2009-09-16 15:56:11,427 DEBUG root about to write control file parameters to --yearbase 2009 --pingtype bb --cfgbase km0921 --cruisename km0921 --instclass wh --instname wh300 --dbname a_km --datatype uhdas --datadir /home/data/km0921/raw/wh300 --cfgpath /home/data/km0921/proc/wh300/config --ens_len 120 --ping_headcorr --hcorr_inst posmv --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto --acc_heading_cutoff 0.018000 --npycalc all --mplplots all 2009-09-16 15:56:11,428 DEBUG quick_adcp sys.argv = /home/currents/programs/uhdas/scripts/run_quick.py -d wh300 --npycalc all --mplplots all 2009-09-16 15:56:11,430 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ adcpcal aedit aflagit_setup as_cont as_nav as_vect asetup ashrot btcaluv catnav check_opts cleanup copy_ensfile ddtime def_qlist get_asvars get_cmd_timerange get_data2load_timerange get_filelist get_gyrodh get_headcorrstats get_lstblk_tr get_matcfgstr get_remaining_times get_seapath11dh get_time_range getmat ldcodas list2matcell llgrid loadens loadhdss loadlta loadping loaduh lst_btrk lst_conf lst_hdg lst_temp mpltest opts overlapping plot_lastensq plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp plottemp_mpl plotwtcal_mpl print_attlog putnav refabs refabsbt refplot refsm rotate rotated run_adcpsect run_applyedit run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_listblocks run_loaddata run_lstconfig run_lsttemp run_matfiles run_plotter run_putnav run_rawsetup run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scandata run_setflags run_smoothr run_updategbin run_xducerxy scanping scanraw setflags smoothr startmatlab timegrid timslip ubprint update_gbin user_defined_headfunc xducerxy zapsetup 2009-09-16 15:56:11,431 DEBUG quick_adcp progdir = /home/currents/programs 2009-09-16 15:56:11,431 DEBUG quick_adcp binos = lnx 2009-09-16 15:56:11,431 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2009-09-16 15:56:11,432 DEBUG quick_setup yearbase is 2009, proc_yearbase is 2009 2009-09-16 15:56:11,432 DEBUG quick_setup numpy calculations to run: refsm 2009-09-16 15:56:11,432 DEBUG quick_setup mplplots to run: temp, nav, refl, hcorr, wtcal, btcal 2009-09-16 15:56:11,432 DEBUG quick_setup processing data logged with uhdas: 2009-09-16 15:56:11,432 DEBUG quick_setup datatype is uhdas 2009-09-16 15:56:11,433 DEBUG quick_setup pingtype is bb 2009-09-16 15:56:11,433 DEBUG quick_setup instclass is wh 2009-09-16 15:56:11,433 DEBUG quick_setup no post-processing heading correction will be used 2009-09-16 15:56:11,433 DEBUG quick_setup transducer depth set in *_cfg.m file 2009-09-16 15:56:11,465 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = wh; instname = 'wh300'; pingtype = 'bb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'km0921',... 'cfgpath' , '/home/data/km0921/proc/wh300/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2009-09-16 15:56:11,465 DEBUG quick_setup ------- starting Matlab engine ------- 2009-09-16 15:56:11,465 DEBUG quick_setup ['/home/currents/programs/matlab'] 2009-09-16 15:56:11,469 DEBUG call_matlab starting to wait for initial prompt 2009-09-16 15:56:12,399 DEBUG call_matlab received initial prompt 2009-09-16 15:56:12,611 DEBUG quick_adcp cwd is /home/data/km0921/proc/wh300 about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-09-16 15:56:12,611 DEBUG quick_adcp original fix file is a_km.gps 2009-09-16 15:56:12,612 DEBUG quick_adcp smoothed nav file is a_km_refsm.asc 2009-09-16 15:56:12,612 DEBUG quick_asect extracting matlab files for wh300, bb pings 2009-09-16 15:56:12,739 DEBUG quick_subs found 289 files using wildcard expansion from "/home/data/km0921/raw/wh300/*.raw" 2009-09-16 15:56:12,739 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/wh300/km2009_234_64397.raw /home/data/km0921/raw/wh300/km2009_234_64800.raw /home/data/km0921/raw/wh300/km2009_234_72000.raw /home/data/km0921/raw/wh300/km2009_234_78778.raw /home/data/km0921/raw/wh300/km2009_234_79200.raw /home/data/km0921/raw/wh300/km2009_235_00000.raw /home/data/km0921/raw/wh300/km2009_235_07200.raw /home/data/km0921/raw/wh300/km2009_235_14400.raw /home/data/km0921/raw/wh300/km2009_235_21600.raw /home/data/km0921/raw/wh300/km2009_235_28800.raw /home/data/km0921/raw/wh300/km2009_235_36000.raw /home/data/km0921/raw/wh300/km2009_235_43200.raw /home/data/km0921/raw/wh300/km2009_235_50400.raw /home/data/km0921/raw/wh300/km2009_235_57600.raw /home/data/km0921/raw/wh300/km2009_235_64800.raw /home/data/km0921/raw/wh300/km2009_235_72000.raw /home/data/km0921/raw/wh300/km2009_235_79200.raw /home/data/km0921/raw/wh300/km2009_236_00000.raw /home/data/km0921/raw/wh300/km2009_236_07200.raw /home/data/km0921/raw/wh300/km2009_236_14400.raw /home/data/km0921/raw/wh300/km2009_236_21600.raw /home/data/km0921/raw/wh300/km2009_236_28800.raw /home/data/km0921/raw/wh300/km2009_236_36000.raw /home/data/km0921/raw/wh300/km2009_236_43200.raw /home/data/km0921/raw/wh300/km2009_236_50400.raw /home/data/km0921/raw/wh300/km2009_236_57600.raw /home/data/km0921/raw/wh300/km2009_236_64800.raw /home/data/km0921/raw/wh300/km2009_236_72000.raw /home/data/km0921/raw/wh300/km2009_236_79200.raw /home/data/km0921/raw/wh300/km2009_237_00000.raw /home/data/km0921/raw/wh300/km2009_237_07200.raw /home/data/km0921/raw/wh300/km2009_237_14400.raw /home/data/km0921/raw/wh300/km2009_237_21600.raw /home/data/km0921/raw/wh300/km2009_237_28800.raw /home/data/km0921/raw/wh300/km2009_237_36000.raw /home/data/km0921/raw/wh300/km2009_237_43200.raw /home/data/km0921/raw/wh300/km2009_237_50400.raw 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/home/data/km0921/raw/wh300/km2009_256_00000.raw /home/data/km0921/raw/wh300/km2009_256_07200.raw /home/data/km0921/raw/wh300/km2009_256_14400.raw /home/data/km0921/raw/wh300/km2009_256_21600.raw /home/data/km0921/raw/wh300/km2009_256_28800.raw /home/data/km0921/raw/wh300/km2009_256_36000.raw /home/data/km0921/raw/wh300/km2009_256_43200.raw /home/data/km0921/raw/wh300/km2009_256_50400.raw /home/data/km0921/raw/wh300/km2009_256_57600.raw /home/data/km0921/raw/wh300/km2009_256_64800.raw /home/data/km0921/raw/wh300/km2009_256_72000.raw /home/data/km0921/raw/wh300/km2009_256_79200.raw /home/data/km0921/raw/wh300/km2009_257_00000.raw /home/data/km0921/raw/wh300/km2009_257_07200.raw /home/data/km0921/raw/wh300/km2009_257_14400.raw /home/data/km0921/raw/wh300/km2009_257_21600.raw /home/data/km0921/raw/wh300/km2009_257_28800.raw /home/data/km0921/raw/wh300/km2009_257_36000.raw /home/data/km0921/raw/wh300/km2009_257_43200.raw /home/data/km0921/raw/wh300/km2009_257_50400.raw /home/data/km0921/raw/wh300/km2009_257_57600.raw /home/data/km0921/raw/wh300/km2009_257_64800.raw /home/data/km0921/raw/wh300/km2009_257_72000.raw /home/data/km0921/raw/wh300/km2009_257_79200.raw /home/data/km0921/raw/wh300/km2009_258_00000.raw /home/data/km0921/raw/wh300/km2009_258_07200.raw /home/data/km0921/raw/wh300/km2009_258_14400.raw /home/data/km0921/raw/wh300/km2009_258_21600.raw /home/data/km0921/raw/wh300/km2009_258_28800.raw /home/data/km0921/raw/wh300/km2009_258_36000.raw /home/data/km0921/raw/wh300/km2009_258_43200.raw /home/data/km0921/raw/wh300/km2009_258_50400.raw 2009-09-16 15:56:12,740 DEBUG quick_adcp LASTFILES invoked. using only 289 files from end of filelist 2009-09-16 15:56:12,740 DEBUG quick_adcp using delblks = 1 2009-09-16 15:56:12,741 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/wh300/km2009_234_64397.raw /home/data/km0921/raw/wh300/km2009_234_64800.raw /home/data/km0921/raw/wh300/km2009_234_72000.raw /home/data/km0921/raw/wh300/km2009_234_78778.raw /home/data/km0921/raw/wh300/km2009_234_79200.raw /home/data/km0921/raw/wh300/km2009_235_00000.raw /home/data/km0921/raw/wh300/km2009_235_07200.raw /home/data/km0921/raw/wh300/km2009_235_14400.raw /home/data/km0921/raw/wh300/km2009_235_21600.raw /home/data/km0921/raw/wh300/km2009_235_28800.raw /home/data/km0921/raw/wh300/km2009_235_36000.raw /home/data/km0921/raw/wh300/km2009_235_43200.raw /home/data/km0921/raw/wh300/km2009_235_50400.raw /home/data/km0921/raw/wh300/km2009_235_57600.raw /home/data/km0921/raw/wh300/km2009_235_64800.raw /home/data/km0921/raw/wh300/km2009_235_72000.raw /home/data/km0921/raw/wh300/km2009_235_79200.raw /home/data/km0921/raw/wh300/km2009_236_00000.raw /home/data/km0921/raw/wh300/km2009_236_07200.raw /home/data/km0921/raw/wh300/km2009_236_14400.raw /home/data/km0921/raw/wh300/km2009_236_21600.raw /home/data/km0921/raw/wh300/km2009_236_28800.raw /home/data/km0921/raw/wh300/km2009_236_36000.raw /home/data/km0921/raw/wh300/km2009_236_43200.raw /home/data/km0921/raw/wh300/km2009_236_50400.raw /home/data/km0921/raw/wh300/km2009_236_57600.raw /home/data/km0921/raw/wh300/km2009_236_64800.raw /home/data/km0921/raw/wh300/km2009_236_72000.raw /home/data/km0921/raw/wh300/km2009_236_79200.raw /home/data/km0921/raw/wh300/km2009_237_00000.raw /home/data/km0921/raw/wh300/km2009_237_07200.raw /home/data/km0921/raw/wh300/km2009_237_14400.raw /home/data/km0921/raw/wh300/km2009_237_21600.raw /home/data/km0921/raw/wh300/km2009_237_28800.raw /home/data/km0921/raw/wh300/km2009_237_36000.raw /home/data/km0921/raw/wh300/km2009_237_43200.raw /home/data/km0921/raw/wh300/km2009_237_50400.raw /home/data/km0921/raw/wh300/km2009_237_57600.raw /home/data/km0921/raw/wh300/km2009_237_64800.raw /home/data/km0921/raw/wh300/km2009_237_72000.raw /home/data/km0921/raw/wh300/km2009_237_79200.raw /home/data/km0921/raw/wh300/km2009_238_00000.raw /home/data/km0921/raw/wh300/km2009_238_07200.raw /home/data/km0921/raw/wh300/km2009_238_14400.raw /home/data/km0921/raw/wh300/km2009_238_21600.raw /home/data/km0921/raw/wh300/km2009_238_28800.raw /home/data/km0921/raw/wh300/km2009_238_36000.raw /home/data/km0921/raw/wh300/km2009_238_43200.raw /home/data/km0921/raw/wh300/km2009_238_50400.raw /home/data/km0921/raw/wh300/km2009_238_57600.raw /home/data/km0921/raw/wh300/km2009_238_64800.raw /home/data/km0921/raw/wh300/km2009_238_72000.raw /home/data/km0921/raw/wh300/km2009_238_79200.raw /home/data/km0921/raw/wh300/km2009_239_00000.raw /home/data/km0921/raw/wh300/km2009_239_07200.raw /home/data/km0921/raw/wh300/km2009_239_14400.raw /home/data/km0921/raw/wh300/km2009_239_21600.raw /home/data/km0921/raw/wh300/km2009_239_28800.raw /home/data/km0921/raw/wh300/km2009_239_36000.raw /home/data/km0921/raw/wh300/km2009_239_43200.raw /home/data/km0921/raw/wh300/km2009_239_50400.raw /home/data/km0921/raw/wh300/km2009_239_57600.raw /home/data/km0921/raw/wh300/km2009_239_64800.raw /home/data/km0921/raw/wh300/km2009_239_72000.raw /home/data/km0921/raw/wh300/km2009_239_79200.raw /home/data/km0921/raw/wh300/km2009_240_00000.raw /home/data/km0921/raw/wh300/km2009_240_07200.raw /home/data/km0921/raw/wh300/km2009_240_14400.raw /home/data/km0921/raw/wh300/km2009_240_21600.raw /home/data/km0921/raw/wh300/km2009_240_28800.raw /home/data/km0921/raw/wh300/km2009_240_36000.raw /home/data/km0921/raw/wh300/km2009_240_43200.raw /home/data/km0921/raw/wh300/km2009_240_50400.raw /home/data/km0921/raw/wh300/km2009_240_57600.raw /home/data/km0921/raw/wh300/km2009_240_64800.raw /home/data/km0921/raw/wh300/km2009_240_72000.raw /home/data/km0921/raw/wh300/km2009_240_79200.raw /home/data/km0921/raw/wh300/km2009_241_00000.raw /home/data/km0921/raw/wh300/km2009_241_07200.raw /home/data/km0921/raw/wh300/km2009_241_14400.raw /home/data/km0921/raw/wh300/km2009_241_21600.raw /home/data/km0921/raw/wh300/km2009_241_28800.raw /home/data/km0921/raw/wh300/km2009_241_36000.raw /home/data/km0921/raw/wh300/km2009_241_43200.raw /home/data/km0921/raw/wh300/km2009_241_50400.raw /home/data/km0921/raw/wh300/km2009_241_57600.raw /home/data/km0921/raw/wh300/km2009_241_64800.raw /home/data/km0921/raw/wh300/km2009_241_72000.raw /home/data/km0921/raw/wh300/km2009_241_79200.raw /home/data/km0921/raw/wh300/km2009_242_00000.raw /home/data/km0921/raw/wh300/km2009_242_07200.raw /home/data/km0921/raw/wh300/km2009_242_14400.raw /home/data/km0921/raw/wh300/km2009_242_21600.raw /home/data/km0921/raw/wh300/km2009_242_28800.raw /home/data/km0921/raw/wh300/km2009_242_36000.raw /home/data/km0921/raw/wh300/km2009_242_43200.raw /home/data/km0921/raw/wh300/km2009_242_50400.raw /home/data/km0921/raw/wh300/km2009_242_57600.raw /home/data/km0921/raw/wh300/km2009_242_64800.raw /home/data/km0921/raw/wh300/km2009_242_72000.raw /home/data/km0921/raw/wh300/km2009_242_79200.raw /home/data/km0921/raw/wh300/km2009_243_00000.raw /home/data/km0921/raw/wh300/km2009_243_07200.raw /home/data/km0921/raw/wh300/km2009_243_14400.raw /home/data/km0921/raw/wh300/km2009_243_21600.raw /home/data/km0921/raw/wh300/km2009_243_28800.raw /home/data/km0921/raw/wh300/km2009_243_36000.raw /home/data/km0921/raw/wh300/km2009_243_43200.raw /home/data/km0921/raw/wh300/km2009_243_50400.raw /home/data/km0921/raw/wh300/km2009_243_57600.raw /home/data/km0921/raw/wh300/km2009_243_64800.raw /home/data/km0921/raw/wh300/km2009_243_72000.raw /home/data/km0921/raw/wh300/km2009_243_79200.raw /home/data/km0921/raw/wh300/km2009_244_00000.raw /home/data/km0921/raw/wh300/km2009_244_07200.raw /home/data/km0921/raw/wh300/km2009_244_14400.raw /home/data/km0921/raw/wh300/km2009_244_21600.raw /home/data/km0921/raw/wh300/km2009_244_28800.raw /home/data/km0921/raw/wh300/km2009_244_36000.raw /home/data/km0921/raw/wh300/km2009_244_43200.raw /home/data/km0921/raw/wh300/km2009_244_50400.raw /home/data/km0921/raw/wh300/km2009_244_57600.raw /home/data/km0921/raw/wh300/km2009_244_64800.raw /home/data/km0921/raw/wh300/km2009_244_72000.raw /home/data/km0921/raw/wh300/km2009_244_79200.raw /home/data/km0921/raw/wh300/km2009_245_00000.raw /home/data/km0921/raw/wh300/km2009_245_07200.raw /home/data/km0921/raw/wh300/km2009_245_14400.raw /home/data/km0921/raw/wh300/km2009_245_21600.raw /home/data/km0921/raw/wh300/km2009_245_28800.raw /home/data/km0921/raw/wh300/km2009_245_36000.raw /home/data/km0921/raw/wh300/km2009_245_43200.raw /home/data/km0921/raw/wh300/km2009_245_50400.raw /home/data/km0921/raw/wh300/km2009_245_57600.raw /home/data/km0921/raw/wh300/km2009_245_64800.raw /home/data/km0921/raw/wh300/km2009_245_72000.raw /home/data/km0921/raw/wh300/km2009_245_79200.raw /home/data/km0921/raw/wh300/km2009_246_00000.raw /home/data/km0921/raw/wh300/km2009_246_07200.raw /home/data/km0921/raw/wh300/km2009_246_14400.raw /home/data/km0921/raw/wh300/km2009_246_21600.raw /home/data/km0921/raw/wh300/km2009_246_28800.raw /home/data/km0921/raw/wh300/km2009_246_36000.raw 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/home/data/km0921/raw/wh300/km2009_249_72000.raw /home/data/km0921/raw/wh300/km2009_249_79200.raw /home/data/km0921/raw/wh300/km2009_250_00000.raw /home/data/km0921/raw/wh300/km2009_250_07200.raw /home/data/km0921/raw/wh300/km2009_250_14400.raw /home/data/km0921/raw/wh300/km2009_250_21600.raw /home/data/km0921/raw/wh300/km2009_250_28800.raw /home/data/km0921/raw/wh300/km2009_250_36000.raw /home/data/km0921/raw/wh300/km2009_250_43200.raw /home/data/km0921/raw/wh300/km2009_250_50400.raw /home/data/km0921/raw/wh300/km2009_250_57600.raw /home/data/km0921/raw/wh300/km2009_250_64800.raw /home/data/km0921/raw/wh300/km2009_250_72000.raw /home/data/km0921/raw/wh300/km2009_250_79200.raw /home/data/km0921/raw/wh300/km2009_251_00000.raw /home/data/km0921/raw/wh300/km2009_251_07200.raw /home/data/km0921/raw/wh300/km2009_251_14400.raw /home/data/km0921/raw/wh300/km2009_251_21600.raw /home/data/km0921/raw/wh300/km2009_251_28800.raw /home/data/km0921/raw/wh300/km2009_251_36000.raw /home/data/km0921/raw/wh300/km2009_251_43200.raw /home/data/km0921/raw/wh300/km2009_251_50400.raw /home/data/km0921/raw/wh300/km2009_251_57600.raw /home/data/km0921/raw/wh300/km2009_251_64800.raw /home/data/km0921/raw/wh300/km2009_251_72000.raw /home/data/km0921/raw/wh300/km2009_251_79200.raw /home/data/km0921/raw/wh300/km2009_252_00000.raw /home/data/km0921/raw/wh300/km2009_252_07200.raw /home/data/km0921/raw/wh300/km2009_252_14400.raw /home/data/km0921/raw/wh300/km2009_252_21600.raw /home/data/km0921/raw/wh300/km2009_252_28800.raw /home/data/km0921/raw/wh300/km2009_252_36000.raw /home/data/km0921/raw/wh300/km2009_252_43200.raw /home/data/km0921/raw/wh300/km2009_252_50400.raw /home/data/km0921/raw/wh300/km2009_252_57600.raw /home/data/km0921/raw/wh300/km2009_252_64800.raw /home/data/km0921/raw/wh300/km2009_252_72000.raw /home/data/km0921/raw/wh300/km2009_252_79200.raw /home/data/km0921/raw/wh300/km2009_253_00000.raw /home/data/km0921/raw/wh300/km2009_253_07200.raw /home/data/km0921/raw/wh300/km2009_253_14400.raw /home/data/km0921/raw/wh300/km2009_253_21600.raw /home/data/km0921/raw/wh300/km2009_253_28800.raw /home/data/km0921/raw/wh300/km2009_253_36000.raw /home/data/km0921/raw/wh300/km2009_253_43200.raw /home/data/km0921/raw/wh300/km2009_253_50400.raw /home/data/km0921/raw/wh300/km2009_253_57600.raw /home/data/km0921/raw/wh300/km2009_253_64800.raw /home/data/km0921/raw/wh300/km2009_253_72000.raw /home/data/km0921/raw/wh300/km2009_253_79200.raw /home/data/km0921/raw/wh300/km2009_254_00000.raw /home/data/km0921/raw/wh300/km2009_254_07200.raw /home/data/km0921/raw/wh300/km2009_254_14400.raw /home/data/km0921/raw/wh300/km2009_254_21600.raw /home/data/km0921/raw/wh300/km2009_254_28800.raw /home/data/km0921/raw/wh300/km2009_254_36000.raw /home/data/km0921/raw/wh300/km2009_254_43200.raw /home/data/km0921/raw/wh300/km2009_254_50400.raw /home/data/km0921/raw/wh300/km2009_254_57600.raw /home/data/km0921/raw/wh300/km2009_254_64800.raw /home/data/km0921/raw/wh300/km2009_254_72000.raw /home/data/km0921/raw/wh300/km2009_254_79200.raw /home/data/km0921/raw/wh300/km2009_255_00000.raw /home/data/km0921/raw/wh300/km2009_255_07200.raw /home/data/km0921/raw/wh300/km2009_255_14400.raw /home/data/km0921/raw/wh300/km2009_255_21600.raw /home/data/km0921/raw/wh300/km2009_255_28800.raw /home/data/km0921/raw/wh300/km2009_255_36000.raw /home/data/km0921/raw/wh300/km2009_255_43200.raw /home/data/km0921/raw/wh300/km2009_255_50400.raw /home/data/km0921/raw/wh300/km2009_255_57600.raw /home/data/km0921/raw/wh300/km2009_255_64800.raw /home/data/km0921/raw/wh300/km2009_255_72000.raw /home/data/km0921/raw/wh300/km2009_255_79200.raw /home/data/km0921/raw/wh300/km2009_256_00000.raw /home/data/km0921/raw/wh300/km2009_256_07200.raw /home/data/km0921/raw/wh300/km2009_256_14400.raw /home/data/km0921/raw/wh300/km2009_256_21600.raw /home/data/km0921/raw/wh300/km2009_256_28800.raw /home/data/km0921/raw/wh300/km2009_256_36000.raw /home/data/km0921/raw/wh300/km2009_256_43200.raw /home/data/km0921/raw/wh300/km2009_256_50400.raw /home/data/km0921/raw/wh300/km2009_256_57600.raw /home/data/km0921/raw/wh300/km2009_256_64800.raw /home/data/km0921/raw/wh300/km2009_256_72000.raw /home/data/km0921/raw/wh300/km2009_256_79200.raw /home/data/km0921/raw/wh300/km2009_257_00000.raw /home/data/km0921/raw/wh300/km2009_257_07200.raw /home/data/km0921/raw/wh300/km2009_257_14400.raw /home/data/km0921/raw/wh300/km2009_257_21600.raw /home/data/km0921/raw/wh300/km2009_257_28800.raw /home/data/km0921/raw/wh300/km2009_257_36000.raw /home/data/km0921/raw/wh300/km2009_257_43200.raw /home/data/km0921/raw/wh300/km2009_257_50400.raw /home/data/km0921/raw/wh300/km2009_257_57600.raw /home/data/km0921/raw/wh300/km2009_257_64800.raw /home/data/km0921/raw/wh300/km2009_257_72000.raw /home/data/km0921/raw/wh300/km2009_257_79200.raw /home/data/km0921/raw/wh300/km2009_258_00000.raw /home/data/km0921/raw/wh300/km2009_258_07200.raw /home/data/km0921/raw/wh300/km2009_258_14400.raw /home/data/km0921/raw/wh300/km2009_258_21600.raw /home/data/km0921/raw/wh300/km2009_258_28800.raw /home/data/km0921/raw/wh300/km2009_258_36000.raw /home/data/km0921/raw/wh300/km2009_258_43200.raw /home/data/km0921/raw/wh300/km2009_258_50400.raw 2009-09-16 15:56:12,744 DEBUG quick_adcp Wed Sep 16 15:56:12 2009 running quick_adcp.py as follows: --cntfile /home/data/km0921/proc/wh300/wh300_qpy.cnt ----- adcpsect variables ------ afilebase a_km cbasename contour dbname a_km dbpath ../adcpdb deeper_boundaries [40, 60, 80, 100, 120] firstdepth 15 gridnum 80 increment 2 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2009 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 0.018 adjust_time 1 afilebase a_km allow_reload True auto True beamangle 20 bindir /home/currents/programs/codas3/bin/lnx binos lnx btrk_step 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lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = wh; instname = 'wh300'; pingtype = 'bb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'km0921',... 