10:44:41,601 DEBUG quick_setup running python command "method" 2010-03-31 10:44:41,601 DEBUG quick_subs about to run %% no diary written %% set(0,'defaultfigureposition',[0 0 300 400]) set(0,'defaultfiguremenubar','none') set(0,'defaultfiguretoolbar','none') adcpcal('a_rr_7.cal', 'ADCP RR1004 7ens') 2010-03-31 10:44:41,601 DEBUG call_matlab --> clear all 2010-03-31 10:44:41,605 DEBUG call_matlab <-- >> 2010-03-31 10:44:41,606 DEBUG call_matlab --> close all 2010-03-31 10:44:41,644 DEBUG call_matlab <-- >> 2010-03-31 10:44:41,644 DEBUG call_matlab --> cd /home/data/RR1004/proc/nb150/cal/watertrk 2010-03-31 10:44:41,645 DEBUG call_matlab <-- >> 2010-03-31 10:44:41,645 DEBUG call_matlab --> calladcpcal_tmp 2010-03-31 10:44:42,427 DEBUG call_matlab <-- figure saved as cal1.ps figure saved as cal2.ps ans = 40 ans = j_ph: 11 j_amp: 10 j_t: 2 j_du: 5 j_dv: 6 j_dt: 9 j_mvar: 8 j_var: 7 calr: [34x11 double] igood: [32x1 double] >> 2010-03-31 10:44:42,428 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2010-03-31 10:44:42,428 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:42,428 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/vector 2010-03-31 10:44:42,428 DEBUG quick_setup running python command "method" 2010-03-31 10:44:42,428 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2010-03-31 10:44:42,433 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:42,433 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/vector 2010-03-31 10:44:42,433 DEBUG quick_setup running python command "method" 2010-03-31 10:44:42,433 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2010-03-31 10:44:42,496 DEBUG quick_asect done making vector matfiles 2010-03-31 10:44:42,497 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:42,497 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/contour 2010-03-31 10:44:42,497 DEBUG quick_setup running python command "method" 2010-03-31 10:44:42,497 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_rr.tmp 2010-03-31 10:44:42,504 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:42,504 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/contour 2010-03-31 10:44:42,504 DEBUG quick_setup running python command "method" 2010-03-31 10:44:42,504 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2010-03-31 10:44:42,592 DEBUG quick_setup starting in /home/data/RR1004/proc/nb150 2010-03-31 10:44:42,593 DEBUG quick_setup executing commands from /home/data/RR1004/proc/nb150/contour 2010-03-31 10:44:42,593 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_rr 2010-03-31 10:44:42,906 DEBUG quick_asect done running getmat with "allbins" 2010-03-31 10:44:42,906 INFO root copying NOFIG to /home/adcp/www/figures/nb150_hcorr_plot.png 2010-03-31 10:44:42,907 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/nb150_hcorr_plot_thumb.png 2010-03-31 10:44:42,907 DEBUG root matfile is contour/contour_uv.mat 2010-03-31 10:44:42,910 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/nb150_cont_uv.mat 2010-03-31 10:44:42,910 DEBUG root matfile is vector/vector_uv.mat 2010-03-31 10:44:42,910 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/nb150_vect_uv.mat 2010-03-31 10:44:42,910 DEBUG root matfile is contour/contour_xy.mat 2010-03-31 10:44:42,910 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/nb150_cont_xy.mat 2010-03-31 10:44:42,911 DEBUG root matfile is vector/vector_xy.mat 2010-03-31 10:44:42,911 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/nb150_vect_xy.mat 2010-03-31 10:44:42,911 DEBUG root about to copy file edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2010-03-31 10:44:42,912 INFO root copying edit/a_rr.tem to /home/adcp/www/data/nb150_temp.asc 2010-03-31 10:44:42,912 INFO root Ending quick_adcp.py 2010-03-31 10:44:43,011 DEBUG quick_setup killed matlab engine