2009-09-16 15:53:08,281 DEBUG root about to write control file parameters to --yearbase 2009 --pingtype bb --cfgbase km0921 --cruisename km0921 --instclass os --instname os38 --dbname a_km --datatype uhdas --datadir /home/data/km0921/raw/os38 --cfgpath /home/data/km0921/proc/os38bb/config --ens_len 300 --ping_headcorr --hcorr_inst posmv --use_topo4edit ## using jitter defaults ## not using matplotlib --delblks 1 --skip_avg --find_pflags --hidedisplay --top_plotbin 1 --quiet --auto --acc_heading_cutoff 0.018000 --npycalc all --mplplots all 2009-09-16 15:53:08,281 DEBUG quick_adcp sys.argv = /home/currents/programs/uhdas/scripts/run_quick.py -d os38bb --npycalc all --mplplots all 2009-09-16 15:53:08,416 DEBUG quick_adcp ------processor dictionary:------ __doc__ __init__ __module__ adcpcal aedit aflagit_setup as_cont as_nav as_vect asetup ashrot btcaluv catnav check_opts cleanup copy_ensfile ddtime def_qlist get_asvars get_cmd_timerange get_data2load_timerange get_filelist get_gyrodh get_headcorrstats get_lstblk_tr get_matcfgstr get_remaining_times get_seapath11dh get_time_range getmat ldcodas list2matcell llgrid loadens loadhdss loadlta loadping loaduh lst_btrk lst_conf lst_hdg lst_temp mpltest opts overlapping plot_lastensq plotbtcal_mpl plothcorr_mpl plotnav_mpl plotrefl_mpl plottemp plottemp_mpl plotwtcal_mpl print_attlog putnav refabs refabsbt refplot refsm rotate rotated run_adcpsect run_applyedit run_calc run_calib run_editsetup run_findpflags run_getheadcorr run_getnav run_listblocks run_loaddata run_lstconfig run_lsttemp run_matfiles run_plotter run_putnav run_rawsetup run_refabs run_refplots run_refsm run_refsm_npy run_rotate run_scandata run_setflags run_smoothr run_updategbin run_xducerxy scanping scanraw setflags smoothr startmatlab timegrid timslip ubprint update_gbin user_defined_headfunc xducerxy zapsetup 2009-09-16 15:53:08,417 DEBUG quick_adcp progdir = /home/currents/programs 2009-09-16 15:53:08,417 DEBUG quick_adcp binos = lnx 2009-09-16 15:53:08,417 INFO quick_setup NOTE: proc_yearbase defaulting to yearbase. specify if different 2009-09-16 15:53:08,418 DEBUG quick_setup yearbase is 2009, proc_yearbase is 2009 2009-09-16 15:53:08,418 DEBUG quick_setup numpy calculations to run: refsm 2009-09-16 15:53:08,418 DEBUG quick_setup mplplots to run: temp, nav, refl, hcorr, wtcal, btcal 2009-09-16 15:53:08,418 DEBUG quick_setup processing data logged with uhdas: 2009-09-16 15:53:08,418 DEBUG quick_setup datatype is uhdas 2009-09-16 15:53:08,419 DEBUG quick_setup pingtype is bb 2009-09-16 15:53:08,419 DEBUG quick_setup instclass is os 2009-09-16 15:53:08,419 DEBUG quick_setup no post-processing heading correction will be used 2009-09-16 15:53:08,420 DEBUG quick_setup transducer depth set in *_cfg.m file 2009-09-16 15:53:08,439 DEBUG quick_subs matcfgstr is: % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os38'; pingtype = 'bb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'km0921',... 'cfgpath' , '/home/data/km0921/proc/os38bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py 2009-09-16 15:53:08,440 DEBUG quick_setup ------- starting Matlab engine ------- 2009-09-16 15:53:08,440 DEBUG quick_setup ['/home/currents/programs/matlab'] 2009-09-16 15:53:08,443 DEBUG call_matlab starting to wait for initial prompt 2009-09-16 15:53:11,608 DEBUG call_matlab received initial prompt 2009-09-16 15:53:11,929 DEBUG quick_adcp cwd is /home/data/km0921/proc/os38bb about to run these steps:editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-09-16 15:53:11,929 DEBUG quick_adcp original fix file is a_km.gps 2009-09-16 15:53:11,929 DEBUG quick_adcp smoothed nav file is a_km_refsm.asc 2009-09-16 15:53:11,930 DEBUG quick_asect extracting matlab files for os38, bb pings 2009-09-16 15:53:14,196 DEBUG quick_subs found 289 files using