'cfgpath' , '/home/data/km0921/proc/wh300/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 mplplots ['temp', 'nav', 'refl', 'hcorr', 'wtcal', 'btcal'] nosave_editcfg 0 npycalc ['refsm'] num_persistence 24 numbins 128 orig_fixfile a_km.gps overview False pgmin 50 ping_headcorr True pingtype bb post_headcorr False printformats png proc_yearbase 2009 procdir wh300 progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/km0921/raw/wh300/km2009_234_64397.raw', '/home/data/km0921/raw/wh300/km2009_234_64800.raw', '/home/data/km0921/raw/wh300/km2009_234_72000.raw', '/home/data/km0921/raw/wh300/km2009_234_78778.raw', '/home/data/km0921/raw/wh300/km2009_234_79200.raw', '/home/data/km0921/raw/wh300/km2009_235_00000.raw', 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'/home/data/km0921/raw/wh300/km2009_257_21600.raw', '/home/data/km0921/raw/wh300/km2009_257_28800.raw', '/home/data/km0921/raw/wh300/km2009_257_36000.raw', '/home/data/km0921/raw/wh300/km2009_257_43200.raw', '/home/data/km0921/raw/wh300/km2009_257_50400.raw', '/home/data/km0921/raw/wh300/km2009_257_57600.raw', '/home/data/km0921/raw/wh300/km2009_257_64800.raw', '/home/data/km0921/raw/wh300/km2009_257_72000.raw', '/home/data/km0921/raw/wh300/km2009_257_79200.raw', '/home/data/km0921/raw/wh300/km2009_258_00000.raw', '/home/data/km0921/raw/wh300/km2009_258_07200.raw', '/home/data/km0921/raw/wh300/km2009_258_14400.raw', '/home/data/km0921/raw/wh300/km2009_258_21600.raw', '/home/data/km0921/raw/wh300/km2009_258_28800.raw', '/home/data/km0921/raw/wh300/km2009_258_36000.raw', '/home/data/km0921/raw/wh300/km2009_258_43200.raw', '/home/data/km0921/raw/wh300/km2009_258_50400.raw'] setup_info False skip_avg True smfile a_km_refsm.asc steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2009 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-09-16 15:56:12,744 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2009-09-16 15:56:12,745 DEBUG quick_run scanning files for time ranges... 2009-09-16 15:56:12,745 DEBUG quick_setup starting in /home/data/km0921/proc/wh300/scan 2009-09-16 15:56:12,745 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/scan 2009-09-16 15:56:12,745 DEBUG quick_setup running python command "scanraw" 2009-09-16 15:56:12,746 DEBUG call_matlab --> clear all 2009-09-16 15:56:12,750 DEBUG call_matlab <-- >> 2009-09-16 15:56:12,750 DEBUG call_matlab --> close all 2009-09-16 15:56:12,810 DEBUG call_matlab <-- >> 2009-09-16 15:56:12,810 DEBUG call_matlab --> cd /home/data/km0921/proc/wh300/scan 2009-09-16 15:56:12,813 DEBUG call_matlab <-- >> 2009-09-16 15:56:12,813 DEBUG call_matlab --> scan_tmp 2009-09-16 15:56:13,779 DEBUG call_matlab <-- getting config files from "/home/data/km0921/proc/wh300/config" running "km0921_cfg.m" running "km0921_proc.m" writing scan info to a_km.scn >> 2009-09-16 15:56:13,793 DEBUG quick_run writing time range from a_km.scn to a_km.tr 2009-09-16 15:56:13,793 DEBUG quick_run getting scan time range 2009-09-16 15:56:13,793 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,794 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/scan 2009-09-16 15:56:13,794 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,795 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,796 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,798 DEBUG quick_subs start_end_time 2009/08/23 17:53:19 to 2009/09/16 15:55:59 2009-09-16 15:56:13,798 DEBUG quick_subs dd0: 234.745359 dd1: 258.663877 2009-09-16 15:56:13,799 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/km0921/proc/wh300 2009-09-16 15:56:13,799 DEBUG quick_adcp looking for database with adcpdb/a_km*.blk 2009-09-16 15:56:13,801 DEBUG quick_adcp database found: listing blocks 2009-09-16 15:56:13,810 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:56:13,811 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:56:13,811 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:56:13,812 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:56:13,840 DEBUG quick_subs database passes. 2009-09-16 15:56:13,840 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:13,841 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,841 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,841 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,841 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,845 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,845 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,846 DEBUG quick_subs dd0: 234.746771 dd1: 258.642338 2009-09-16 15:56:13,846 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:13,846 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,846 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,847 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,847 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,851 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,851 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,851 DEBUG quick_subs dd0: 234.746771 dd1: 258.642338 2009-09-16 15:56:13,852 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2009-09-16 15:56:13,852 DEBUG quick_adcp origdb_time_range is 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,852 DEBUG quick_adcp (234.746771 to 258.642338) 2009-09-16 15:56:13,853 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2009-09-16 15:56:13,855 DEBUG quick_subs getting current (remaining after deletion) database times 2009-09-16 15:56:13,855 DEBUG quick_subs ['adcpdb/a_km039.blk', 'adcpdb/a_km033.blk', 'adcpdb/a_km093.blk', 'adcpdb/a_km099.blk', 'adcpdb/a_km098.blk', 'adcpdb/a_km073.blk', 'adcpdb/a_km022.blk', 'adcpdb/a_km062.blk', 'adcpdb/a_km088.blk', 'adcpdb/a_km041.blk', 'adcpdb/a_km046.blk', 'adcpdb/a_km103.blk', 'adcpdb/a_km050.blk', 'adcpdb/a_km051.blk', 'adcpdb/a_km017.blk', 'adcpdb/a_km014.blk', 'adcpdb/a_km096.blk', 'adcpdb/a_km078.blk', 'adcpdb/a_km047.blk', 'adcpdb/a_km084.blk', 'adcpdb/a_km100.blk', 'adcpdb/a_km108.blk', 'adcpdb/a_km069.blk', 'adcpdb/a_km081.blk', 'adcpdb/a_km074.blk', 'adcpdb/a_km031.blk', 'adcpdb/a_km059.blk', 'adcpdb/a_km058.blk', 'adcpdb/a_km086.blk', 'adcpdb/a_km045.blk', 'adcpdb/a_km021.blk', 'adcpdb/a_km003.blk', 'adcpdb/a_km063.blk', 'adcpdb/a_km082.blk', 'adcpdb/a_km011.blk', 'adcpdb/a_km037.blk', 'adcpdb/a_km056.blk', 'adcpdb/a_km018.blk', 'adcpdb/a_km009.blk', 'adcpdb/a_km015.blk', 'adcpdb/a_km049.blk', 'adcpdb/a_km071.blk', 'adcpdb/a_km068.blk', 'adcpdb/a_km038.blk', 'adcpdb/a_km025.blk', 'adcpdb/a_km076.blk', 'adcpdb/a_km080.blk', 'adcpdb/a_kmdir.blk', 'adcpdb/a_km030.blk', 'adcpdb/a_km002.blk', 'adcpdb/a_km097.blk', 'adcpdb/a_km034.blk', 'adcpdb/a_km077.blk', 'adcpdb/a_km052.blk', 'adcpdb/a_km065.blk', 'adcpdb/a_km101.blk', 'adcpdb/a_km115.blk', 'adcpdb/a_km057.blk', 'adcpdb/a_km109.blk', 'adcpdb/a_km008.blk', 'adcpdb/a_km114.blk', 'adcpdb/a_km112.blk', 'adcpdb/a_km048.blk', 'adcpdb/a_km027.blk', 'adcpdb/a_km054.blk', 'adcpdb/a_km044.blk', 'adcpdb/a_km042.blk', 'adcpdb/a_km035.blk', 'adcpdb/a_km107.blk', 'adcpdb/a_km111.blk', 'adcpdb/a_km090.blk', 'adcpdb/a_km118.blk', 'adcpdb/a_km040.blk', 'adcpdb/a_km102.blk', 'adcpdb/a_km001.blk', 'adcpdb/a_km072.blk', 'adcpdb/a_km010.blk', 'adcpdb/a_km094.blk', 'adcpdb/a_km092.blk', 'adcpdb/a_km032.blk', 'adcpdb/a_km067.blk', 'adcpdb/a_km007.blk', 'adcpdb/a_km055.blk', 'adcpdb/a_km028.blk', 'adcpdb/a_km085.blk', 'adcpdb/a_km075.blk', 'adcpdb/a_km113.blk', 'adcpdb/a_km036.blk', 'adcpdb/a_km110.blk', 'adcpdb/a_km004.blk', 'adcpdb/a_km105.blk', 'adcpdb/a_km019.blk', 'adcpdb/a_km089.blk', 'adcpdb/a_km083.blk', 'adcpdb/a_km106.blk', 'adcpdb/a_km064.blk', 'adcpdb/a_km070.blk', 'adcpdb/a_km091.blk', 'adcpdb/a_km012.blk', 'adcpdb/a_km061.blk', 'adcpdb/a_km005.blk', 'adcpdb/a_km024.blk', 'adcpdb/a_km020.blk', 'adcpdb/a_km043.blk', 'adcpdb/a_km117.blk', 'adcpdb/a_km104.blk', 'adcpdb/a_km016.blk', 'adcpdb/a_km013.blk', 'adcpdb/a_km053.blk', 'adcpdb/a_km116.blk', 'adcpdb/a_km006.blk', 'adcpdb/a_km079.blk', 'adcpdb/a_km023.blk', 'adcpdb/a_km066.blk', 'adcpdb/a_km026.blk', 'adcpdb/a_km095.blk', 'adcpdb/a_km087.blk', 'adcpdb/a_km060.blk', 'adcpdb/a_km029.blk'] 2009-09-16 15:56:13,855 DEBUG quick_subs length is 119 2009-09-16 15:56:13,856 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:56:13,857 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:56:13,858 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:56:13,858 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:56:13,889 DEBUG quick_subs database passes. 2009-09-16 15:56:13,889 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:13,889 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,890 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,890 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,890 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,894 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,894 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,895 DEBUG quick_subs dd0: 234.746771 dd1: 258.642338 2009-09-16 15:56:13,895 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,895 DEBUG quick_subs reading time range 2009-09-16 15:56:13,896 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,896 DEBUG quick_subs dd0: 234.746771 dd1: 258.642338 2009-09-16 15:56:13,898 INFO quick_subs Wed Sep 16 15:56:13 2009 2009-09-16 15:56:13,898 INFO quick_subs checking database time range by listblk 2009-09-16 15:56:13,899 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:56:13,900 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:56:13,900 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:56:13,901 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:56:13,929 DEBUG quick_subs database passes. 2009-09-16 15:56:13,929 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:13,929 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,930 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,930 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,930 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,934 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,934 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:24:58 2009-09-16 15:56:13,934 DEBUG quick_subs dd0: 234.746771 dd1: 258.642338 2009-09-16 15:56:13,937 INFO quick_subs found line /* 0 n= 118 a_km001.blk */ 2009/08/23 17:55:21 to 2009/08/23 21:51:06 2009-09-16 15:56:13,939 INFO quick_subs found line /* 1 n= 146 a_km002.blk */ 2009/08/23 21:54:59 to 2009/08/24 02:45:21 2009-09-16 15:56:13,939 INFO quick_subs found line /* 2 n= 146 a_km003.blk */ 2009/08/24 02:47:21 to 2009/08/24 07:37:43 2009-09-16 15:56:13,939 INFO quick_subs found line /* 3 n= 146 a_km004.blk */ 2009/08/24 07:39:43 to 2009/08/24 12:30:04 2009-09-16 15:56:13,939 INFO quick_subs found line /* 4 n= 146 a_km005.blk */ 2009/08/24 12:32:05 to 2009/08/24 17:22:26 2009-09-16 15:56:13,940 INFO quick_subs found line /* 5 n= 146 a_km006.blk */ 2009/08/24 17:24:26 to 2009/08/24 22:14:47 2009-09-16 15:56:13,940 INFO quick_subs found line /* 6 n= 146 a_km007.blk */ 2009/08/24 22:16:47 to 2009/08/25 03:07:09 2009-09-16 15:56:13,940 INFO quick_subs found line /* 7 n= 146 a_km008.blk */ 2009/08/25 03:09:09 to 2009/08/25 07:59:30 2009-09-16 15:56:13,940 INFO quick_subs found line /* 8 n= 146 a_km009.blk */ 2009/08/25 08:01:30 to 2009/08/25 12:51:52 2009-09-16 15:56:13,941 INFO quick_subs found line /* 9 n= 146 a_km010.blk */ 2009/08/25 12:53:52 to 2009/08/25 17:46:14 2009-09-16 15:56:13,941 INFO quick_subs found line /* 10 n= 146 a_km011.blk */ 2009/08/25 17:48:14 to 2009/08/25 22:40:35 2009-09-16 15:56:13,941 INFO quick_subs found line /* 11 n= 146 a_km012.blk */ 2009/08/25 22:42:36 to 2009/08/26 03:34:57 2009-09-16 15:56:13,941 INFO quick_subs found line /* 12 n= 146 a_km013.blk */ 2009/08/26 03:36:57 to 2009/08/26 08:27:18 2009-09-16 15:56:13,941 INFO quick_subs found line /* 13 n= 146 a_km014.blk */ 2009/08/26 08:29:19 to 2009/08/26 13:19:40 2009-09-16 15:56:13,942 INFO quick_subs found line /* 14 n= 146 a_km015.blk */ 2009/08/26 13:21:40 to 2009/08/26 18:14:01 2009-09-16 15:56:13,942 INFO quick_subs found line /* 15 n= 146 a_km016.blk */ 2009/08/26 18:16:01 to 2009/08/26 23:08:23 2009-09-16 15:56:13,942 INFO quick_subs found line /* 16 n= 146 a_km017.blk */ 2009/08/26 23:10:23 to 2009/08/27 04:00:45 2009-09-16 15:56:13,942 INFO quick_subs found line /* 17 n= 146 a_km018.blk */ 2009/08/27 04:02:45 to 2009/08/27 08:53:07 2009-09-16 15:56:13,942 INFO quick_subs found line /* 18 n= 146 a_km019.blk */ 2009/08/27 08:55:07 to 2009/08/27 13:45:28 2009-09-16 15:56:13,943 INFO quick_subs found line /* 19 n= 146 a_km020.blk */ 2009/08/27 13:47:28 to 2009/08/27 18:37:49 2009-09-16 15:56:13,943 INFO quick_subs found line /* 20 n= 146 a_km021.blk */ 2009/08/27 18:39:50 to 2009/08/27 23:30:11 2009-09-16 15:56:13,943 INFO quick_subs found line /* 21 n= 146 a_km022.blk */ 2009/08/27 23:32:11 to 2009/08/28 04:22:32 2009-09-16 15:56:13,943 INFO quick_subs found line /* 22 n= 146 a_km023.blk */ 2009/08/28 04:24:32 to 2009/08/28 09:14:54 2009-09-16 15:56:13,944 INFO quick_subs found line /* 23 n= 146 a_km024.blk */ 2009/08/28 09:16:55 to 2009/08/28 14:07:16 2009-09-16 15:56:13,944 INFO quick_subs found line /* 24 n= 146 a_km025.blk */ 2009/08/28 14:09:16 to 2009/08/28 18:59:37 2009-09-16 15:56:13,944 INFO quick_subs found line /* 25 n= 146 a_km026.blk */ 2009/08/28 19:01:37 to 2009/08/28 23:51:59 2009-09-16 15:56:13,944 INFO quick_subs found line /* 26 n= 146 a_km027.blk */ 2009/08/28 23:53:59 to 2009/08/29 04:44:20 2009-09-16 15:56:13,944 INFO quick_subs found line /* 27 n= 146 a_km028.blk */ 2009/08/29 04:46:20 to 2009/08/29 09:36:42 2009-09-16 15:56:13,945 INFO quick_subs found line /* 28 n= 146 a_km029.blk */ 2009/08/29 09:38:42 to 2009/08/29 14:29:04 2009-09-16 15:56:13,945 INFO quick_subs found line /* 29 n= 146 a_km030.blk */ 2009/08/29 14:31:04 to 2009/08/29 19:21:25 2009-09-16 15:56:13,945 INFO quick_subs found line /* 30 n= 146 a_km031.blk */ 2009/08/29 19:23:25 to 2009/08/30 00:15:47 2009-09-16 15:56:13,945 INFO quick_subs found line /* 31 n= 146 a_km032.blk */ 2009/08/30 00:17:47 to 2009/08/30 05:08:08 2009-09-16 15:56:13,945 INFO quick_subs found line /* 32 n= 146 a_km033.blk */ 2009/08/30 05:10:08 to 2009/08/30 10:00:29 2009-09-16 15:56:13,946 INFO quick_subs found line /* 33 n= 146 a_km034.blk */ 2009/08/30 10:02:30 to 2009/08/30 14:52:51 2009-09-16 15:56:13,946 INFO quick_subs found line /* 34 n= 146 a_km035.blk */ 2009/08/30 14:54:51 to 2009/08/30 19:45:13 2009-09-16 15:56:13,946 INFO quick_subs found line /* 35 n= 146 a_km036.blk */ 2009/08/30 19:47:13 to 2009/08/31 00:37:35 2009-09-16 15:56:13,946 INFO quick_subs found line /* 36 n= 146 a_km037.blk */ 2009/08/31 00:39:35 to 2009/08/31 05:29:56 2009-09-16 15:56:13,946 INFO quick_subs found line /* 37 n= 146 a_km038.blk */ 2009/08/31 05:31:56 to 2009/08/31 10:24:17 2009-09-16 15:56:13,947 INFO quick_subs found line /* 38 n= 146 a_km039.blk */ 2009/08/31 10:26:18 to 2009/08/31 15:16:39 2009-09-16 15:56:13,947 INFO quick_subs found line /* 39 n= 146 a_km040.blk */ 2009/08/31 15:18:39 to 2009/08/31 20:09:00 2009-09-16 15:56:13,947 INFO quick_subs found line /* 40 n= 146 a_km041.blk */ 2009/08/31 20:11:00 to 2009/09/01 01:01:22 2009-09-16 15:56:13,947 INFO quick_subs found line /* 41 n= 146 a_km042.blk */ 2009/09/01 01:03:22 to 2009/09/01 05:53:44 2009-09-16 15:56:13,948 INFO quick_subs found line /* 42 n= 146 a_km043.blk */ 2009/09/01 05:55:44 to 2009/09/01 10:46:05 2009-09-16 15:56:13,948 INFO quick_subs found line /* 43 n= 146 a_km044.blk */ 2009/09/01 10:48:06 to 2009/09/01 15:38:27 2009-09-16 15:56:13,948 INFO quick_subs found line /* 44 n= 146 a_km045.blk */ 2009/09/01 15:40:27 to 2009/09/01 20:30:48 2009-09-16 15:56:13,948 INFO quick_subs found line /* 45 n= 146 a_km046.blk */ 2009/09/01 20:32:48 to 2009/09/02 01:23:09 2009-09-16 15:56:13,948 INFO quick_subs found line /* 46 n= 146 a_km047.blk */ 2009/09/02 01:25:10 to 2009/09/02 06:15:31 2009-09-16 15:56:13,949 INFO quick_subs found line /* 47 n= 146 a_km048.blk */ 2009/09/02 06:17:31 to 2009/09/02 11:07:53 2009-09-16 15:56:13,949 INFO quick_subs found line /* 48 n= 146 a_km049.blk */ 2009/09/02 11:09:53 to 2009/09/02 16:00:15 2009-09-16 15:56:13,949 INFO quick_subs found line /* 49 n= 146 a_km050.blk */ 2009/09/02 16:02:15 to 2009/09/02 20:52:36 2009-09-16 15:56:13,949 INFO quick_subs found line /* 50 n= 146 a_km051.blk */ 2009/09/02 20:54:36 to 2009/09/03 01:44:57 2009-09-16 15:56:13,949 INFO quick_subs found line /* 51 n= 146 a_km052.blk */ 2009/09/03 01:46:58 to 2009/09/03 06:37:19 2009-09-16 15:56:13,950 INFO quick_subs found line /* 52 n= 146 a_km053.blk */ 2009/09/03 06:39:19 to 2009/09/03 11:29:40 2009-09-16 15:56:13,950 INFO quick_subs found line /* 53 n= 146 a_km054.blk */ 2009/09/03 11:31:40 to 2009/09/03 16:22:02 2009-09-16 15:56:13,950 INFO quick_subs found line /* 54 n= 146 a_km055.blk */ 2009/09/03 16:24:03 to 2009/09/03 21:14:24 2009-09-16 15:56:13,950 INFO quick_subs found line /* 55 n= 146 a_km056.blk */ 2009/09/03 21:16:24 to 2009/09/04 02:06:45 2009-09-16 15:56:13,950 INFO quick_subs found line /* 56 n= 146 a_km057.blk */ 2009/09/04 02:08:45 to 2009/09/04 06:59:07 2009-09-16 15:56:13,951 INFO quick_subs found line /* 57 n= 146 a_km058.blk */ 2009/09/04 07:01:07 to 2009/09/04 11:51:28 2009-09-16 15:56:13,951 INFO quick_subs found line /* 58 n= 146 a_km059.blk */ 2009/09/04 11:53:28 to 2009/09/04 16:43:50 2009-09-16 15:56:13,951 INFO quick_subs found line /* 59 n= 146 a_km060.blk */ 2009/09/04 16:45:50 to 2009/09/04 21:36:12 2009-09-16 15:56:13,951 INFO quick_subs found line /* 60 n= 146 a_km061.blk */ 2009/09/04 21:38:12 to 2009/09/05 02:28:33 2009-09-16 15:56:13,952 INFO quick_subs found line /* 61 n= 146 a_km062.blk */ 2009/09/05 02:30:33 to 2009/09/05 07:20:54 2009-09-16 15:56:13,952 INFO quick_subs found line /* 62 n= 146 a_km063.blk */ 2009/09/05 07:22:55 to 2009/09/05 12:13:16 2009-09-16 15:56:13,952 INFO quick_subs found line /* 63 n= 146 a_km064.blk */ 2009/09/05 12:15:16 to 2009/09/05 17:05:37 2009-09-16 15:56:13,952 INFO quick_subs found line /* 64 n= 146 a_km065.blk */ 2009/09/05 17:07:37 to 2009/09/05 21:57:59 2009-09-16 15:56:13,952 INFO quick_subs found line /* 65 n= 146 a_km066.blk */ 2009/09/05 21:59:59 to 2009/09/06 02:50:21 2009-09-16 15:56:13,953 INFO quick_subs found line /* 66 n= 146 a_km067.blk */ 2009/09/06 02:52:21 to 2009/09/06 07:42:42 2009-09-16 15:56:13,953 INFO quick_subs found line /* 67 n= 146 a_km068.blk */ 2009/09/06 07:44:43 to 2009/09/06 12:35:04 2009-09-16 15:56:13,953 INFO quick_subs found line /* 68 n= 146 a_km069.blk */ 2009/09/06 12:37:04 to 2009/09/06 17:27:25 2009-09-16 15:56:13,953 INFO quick_subs found line /* 69 n= 146 a_km070.blk */ 2009/09/06 17:29:25 to 2009/09/06 22:19:46 2009-09-16 15:56:13,953 INFO quick_subs found line /* 70 n= 146 a_km071.blk */ 2009/09/06 22:21:47 to 2009/09/07 03:12:08 2009-09-16 15:56:13,954 INFO quick_subs found line /* 71 n= 146 a_km072.blk */ 2009/09/07 03:14:08 to 2009/09/07 08:04:30 2009-09-16 15:56:13,954 INFO quick_subs found line /* 72 n= 146 a_km073.blk */ 2009/09/07 08:06:30 to 2009/09/07 12:56:52 2009-09-16 15:56:13,954 INFO quick_subs found line /* 73 n= 146 a_km074.blk */ 2009/09/07 12:58:52 to 2009/09/07 17:49:13 2009-09-16 15:56:13,954 INFO quick_subs found line /* 74 n= 146 a_km075.blk */ 2009/09/07 17:51:13 to 2009/09/07 22:41:34 2009-09-16 15:56:13,954 INFO quick_subs found line /* 75 n= 146 a_km076.blk */ 2009/09/07 22:43:35 to 2009/09/08 03:33:56 2009-09-16 15:56:13,955 INFO quick_subs found line /* 76 n= 146 a_km077.blk */ 2009/09/08 03:35:56 to 2009/09/08 08:28:17 2009-09-16 15:56:13,955 INFO quick_subs found line /* 77 n= 146 a_km078.blk */ 2009/09/08 08:30:17 to 2009/09/08 13:22:39 2009-09-16 15:56:13,955 INFO quick_subs found line /* 78 n= 146 a_km079.blk */ 2009/09/08 13:24:39 to 2009/09/08 18:15:01 2009-09-16 15:56:13,955 INFO quick_subs found line /* 79 n= 146 a_km080.blk */ 2009/09/08 18:17:01 to 2009/09/08 23:07:23 2009-09-16 15:56:13,955 INFO quick_subs found line /* 80 n= 146 a_km081.blk */ 2009/09/08 23:09:23 to 2009/09/09 03:59:44 2009-09-16 15:56:13,956 INFO quick_subs found line /* 81 n= 146 a_km082.blk */ 2009/09/09 04:01:44 to 2009/09/09 08:52:05 2009-09-16 15:56:13,956 INFO quick_subs found line /* 82 n= 146 a_km083.blk */ 2009/09/09 08:54:06 to 2009/09/09 13:44:27 2009-09-16 15:56:13,956 INFO quick_subs found line /* 83 n= 146 a_km084.blk */ 2009/09/09 13:46:27 to 2009/09/09 18:36:49 2009-09-16 15:56:13,956 INFO quick_subs found line /* 84 n= 146 a_km085.blk */ 2009/09/09 18:38:49 to 2009/09/09 23:29:10 2009-09-16 15:56:13,957 INFO quick_subs found line /* 85 n= 146 a_km086.blk */ 2009/09/09 23:31:11 to 2009/09/10 04:21:32 2009-09-16 15:56:13,957 INFO quick_subs found line /* 86 n= 146 a_km087.blk */ 2009/09/10 04:23:32 to 2009/09/10 09:13:53 2009-09-16 15:56:13,957 INFO quick_subs found line /* 87 n= 146 a_km088.blk */ 2009/09/10 09:15:53 to 2009/09/10 14:06:15 2009-09-16 15:56:13,957 INFO quick_subs found line /* 88 n= 146 a_km089.blk */ 2009/09/10 14:08:15 to 2009/09/10 18:58:36 2009-09-16 15:56:13,957 INFO quick_subs found line /* 89 n= 146 a_km090.blk */ 2009/09/10 19:00:36 to 2009/09/10 23:50:58 2009-09-16 15:56:13,958 INFO quick_subs found line /* 90 n= 146 a_km091.blk */ 2009/09/10 23:52:58 to 2009/09/11 04:43:20 2009-09-16 15:56:13,958 INFO quick_subs found line /* 91 n= 146 a_km092.blk */ 2009/09/11 04:45:20 to 2009/09/11 09:35:41 2009-09-16 15:56:13,958 INFO quick_subs found line /* 92 n= 146 a_km093.blk */ 2009/09/11 09:37:41 to 2009/09/11 14:28:02 2009-09-16 15:56:13,958 INFO quick_subs found line /* 93 n= 146 a_km094.blk */ 2009/09/11 14:30:03 to 2009/09/11 19:20:24 2009-09-16 15:56:13,958 INFO quick_subs found line /* 94 n= 146 a_km095.blk */ 2009/09/11 19:22:24 to 2009/09/12 00:12:46 2009-09-16 15:56:13,959 INFO quick_subs found line /* 95 n= 146 a_km096.blk */ 2009/09/12 00:14:46 to 2009/09/12 05:05:08 2009-09-16 15:56:13,959 INFO quick_subs found line /* 96 n= 146 a_km097.blk */ 2009/09/12 05:07:08 to 2009/09/12 09:57:29 2009-09-16 15:56:13,959 INFO quick_subs found line /* 97 n= 146 a_km098.blk */ 2009/09/12 09:59:29 to 2009/09/12 14:49:50 2009-09-16 15:56:13,959 INFO quick_subs found line /* 98 n= 146 a_km099.blk */ 2009/09/12 14:51:51 to 2009/09/12 19:42:12 2009-09-16 15:56:13,959 INFO quick_subs found line /* 99 n= 146 a_km100.blk */ 2009/09/12 19:44:12 to 2009/09/13 00:34:33 2009-09-16 15:56:13,960 INFO quick_subs found line /* 100 n= 146 a_km101.blk */ 2009/09/13 00:36:33 to 2009/09/13 05:26:55 2009-09-16 15:56:13,960 INFO quick_subs found line /* 101 n= 146 a_km102.blk */ 2009/09/13 05:28:55 to 2009/09/13 10:19:17 2009-09-16 15:56:13,960 INFO quick_subs found line /* 102 n= 146 a_km103.blk */ 2009/09/13 10:21:17 to 2009/09/13 15:11:38 2009-09-16 15:56:13,960 INFO quick_subs found line /* 103 n= 146 a_km104.blk */ 2009/09/13 15:13:38 to 2009/09/13 20:04:00 2009-09-16 15:56:13,960 INFO quick_subs found line /* 104 n= 146 a_km105.blk */ 2009/09/13 20:06:00 to 2009/09/14 00:56:21 2009-09-16 15:56:13,961 INFO quick_subs found line /* 105 n= 146 a_km106.blk */ 2009/09/14 00:58:21 to 2009/09/14 05:48:42 2009-09-16 15:56:13,961 INFO quick_subs found line /* 106 n= 146 a_km107.blk */ 2009/09/14 05:50:43 to 2009/09/14 10:41:05 2009-09-16 15:56:13,961 INFO quick_subs found line /* 107 n= 146 a_km108.blk */ 2009/09/14 10:43:05 to 2009/09/14 15:33:26 2009-09-16 15:56:13,961 INFO quick_subs found line /* 108 n= 146 a_km109.blk */ 2009/09/14 15:35:26 to 2009/09/14 20:25:47 2009-09-16 15:56:13,962 INFO quick_subs found line /* 109 n= 146 a_km110.blk */ 2009/09/14 20:27:48 to 2009/09/15 01:18:09 2009-09-16 15:56:13,962 INFO quick_subs found line /* 110 n= 146 a_km111.blk */ 2009/09/15 01:20:09 to 2009/09/15 06:10:30 2009-09-16 15:56:13,962 INFO quick_subs found line /* 111 n= 146 a_km112.blk */ 2009/09/15 06:12:30 to 2009/09/15 11:02:52 2009-09-16 15:56:13,962 INFO quick_subs found line /* 112 n= 146 a_km113.blk */ 2009/09/15 11:04:52 to 2009/09/15 15:55:14 2009-09-16 15:56:13,962 INFO quick_subs found line /* 113 n= 146 a_km114.blk */ 2009/09/15 15:57:14 to 2009/09/15 20:47:35 2009-09-16 15:56:13,963 INFO quick_subs found line /* 114 n= 146 a_km115.blk */ 2009/09/15 20:49:36 to 2009/09/16 01:39:57 2009-09-16 15:56:13,963 INFO quick_subs found line /* 115 n= 146 a_km116.blk */ 2009/09/16 01:41:57 to 2009/09/16 06:34:18 2009-09-16 15:56:13,963 INFO quick_subs found line /* 116 n= 146 a_km117.blk */ 2009/09/16 06:36:18 to 2009/09/16 11:26:40 2009-09-16 15:56:13,963 INFO quick_subs found line /* 117 n= 119 a_km118.blk */ 2009/09/16 11:28:40 to 2009/09/16 15:24:58 2009-09-16 15:56:13,964 INFO quick_subs scan data start at 234.7453588 2009-09-16 15:56:13,964 INFO quick_subs scan time range: 2009/08/23 17:53:19 to 2009/09/16 15:55:59 2009-09-16 15:56:13,964 INFO quick_subs codasdb ends at 258.6423380 (2009/09/16 15:24:58) 2009-09-16 15:56:13,964 DEBUG quick_subs ... changed dirs, in /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,965 DEBUG quick_subs deleting these files: ['a_km118.blk'] 2009-09-16 15:56:13,966 DEBUG quick_subs getting current (remaining after deletion) database times 2009-09-16 15:56:13,967 DEBUG quick_subs ['adcpdb/a_km039.blk', 'adcpdb/a_km033.blk', 'adcpdb/a_km093.blk', 'adcpdb/a_km099.blk', 'adcpdb/a_km098.blk', 'adcpdb/a_km073.blk', 'adcpdb/a_km022.blk', 'adcpdb/a_km062.blk', 'adcpdb/a_km088.blk', 'adcpdb/a_km041.blk', 'adcpdb/a_km046.blk', 'adcpdb/a_km103.blk', 'adcpdb/a_km050.blk', 'adcpdb/a_km051.blk', 'adcpdb/a_km017.blk', 'adcpdb/a_km014.blk', 'adcpdb/a_km096.blk', 'adcpdb/a_km078.blk', 'adcpdb/a_km047.blk', 'adcpdb/a_km084.blk', 'adcpdb/a_km100.blk', 'adcpdb/a_km108.blk', 'adcpdb/a_km069.blk', 'adcpdb/a_km081.blk', 'adcpdb/a_km074.blk', 'adcpdb/a_km031.blk', 'adcpdb/a_km059.blk', 'adcpdb/a_km058.blk', 'adcpdb/a_km086.blk', 'adcpdb/a_km045.blk', 'adcpdb/a_km021.blk', 'adcpdb/a_km003.blk', 'adcpdb/a_km063.blk', 'adcpdb/a_km082.blk', 'adcpdb/a_km011.blk', 'adcpdb/a_km037.blk', 'adcpdb/a_km056.blk', 'adcpdb/a_km018.blk', 'adcpdb/a_km009.blk', 'adcpdb/a_km015.blk', 'adcpdb/a_km049.blk', 'adcpdb/a_km071.blk', 'adcpdb/a_km068.blk', 'adcpdb/a_km038.blk', 'adcpdb/a_km025.blk', 'adcpdb/a_km076.blk', 'adcpdb/a_km080.blk', 'adcpdb/a_km030.blk', 'adcpdb/a_km002.blk', 'adcpdb/a_km097.blk', 'adcpdb/a_km034.blk', 'adcpdb/a_km077.blk', 'adcpdb/a_km052.blk', 'adcpdb/a_km065.blk', 'adcpdb/a_km101.blk', 'adcpdb/a_km115.blk', 'adcpdb/a_km057.blk', 'adcpdb/a_km109.blk', 'adcpdb/a_km008.blk', 'adcpdb/a_km114.blk', 'adcpdb/a_km112.blk', 'adcpdb/a_km048.blk', 'adcpdb/a_km027.blk', 'adcpdb/a_km054.blk', 'adcpdb/a_km044.blk', 'adcpdb/a_km042.blk', 'adcpdb/a_km035.blk', 'adcpdb/a_km107.blk', 'adcpdb/a_km111.blk', 'adcpdb/a_km090.blk', 'adcpdb/a_km040.blk', 'adcpdb/a_km102.blk', 'adcpdb/a_km001.blk', 'adcpdb/a_km072.blk', 'adcpdb/a_km010.blk', 'adcpdb/a_km094.blk', 'adcpdb/a_km092.blk', 'adcpdb/a_km032.blk', 'adcpdb/a_km067.blk', 'adcpdb/a_km007.blk', 'adcpdb/a_km055.blk', 'adcpdb/a_km028.blk', 'adcpdb/a_km085.blk', 'adcpdb/a_km075.blk', 'adcpdb/a_km113.blk', 'adcpdb/a_km036.blk', 'adcpdb/a_km110.blk', 'adcpdb/a_km004.blk', 'adcpdb/a_km105.blk', 'adcpdb/a_km019.blk', 'adcpdb/a_km089.blk', 'adcpdb/a_km083.blk', 'adcpdb/a_km106.blk', 'adcpdb/a_km064.blk', 'adcpdb/a_km070.blk', 'adcpdb/a_km091.blk', 'adcpdb/a_km012.blk', 'adcpdb/a_km061.blk', 'adcpdb/a_km005.blk', 'adcpdb/a_km024.blk', 'adcpdb/a_km020.blk', 'adcpdb/a_km043.blk', 'adcpdb/a_km117.blk', 'adcpdb/a_km104.blk', 'adcpdb/a_km016.blk', 'adcpdb/a_km013.blk', 'adcpdb/a_km053.blk', 'adcpdb/a_km116.blk', 'adcpdb/a_km006.blk', 'adcpdb/a_km079.blk', 'adcpdb/a_km023.blk', 'adcpdb/a_km066.blk', 'adcpdb/a_km026.blk', 'adcpdb/a_km095.blk', 'adcpdb/a_km087.blk', 'adcpdb/a_km060.blk', 'adcpdb/a_km029.blk'] 2009-09-16 15:56:13,967 DEBUG quick_subs length is 117 2009-09-16 15:56:13,968 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:56:13,968 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:56:13,968 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:56:13,992 DEBUG quick_subs database passes. 2009-09-16 15:56:13,992 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:13,993 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:13,993 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:13,993 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:13,993 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,997 DEBUG quick_subs extracting time range 2009-09-16 15:56:13,998 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 11:26:40 2009-09-16 15:56:13,998 DEBUG quick_subs dd0: 234.746771 dd1: 258.476852 2009-09-16 15:56:13,998 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:13,998 DEBUG quick_subs reading time range 2009-09-16 15:56:13,999 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 11:26:40 2009-09-16 15:56:13,999 DEBUG quick_subs dd0: 234.746771 dd1: 258.476852 2009-09-16 15:56:13,999 DEBUG quick_subs codas database currently goes from 2009/08/23 17:55:21 to 2009/09/16 11:26:40 2009-09-16 15:56:13,999 DEBUG quick_subs (234.746771 to 258.476852) 2009-09-16 15:56:14,001 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019found existing adcpdb blocks: %s 020found existing adcpdb blocks: %s 021found existing adcpdb blocks: %s 022found existing adcpdb blocks: %s 023found existing adcpdb blocks: %s 024found existing adcpdb blocks: %s 025found existing adcpdb blocks: %s 026found existing adcpdb blocks: %s 027found existing adcpdb blocks: %s 028found existing adcpdb blocks: %s 029found existing adcpdb blocks: %s 030found existing adcpdb blocks: %s 031found existing adcpdb blocks: %s 032found existing adcpdb blocks: %s 033found existing adcpdb blocks: %s 034found existing adcpdb blocks: %s 035found existing adcpdb blocks: %s 036found existing adcpdb blocks: %s 037found existing adcpdb blocks: %s 038found existing adcpdb blocks: %s 039found existing adcpdb blocks: %s 040found existing adcpdb blocks: %s 041found existing adcpdb blocks: %s 042found existing adcpdb blocks: %s 043found existing adcpdb blocks: %s 044found existing adcpdb blocks: %s 045found existing adcpdb blocks: %s 046found existing adcpdb blocks: %s 047found existing adcpdb blocks: %s 048found existing adcpdb blocks: %s 049found existing adcpdb blocks: %s 050found existing adcpdb blocks: %s 051found existing adcpdb blocks: %s 052found existing adcpdb blocks: %s 053found existing adcpdb blocks: %s 054found existing adcpdb blocks: %s 055found existing adcpdb blocks: %s 056found existing adcpdb blocks: %s 057found existing adcpdb blocks: %s 058found existing adcpdb blocks: %s 059found existing adcpdb blocks: %s 060found existing adcpdb blocks: %s 061found existing adcpdb blocks: %s 062found existing adcpdb blocks: %s 063found existing adcpdb blocks: %s 064found existing adcpdb blocks: %s 065found existing adcpdb blocks: %s 066found existing adcpdb blocks: %s 067found existing adcpdb blocks: %s 068found existing adcpdb blocks: %s 069found existing adcpdb blocks: %s 070found existing adcpdb blocks: %s 071found existing adcpdb blocks: %s 072found existing adcpdb blocks: %s 073found existing adcpdb blocks: %s 074found existing adcpdb blocks: %s 075found existing adcpdb blocks: %s 076found existing adcpdb blocks: %s 077found existing adcpdb blocks: %s 078found existing adcpdb blocks: %s 079found existing adcpdb blocks: %s 080found existing adcpdb blocks: %s 081found existing adcpdb blocks: %s 082found existing adcpdb blocks: %s 083found existing adcpdb blocks: %s 084found existing adcpdb blocks: %s 085found existing adcpdb blocks: %s 086found existing adcpdb blocks: %s 087found existing adcpdb blocks: %s 088found existing adcpdb blocks: %s 089found existing adcpdb blocks: %s 090found existing adcpdb blocks: %s 091found existing adcpdb blocks: %s 092found existing adcpdb blocks: %s 093found existing adcpdb blocks: %s 094found existing adcpdb blocks: %s 095found existing adcpdb blocks: %s 096found existing adcpdb blocks: %s 097found existing adcpdb blocks: %s 098found existing adcpdb blocks: %s 099found existing adcpdb blocks: %s 100found existing adcpdb blocks: %s 101found existing adcpdb blocks: %s 102found existing adcpdb blocks: %s 103found existing adcpdb blocks: %s 104found existing adcpdb blocks: %s 105found existing adcpdb blocks: %s 106found existing adcpdb blocks: %s 107found existing adcpdb blocks: %s 108found existing adcpdb blocks: %s 109found existing adcpdb blocks: %s 110found existing adcpdb blocks: %s 111found existing adcpdb blocks: %s 112found existing adcpdb blocks: %s 113found existing adcpdb blocks: %s 114found existing adcpdb blocks: %s 115found existing adcpdb blocks: %s 116found existing adcpdb blocks: %s 117 2009-09-16 15:56:14,004 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 021 022 023 024 025 026 027 028 029 030 031 032 033 034 035 036 037 038 039 040 041 042 043 044 045 046 047 048 049 050 051 052 053 054 055 056 057 058 059 060 061 062 063 064 065 066 067 068 069 070 071 072 073 074 075 076 077 078 079 080 081 082 083 084 085 086 087 088 089 090 091 092 093 094 095 096 097 098 099 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 2009-09-16 15:56:14,005 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047', '048', '049', '050', '051', '052', '053', '054', '055', '056', '057', '058', '059', '060', '061', '062', '063', '064', '065', '066', '067', '068', '069', '070', '071', '072', '073', '074', '075', '076', '077', '078', '079', '080', '081', '082', '083', '084', '085', '086', '087', '088', '089', '090', '091', '092', '093', '094', '095', '096', '097', '098', '099', '100', '101', '102', '103', '104', '105', '106', '107', '108', '109', '110', '111', '112', '113', '114', '115', '116', '117'] 2009-09-16 15:56:14,005 DEBUG quick_subs checked: unloaded blkstrs: ['118'] 2009-09-16 15:56:14,005 DEBUG quick_subs first unloaded file is load/ens_blk118.cmd 2009-09-16 15:56:14,006 DEBUG quick_subs data goes from 2009/09/16 11:28:40 to 2009/09/16 15:55:59 2009-09-16 15:56:14,007 DEBUG quick_subs (258.478241 to 258.663877) 2009-09-16 15:56:14,007 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/wh300/km2009_234_64397.raw /home/data/km0921/raw/wh300/km2009_234_64800.raw /home/data/km0921/raw/wh300/km2009_234_72000.raw /home/data/km0921/raw/wh300/km2009_234_78778.raw /home/data/km0921/raw/wh300/km2009_234_79200.raw /home/data/km0921/raw/wh300/km2009_235_00000.raw /home/data/km0921/raw/wh300/km2009_235_07200.raw /home/data/km0921/raw/wh300/km2009_235_14400.raw /home/data/km0921/raw/wh300/km2009_235_21600.raw /home/data/km0921/raw/wh300/km2009_235_28800.raw /home/data/km0921/raw/wh300/km2009_235_36000.raw /home/data/km0921/raw/wh300/km2009_235_43200.raw /home/data/km0921/raw/wh300/km2009_235_50400.raw /home/data/km0921/raw/wh300/km2009_235_57600.raw /home/data/km0921/raw/wh300/km2009_235_64800.raw /home/data/km0921/raw/wh300/km2009_235_72000.raw /home/data/km0921/raw/wh300/km2009_235_79200.raw /home/data/km0921/raw/wh300/km2009_236_00000.raw /home/data/km0921/raw/wh300/km2009_236_07200.raw /home/data/km0921/raw/wh300/km2009_236_14400.raw /home/data/km0921/raw/wh300/km2009_236_21600.raw /home/data/km0921/raw/wh300/km2009_236_28800.raw /home/data/km0921/raw/wh300/km2009_236_36000.raw /home/data/km0921/raw/wh300/km2009_236_43200.raw /home/data/km0921/raw/wh300/km2009_236_50400.raw /home/data/km0921/raw/wh300/km2009_236_57600.raw /home/data/km0921/raw/wh300/km2009_236_64800.raw /home/data/km0921/raw/wh300/km2009_236_72000.raw /home/data/km0921/raw/wh300/km2009_236_79200.raw /home/data/km0921/raw/wh300/km2009_237_00000.raw /home/data/km0921/raw/wh300/km2009_237_07200.raw /home/data/km0921/raw/wh300/km2009_237_14400.raw 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/home/data/km0921/raw/wh300/km2009_255_50400.raw /home/data/km0921/raw/wh300/km2009_255_57600.raw /home/data/km0921/raw/wh300/km2009_255_64800.raw /home/data/km0921/raw/wh300/km2009_255_72000.raw /home/data/km0921/raw/wh300/km2009_255_79200.raw /home/data/km0921/raw/wh300/km2009_256_00000.raw /home/data/km0921/raw/wh300/km2009_256_07200.raw /home/data/km0921/raw/wh300/km2009_256_14400.raw /home/data/km0921/raw/wh300/km2009_256_21600.raw /home/data/km0921/raw/wh300/km2009_256_28800.raw /home/data/km0921/raw/wh300/km2009_256_36000.raw /home/data/km0921/raw/wh300/km2009_256_43200.raw /home/data/km0921/raw/wh300/km2009_256_50400.raw /home/data/km0921/raw/wh300/km2009_256_57600.raw /home/data/km0921/raw/wh300/km2009_256_64800.raw /home/data/km0921/raw/wh300/km2009_256_72000.raw /home/data/km0921/raw/wh300/km2009_256_79200.raw /home/data/km0921/raw/wh300/km2009_257_00000.raw /home/data/km0921/raw/wh300/km2009_257_07200.raw /home/data/km0921/raw/wh300/km2009_257_14400.raw /home/data/km0921/raw/wh300/km2009_257_21600.raw /home/data/km0921/raw/wh300/km2009_257_28800.raw /home/data/km0921/raw/wh300/km2009_257_36000.raw /home/data/km0921/raw/wh300/km2009_257_43200.raw /home/data/km0921/raw/wh300/km2009_257_50400.raw /home/data/km0921/raw/wh300/km2009_257_57600.raw /home/data/km0921/raw/wh300/km2009_257_64800.raw /home/data/km0921/raw/wh300/km2009_257_72000.raw /home/data/km0921/raw/wh300/km2009_257_79200.raw /home/data/km0921/raw/wh300/km2009_258_00000.raw /home/data/km0921/raw/wh300/km2009_258_07200.raw /home/data/km0921/raw/wh300/km2009_258_14400.raw /home/data/km0921/raw/wh300/km2009_258_21600.raw /home/data/km0921/raw/wh300/km2009_258_28800.raw /home/data/km0921/raw/wh300/km2009_258_36000.raw /home/data/km0921/raw/wh300/km2009_258_43200.raw /home/data/km0921/raw/wh300/km2009_258_50400.raw 2009-09-16 15:56:14,007 INFO quick_run Wed Sep 16 15:56:14 2009 2009-09-16 15:56:14,007 INFO quick_run about to load uhdas files 2009-09-16 15:56:14,008 INFO quick_run 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/home/data/km0921/raw/wh300/km2009_256_21600.raw /home/data/km0921/raw/wh300/km2009_256_28800.raw /home/data/km0921/raw/wh300/km2009_256_36000.raw /home/data/km0921/raw/wh300/km2009_256_43200.raw /home/data/km0921/raw/wh300/km2009_256_50400.raw /home/data/km0921/raw/wh300/km2009_256_57600.raw /home/data/km0921/raw/wh300/km2009_256_64800.raw /home/data/km0921/raw/wh300/km2009_256_72000.raw /home/data/km0921/raw/wh300/km2009_256_79200.raw /home/data/km0921/raw/wh300/km2009_257_00000.raw /home/data/km0921/raw/wh300/km2009_257_07200.raw /home/data/km0921/raw/wh300/km2009_257_14400.raw /home/data/km0921/raw/wh300/km2009_257_21600.raw /home/data/km0921/raw/wh300/km2009_257_28800.raw /home/data/km0921/raw/wh300/km2009_257_36000.raw /home/data/km0921/raw/wh300/km2009_257_43200.raw /home/data/km0921/raw/wh300/km2009_257_50400.raw /home/data/km0921/raw/wh300/km2009_257_57600.raw /home/data/km0921/raw/wh300/km2009_257_64800.raw /home/data/km0921/raw/wh300/km2009_257_72000.raw /home/data/km0921/raw/wh300/km2009_257_79200.raw /home/data/km0921/raw/wh300/km2009_258_00000.raw /home/data/km0921/raw/wh300/km2009_258_07200.raw /home/data/km0921/raw/wh300/km2009_258_14400.raw /home/data/km0921/raw/wh300/km2009_258_21600.raw /home/data/km0921/raw/wh300/km2009_258_28800.raw /home/data/km0921/raw/wh300/km2009_258_36000.raw /home/data/km0921/raw/wh300/km2009_258_43200.raw /home/data/km0921/raw/wh300/km2009_258_50400.raw 2009-09-16 15:56:14,008 DEBUG quick_setup load/ldcodas.tmp exists 2009-09-16 15:56:14,008 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,008 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/load 2009-09-16 15:56:14,008 DEBUG quick_setup running python command "ldcodas" 2009-09-16 15:56:14,009 DEBUG quick_subs in /home/data/km0921/proc/wh300/load 2009-09-16 15:56:14,010 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047', '048', '049', '050', '051', '052', '053', '054', '055', '056', '057', '058', '059', '060', '061', '062', '063', '064', '065', '066', '067', '068', '069', '070', '071', '072', '073', '074', '075', '076', '077', '078', '079', '080', '081', '082', '083', '084', '085', '086', '087', '088', '089', '090', '091', '092', '093', '094', '095', '096', '097', '098', '099', '100', '101', '102', '103', '104', '105', '106', '107', '108', '109', '110', '111', '112', '113', '114', '115', '116', '117'] 2009-09-16 15:56:14,012 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047', '048', '049', '050', '051', '052', '053', '054', '055', '056', '057', '058', '059', '060', '061', '062', '063', '064', '065', '066', '067', '068', '069', '070', '071', '072', '073', '074', '075', '076', '077', '078', '079', '080', '081', '082', '083', '084', '085', '086', '087', '088', '089', '090', '091', '092', '093', '094', '095', '096', '097', '098', '099', '100', '101', '102', '103', '104', '105', '106', '107', '108', '109', '110', '111', '112', '113', '114', '115', '116', '117', '118'] 2009-09-16 15:56:14,014 DEBUG quick_subs starttime is 2009/09/16 11:28:40 2009-09-16 15:56:14,014 DEBUG quick_subs RESETTING thisload_time_range 2009-09-16 15:56:14,014 DEBUG quick_subs time range of data to be loaded: 2009/09/16 11:28:40 to 2009/09/16 15:55:59 2009-09-16 15:56:14,015 DEBUG quick_subs data startdd 258.478241 data enddd 258.663877 2009-09-16 15:56:14,015 DEBUG quick_subs about to load from these cmd files ['ens_blk118.cmd'] 2009-09-16 15:56:14,015 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_km DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2009 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk118.cmd 2009-09-16 15:56:14,015 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2009-09-16 15:56:14,056 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:56:14,057 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:56:14,057 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:56:14,058 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:56:14,080 DEBUG quick_subs database passes. 2009-09-16 15:56:14,080 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:14,080 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,081 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:14,081 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:14,081 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:14,083 DEBUG quick_subs extracting time range 2009-09-16 15:56:14,084 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:55:00 2009-09-16 15:56:14,084 DEBUG quick_subs dd0: 234.746771 dd1: 258.663194 2009-09-16 15:56:14,084 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:56:14,084 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,084 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:14,085 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:56:14,085 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:56:14,087 DEBUG quick_subs extracting time range 2009-09-16 15:56:14,087 DEBUG quick_subs start_end_time 2009/08/23 17:55:21 to 2009/09/16 15:55:00 2009-09-16 15:56:14,087 DEBUG quick_subs dd0: 234.746771 dd1: 258.663194 2009-09-16 15:56:14,088 DEBUG quick_adcp loaded_time_range is 2009/08/23 17:55:21 to 2009/09/16 15:55:00 2009-09-16 15:56:14,088 DEBUG quick_adcp (234.746771 to 258.663194) 2009-09-16 15:56:14,088 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,088 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/adcpdb 2009-09-16 15:56:14,089 DEBUG quick_setup running python command "lst_conf" 2009-09-16 15:56:14,089 DEBUG quick_subs dbname: a_km output: a_km.cnh time_ranges: all 2009-09-16 15:56:14,089 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2009-09-16 15:56:14,188 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2009-09-16 15:56:14,188 DEBUG quick_run executing commands from /home/data/km0921/proc/wh300/edit 2009-09-16 15:56:14,200 DEBUG quick_run setup.m exists. not replacing 2009-09-16 15:56:14,200 DEBUG quick_run asetup.m exists. not replacing 2009-09-16 15:56:14,201 DEBUG quick_run aflagit_setup.m exists. not replacing 2009-09-16 15:56:14,201 DEBUG quick_run ------------ step 4: run setflags ------------- 2009-09-16 15:56:14,201 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,201 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/edit 2009-09-16 15:56:14,201 DEBUG quick_setup running python command "setflags" 2009-09-16 15:56:14,202 DEBUG quick_subs dbname: ../adcpdb/a_km pg_min: 50 set_range_bit time_ranges: all 2009-09-16 15:56:14,202 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-09-16 15:56:14,471 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2009-09-16 15:56:14,471 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:14,471 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:14,471 DEBUG quick_setup running python command "catnav" 2009-09-16 15:56:17,681 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2009-09-16 15:56:17,682 DEBUG quick_run hcorr_inst is posmv 2009-09-16 15:56:17,682 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2009-09-16 15:56:17,683 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:17,683 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/rotate 2009-09-16 15:56:17,684 DEBUG quick_setup running python command "lst_hdg" 2009-09-16 15:56:17,684 DEBUG quick_subs dbname: ../../adcpdb/a_km output: scn.hdg step_size= 1 year_base= 2009 time_ranges: all 2009-09-16 15:56:17,685 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2009-09-16 15:56:17,847 DEBUG quick_mpl Starting plot: hcorr 2009-09-16 15:56:18,320 DEBUG quick_mplplots found 23.916428 days of data 2009-09-16 15:56:18,320 DEBUG quick_mplplots figures with 4 panels per page, 1.000000 days per panel 2009-09-16 15:56:18,320 DEBUG quick_mplplots printing 7 pages 2009-09-16 15:56:24,669 DEBUG quick_mpl Ending plot: hcorr 2009-09-16 15:56:24,669 DEBUG quick_run ------------ step 7: rotate ------------- 2009-09-16 15:56:24,669 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:24,669 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/rotate 2009-09-16 15:56:24,670 DEBUG quick_setup running python command "rotated" 2009-09-16 15:56:24,759 DEBUG quick_subs last rotated time from log file: 2009/09/16 15:25:04 2009-09-16 15:56:24,759 DEBUG quick_subs time range of currently loaded data: 2009/08/23 17:55:21 to 2009/09/16 15:55:00 2009-09-16 15:56:24,760 DEBUG quick_subs (234.746771 to 258.663194) 2009-09-16 15:56:24,762 DEBUG quick_setup cal/rotate/rotate.tmp exists 2009-09-16 15:56:24,763 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:24,763 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/rotate 2009-09-16 15:56:24,763 DEBUG quick_setup running python command "rotate" 2009-09-16 15:56:24,763 DEBUG quick_subs DB_NAME: ../../adcpdb/a_km LOG_FILE: rotate.log TIME_RANGE: 2009/09/16 11:28:40 to 2009/09/16 15:55:59 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2009 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2009-09-16 15:56:24,763 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2009-09-16 15:56:24,772 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-09-16 15:56:24,773 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:56:24,773 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:24,773 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:24,773 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:56:24,774 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:55:21 to 2009/09/16 15:55:00 /* the whole time range */ 2009-09-16 15:56:24,774 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:56:25,256 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-09-16 15:56:25,257 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:25,257 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:25,257 DEBUG quick_setup running python command "refabs" 2009-09-16 15:56:25,257 DEBUG quick_subs fix_file_type: simple reference_file: a_km.nav fix_file: a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 120 gap_tolerance= 10 2009-09-16 15:56:25,258 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-09-16 15:56:25,668 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-09-16 15:56:25,671 DEBUG quick_setup nav/smoothr.tmp exists 2009-09-16 15:56:25,672 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:25,672 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:25,672 DEBUG quick_setup running python command "smoothr" 2009-09-16 15:56:25,672 DEBUG quick_subs reference_file: a_km.nav refabs_output: a_km.ref output: a_km.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 120 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-09-16 15:56:25,673 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-09-16 15:56:27,611 DEBUG quick_npy Starting: refsm 2009-09-16 15:56:28,404 INFO nav dtmin = -0.50 dtmax = 0.50 2009-09-16 15:56:30,127 DEBUG quick_npy Ending: refsm 2009-09-16 15:56:30,127 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-09-16 15:56:30,128 DEBUG quick_setup nav/putnav.tmp exists 2009-09-16 15:56:30,128 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:30,128 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:30,128 DEBUG quick_setup running python command "putnav" 2009-09-16 15:56:30,128 DEBUG quick_subs dbname: ../adcpdb/a_km position_file: a_km_refsm.asc year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-09-16 15:56:30,129 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-09-16 15:56:31,111 DEBUG quick_mpl Starting plot: nav 2009-09-16 15:56:32,438 DEBUG quick_mpl Ending plot: nav 2009-09-16 15:56:32,438 DEBUG quick_mpl Starting plot: refl 2009-09-16 15:56:33,500 DEBUG quick_mplplots found 23.915039 days of data 2009-09-16 15:56:33,500 DEBUG quick_mplplots start day is 234.000000 2009-09-16 15:56:33,500 DEBUG quick_mplplots figures with 2.000000 days per page 2009-09-16 15:56:33,500 DEBUG quick_mplplots printing 13 pages 2009-09-16 15:56:33,501 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2009-09-16 15:56:33,501 INFO quick_mplplots startdd is 234.0 2009-09-16 15:56:33,501 INFO quick_mplplots dt is 2.0 2009-09-16 15:56:44,788 DEBUG quick_mpl Ending plot: refl 2009-09-16 15:56:44,789 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2009-09-16 15:56:44,789 DEBUG quick_run find profile flags ------------ *** ------------- 2009-09-16 15:56:44,789 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:44,789 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/edit 2009-09-16 15:56:44,790 DEBUG quick_setup running python command "aedit" 2009-09-16 15:56:46,713 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2009-09-16 15:56:46,714 DEBUG quick_run starting in: /home/data/km0921/proc/wh300 2009-09-16 15:56:46,714 DEBUG quick_run executing commands from: edit 2009-09-16 15:56:46,718 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_km abadbin_tmp.asc 2009-09-16 15:56:46,743 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_km 20 2009-09-16 15:56:46,756 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-09-16 15:56:47,076 DEBUG quick_run changing directories back to /home/data/km0921/proc/wh300 2009-09-16 15:56:47,076 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2009-09-16 15:56:47,077 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-09-16 15:56:47,077 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:56:47,077 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:47,077 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:47,077 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:56:47,078 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:55:21 to 2009/09/16 15:55:00 /* the whole time range */ 2009-09-16 15:56:47,078 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:56:47,526 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-09-16 15:56:47,526 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:47,527 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:47,527 DEBUG quick_setup running python command "refabs" 2009-09-16 15:56:47,527 DEBUG quick_subs fix_file_type: simple reference_file: a_km.nav fix_file: a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 120 gap_tolerance= 10 2009-09-16 15:56:47,527 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-09-16 15:56:47,842 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-09-16 15:56:47,842 DEBUG quick_setup nav/smoothr.tmp exists 2009-09-16 15:56:47,843 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:47,843 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:47,843 DEBUG quick_setup running python command "smoothr" 2009-09-16 15:56:47,843 DEBUG quick_subs reference_file: a_km.nav refabs_output: a_km.ref output: a_km.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 120 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-09-16 15:56:47,844 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-09-16 15:56:49,678 DEBUG quick_npy Starting: refsm 2009-09-16 15:56:50,508 INFO nav dtmin = -0.50 dtmax = 0.50 2009-09-16 15:56:52,390 DEBUG quick_npy Ending: refsm 2009-09-16 15:56:53,383 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-09-16 15:56:53,383 DEBUG quick_setup nav/putnav.tmp exists 2009-09-16 15:56:53,383 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:56:53,383 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:56:53,383 DEBUG quick_setup running python command "putnav" 2009-09-16 15:56:53,384 DEBUG quick_subs dbname: ../adcpdb/a_km position_file: a_km_refsm.asc year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-09-16 15:56:53,384 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-09-16 15:56:53,904 DEBUG quick_mpl Starting plot: nav 2009-09-16 15:56:55,196 DEBUG quick_mpl Ending plot: nav 2009-09-16 15:56:55,197 DEBUG quick_mpl Starting plot: refl 2009-09-16 15:56:56,412 DEBUG quick_mplplots found 23.915039 days of data 2009-09-16 15:56:56,413 DEBUG quick_mplplots start day is 234.000000 2009-09-16 15:56:56,413 DEBUG quick_mplplots figures with 2.000000 days per page 2009-09-16 15:56:56,413 DEBUG quick_mplplots printing 13 pages 2009-09-16 15:56:56,413 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2009-09-16 15:56:56,414 INFO quick_mplplots startdd is 234.0 2009-09-16 15:56:56,414 INFO quick_mplplots dt is 2.0 2009-09-16 15:57:07,766 DEBUG quick_mpl Ending plot: refl 2009-09-16 15:57:07,766 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2009-09-16 15:57:07,767 DEBUG quick_setup edit/lst_temp.tmp exists 2009-09-16 15:57:07,767 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:07,767 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/edit 2009-09-16 15:57:07,767 DEBUG quick_setup running python command "lst_temp" 2009-09-16 15:57:07,768 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km.tem step_size= 1 year_base= 2009 time_ranges: all 2009-09-16 15:57:07,768 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2009-09-16 15:57:07,971 DEBUG quick_mpl Starting plot: temp 2009-09-16 15:57:08,340 DEBUG quick_mplplots plotting 17188 points 2009-09-16 15:57:08,947 DEBUG quick_mpl Ending plot: temp 2009-09-16 15:57:08,948 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2009-09-16 15:57:08,948 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2009-09-16 15:57:08,949 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:08,949 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/botmtrk 2009-09-16 15:57:08,949 DEBUG quick_setup running python command "lst_btrk" 2009-09-16 15:57:08,949 DEBUG quick_subs dbname: ../../adcpdb/a_km output: a_km.btm step_size= 1 year_base= 2009 time_ranges: 2009/08/23 17:55:21 to 2009/09/16 15:55:00 /* whole time range */ 2009-09-16 15:57:08,949 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2009-09-16 15:57:09,005 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2009-09-16 15:57:09,005 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:09,006 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/botmtrk 2009-09-16 15:57:09,006 DEBUG quick_setup running python command "refabsbt" 2009-09-16 15:57:09,006 DEBUG quick_subs fix_file_type: simple reference_file: a_km.btm fix_file: ../../nav/a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 120 gap_tolerance= 60 2009-09-16 15:57:09,006 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2009-09-16 15:57:09,016 DEBUG quick_mpl Starting plot: btcal 2009-09-16 15:57:10,091 DEBUG quick_mpl Ending plot: btcal 2009-09-16 15:57:10,092 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:57:10,092 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:10,092 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/nav 2009-09-16 15:57:10,093 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:57:10,093 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:55:21 to 2009/09/16 15:55:00 /* the whole time range */ 2009-09-16 15:57:10,094 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:57:10,602 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2009-09-16 15:57:10,603 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:10,603 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/cal/watertrk 2009-09-16 15:57:10,603 DEBUG quick_setup running python command "timslip" 2009-09-16 15:57:10,603 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_km.gps reference_file: ../../nav/a_km.nav output_file: a_km_7.cal year_base= 2009 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2009-09-16 15:57:10,604 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2009-09-16 15:57:10,731 DEBUG quick_mpl Starting plot: wtcal 2009-09-16 15:57:10,741 DEBUG quick_mplplots Found 170 calibration points 2009-09-16 15:57:12,857 DEBUG quick_mpl Ending plot: wtcal 2009-09-16 15:57:12,857 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2009-09-16 15:57:12,858 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:12,858 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/vector 2009-09-16 15:57:12,858 DEBUG quick_setup running python command "timegrid" 2009-09-16 15:57:12,858 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_km.tmp 2009-09-16 15:57:12,868 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:12,868 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/vector 2009-09-16 15:57:12,868 DEBUG quick_setup running python command "as_vect" 2009-09-16 15:57:12,869 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2009-09-16 15:57:13,229 DEBUG quick_asect done making vector matfiles 2009-09-16 15:57:13,230 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:13,230 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/contour 2009-09-16 15:57:13,230 DEBUG quick_setup running python command "timegrid" 2009-09-16 15:57:13,231 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_km.tmp 2009-09-16 15:57:13,247 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:13,247 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/contour 2009-09-16 15:57:13,247 DEBUG quick_setup running python command "as_cont" 2009-09-16 15:57:13,248 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2009-09-16 15:57:13,903 DEBUG quick_setup starting in /home/data/km0921/proc/wh300 2009-09-16 15:57:13,903 DEBUG quick_setup executing commands from /home/data/km0921/proc/wh300/contour 2009-09-16 15:57:13,903 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_km 2009-09-16 15:57:15,565 DEBUG quick_asect done running getmat with "allbins" 2009-09-16 15:57:15,628 INFO root copying NOFIG to /home/adcp/www/figures/wh300_hcorr_plot.png 2009-09-16 15:57:15,628 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/wh300_hcorr_plot_thumb.png 2009-09-16 15:57:15,628 DEBUG root matfile is contour/contour_uv.mat 2009-09-16 15:57:15,911 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/wh300_cont_uv.mat 2009-09-16 15:57:16,406 DEBUG root matfile is vector/vector_uv.mat 2009-09-16 15:57:16,407 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/wh300_vect_uv.mat 2009-09-16 15:57:16,408 DEBUG root matfile is contour/contour_xy.mat 2009-09-16 15:57:16,440 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/wh300_cont_xy.mat 2009-09-16 15:57:16,441 DEBUG root matfile is vector/vector_xy.mat 2009-09-16 15:57:16,442 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/wh300_vect_xy.mat 2009-09-16 15:57:16,442 DEBUG root about to copy file edit/a_km.tem to /home/adcp/www/data/wh300_temp.asc 2009-09-16 15:57:16,748 INFO root copying edit/a_km.tem to /home/adcp/www/data/wh300_temp.asc 2009-09-16 15:57:16,748 INFO root Ending quick_adcp.py 2009-09-16 15:57:16,800 DEBUG quick_setup killed matlab engine