wildcard expansion from "/home/data/km0921/raw/os38/*.raw" 2009-09-16 15:53:14,196 DEBUG quick_adcp starting with data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/os38/km2009_234_64397.raw /home/data/km0921/raw/os38/km2009_234_64800.raw /home/data/km0921/raw/os38/km2009_234_72000.raw /home/data/km0921/raw/os38/km2009_234_78778.raw /home/data/km0921/raw/os38/km2009_234_79200.raw /home/data/km0921/raw/os38/km2009_235_00000.raw /home/data/km0921/raw/os38/km2009_235_07200.raw /home/data/km0921/raw/os38/km2009_235_14400.raw /home/data/km0921/raw/os38/km2009_235_21600.raw /home/data/km0921/raw/os38/km2009_235_28800.raw /home/data/km0921/raw/os38/km2009_235_36000.raw /home/data/km0921/raw/os38/km2009_235_43200.raw /home/data/km0921/raw/os38/km2009_235_50400.raw /home/data/km0921/raw/os38/km2009_235_57600.raw /home/data/km0921/raw/os38/km2009_235_64800.raw /home/data/km0921/raw/os38/km2009_235_72000.raw /home/data/km0921/raw/os38/km2009_235_79200.raw /home/data/km0921/raw/os38/km2009_236_00000.raw /home/data/km0921/raw/os38/km2009_236_07200.raw /home/data/km0921/raw/os38/km2009_236_14400.raw /home/data/km0921/raw/os38/km2009_236_21600.raw /home/data/km0921/raw/os38/km2009_236_28800.raw /home/data/km0921/raw/os38/km2009_236_36000.raw /home/data/km0921/raw/os38/km2009_236_43200.raw /home/data/km0921/raw/os38/km2009_236_50400.raw /home/data/km0921/raw/os38/km2009_236_57600.raw /home/data/km0921/raw/os38/km2009_236_64800.raw /home/data/km0921/raw/os38/km2009_236_72000.raw /home/data/km0921/raw/os38/km2009_236_79200.raw /home/data/km0921/raw/os38/km2009_237_00000.raw /home/data/km0921/raw/os38/km2009_237_07200.raw /home/data/km0921/raw/os38/km2009_237_14400.raw /home/data/km0921/raw/os38/km2009_237_21600.raw /home/data/km0921/raw/os38/km2009_237_28800.raw /home/data/km0921/raw/os38/km2009_237_36000.raw /home/data/km0921/raw/os38/km2009_237_43200.raw /home/data/km0921/raw/os38/km2009_237_50400.raw 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/home/data/km0921/raw/os38/km2009_256_00000.raw /home/data/km0921/raw/os38/km2009_256_07200.raw /home/data/km0921/raw/os38/km2009_256_14400.raw /home/data/km0921/raw/os38/km2009_256_21600.raw /home/data/km0921/raw/os38/km2009_256_28800.raw /home/data/km0921/raw/os38/km2009_256_36000.raw /home/data/km0921/raw/os38/km2009_256_43200.raw /home/data/km0921/raw/os38/km2009_256_50400.raw /home/data/km0921/raw/os38/km2009_256_57600.raw /home/data/km0921/raw/os38/km2009_256_64800.raw /home/data/km0921/raw/os38/km2009_256_72000.raw /home/data/km0921/raw/os38/km2009_256_79200.raw /home/data/km0921/raw/os38/km2009_257_00000.raw /home/data/km0921/raw/os38/km2009_257_07200.raw /home/data/km0921/raw/os38/km2009_257_14400.raw /home/data/km0921/raw/os38/km2009_257_21600.raw /home/data/km0921/raw/os38/km2009_257_28800.raw /home/data/km0921/raw/os38/km2009_257_36000.raw /home/data/km0921/raw/os38/km2009_257_43200.raw /home/data/km0921/raw/os38/km2009_257_50400.raw /home/data/km0921/raw/os38/km2009_257_57600.raw /home/data/km0921/raw/os38/km2009_257_64800.raw /home/data/km0921/raw/os38/km2009_257_72000.raw /home/data/km0921/raw/os38/km2009_257_79200.raw /home/data/km0921/raw/os38/km2009_258_00000.raw /home/data/km0921/raw/os38/km2009_258_07200.raw /home/data/km0921/raw/os38/km2009_258_14400.raw /home/data/km0921/raw/os38/km2009_258_21600.raw /home/data/km0921/raw/os38/km2009_258_28800.raw /home/data/km0921/raw/os38/km2009_258_36000.raw /home/data/km0921/raw/os38/km2009_258_43200.raw /home/data/km0921/raw/os38/km2009_258_50400.raw 2009-09-16 15:53:14,197 DEBUG quick_adcp LASTFILES invoked. using only 289 files from end of filelist 2009-09-16 15:53:14,197 DEBUG quick_adcp using delblks = 1 2009-09-16 15:53:14,197 DEBUG quick_adcp using data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/os38/km2009_234_64397.raw /home/data/km0921/raw/os38/km2009_234_64800.raw /home/data/km0921/raw/os38/km2009_234_72000.raw /home/data/km0921/raw/os38/km2009_234_78778.raw /home/data/km0921/raw/os38/km2009_234_79200.raw /home/data/km0921/raw/os38/km2009_235_00000.raw /home/data/km0921/raw/os38/km2009_235_07200.raw /home/data/km0921/raw/os38/km2009_235_14400.raw /home/data/km0921/raw/os38/km2009_235_21600.raw /home/data/km0921/raw/os38/km2009_235_28800.raw /home/data/km0921/raw/os38/km2009_235_36000.raw /home/data/km0921/raw/os38/km2009_235_43200.raw /home/data/km0921/raw/os38/km2009_235_50400.raw /home/data/km0921/raw/os38/km2009_235_57600.raw /home/data/km0921/raw/os38/km2009_235_64800.raw /home/data/km0921/raw/os38/km2009_235_72000.raw /home/data/km0921/raw/os38/km2009_235_79200.raw /home/data/km0921/raw/os38/km2009_236_00000.raw /home/data/km0921/raw/os38/km2009_236_07200.raw /home/data/km0921/raw/os38/km2009_236_14400.raw /home/data/km0921/raw/os38/km2009_236_21600.raw /home/data/km0921/raw/os38/km2009_236_28800.raw /home/data/km0921/raw/os38/km2009_236_36000.raw /home/data/km0921/raw/os38/km2009_236_43200.raw /home/data/km0921/raw/os38/km2009_236_50400.raw /home/data/km0921/raw/os38/km2009_236_57600.raw /home/data/km0921/raw/os38/km2009_236_64800.raw /home/data/km0921/raw/os38/km2009_236_72000.raw /home/data/km0921/raw/os38/km2009_236_79200.raw /home/data/km0921/raw/os38/km2009_237_00000.raw /home/data/km0921/raw/os38/km2009_237_07200.raw /home/data/km0921/raw/os38/km2009_237_14400.raw /home/data/km0921/raw/os38/km2009_237_21600.raw /home/data/km0921/raw/os38/km2009_237_28800.raw /home/data/km0921/raw/os38/km2009_237_36000.raw /home/data/km0921/raw/os38/km2009_237_43200.raw /home/data/km0921/raw/os38/km2009_237_50400.raw /home/data/km0921/raw/os38/km2009_237_57600.raw /home/data/km0921/raw/os38/km2009_237_64800.raw /home/data/km0921/raw/os38/km2009_237_72000.raw /home/data/km0921/raw/os38/km2009_237_79200.raw /home/data/km0921/raw/os38/km2009_238_00000.raw /home/data/km0921/raw/os38/km2009_238_07200.raw /home/data/km0921/raw/os38/km2009_238_14400.raw /home/data/km0921/raw/os38/km2009_238_21600.raw /home/data/km0921/raw/os38/km2009_238_28800.raw /home/data/km0921/raw/os38/km2009_238_36000.raw /home/data/km0921/raw/os38/km2009_238_43200.raw /home/data/km0921/raw/os38/km2009_238_50400.raw /home/data/km0921/raw/os38/km2009_238_57600.raw /home/data/km0921/raw/os38/km2009_238_64800.raw /home/data/km0921/raw/os38/km2009_238_72000.raw /home/data/km0921/raw/os38/km2009_238_79200.raw /home/data/km0921/raw/os38/km2009_239_00000.raw /home/data/km0921/raw/os38/km2009_239_07200.raw /home/data/km0921/raw/os38/km2009_239_14400.raw /home/data/km0921/raw/os38/km2009_239_21600.raw /home/data/km0921/raw/os38/km2009_239_28800.raw /home/data/km0921/raw/os38/km2009_239_36000.raw /home/data/km0921/raw/os38/km2009_239_43200.raw /home/data/km0921/raw/os38/km2009_239_50400.raw /home/data/km0921/raw/os38/km2009_239_57600.raw /home/data/km0921/raw/os38/km2009_239_64800.raw /home/data/km0921/raw/os38/km2009_239_72000.raw /home/data/km0921/raw/os38/km2009_239_79200.raw /home/data/km0921/raw/os38/km2009_240_00000.raw /home/data/km0921/raw/os38/km2009_240_07200.raw /home/data/km0921/raw/os38/km2009_240_14400.raw /home/data/km0921/raw/os38/km2009_240_21600.raw /home/data/km0921/raw/os38/km2009_240_28800.raw /home/data/km0921/raw/os38/km2009_240_36000.raw /home/data/km0921/raw/os38/km2009_240_43200.raw /home/data/km0921/raw/os38/km2009_240_50400.raw /home/data/km0921/raw/os38/km2009_240_57600.raw /home/data/km0921/raw/os38/km2009_240_64800.raw /home/data/km0921/raw/os38/km2009_240_72000.raw /home/data/km0921/raw/os38/km2009_240_79200.raw /home/data/km0921/raw/os38/km2009_241_00000.raw /home/data/km0921/raw/os38/km2009_241_07200.raw /home/data/km0921/raw/os38/km2009_241_14400.raw /home/data/km0921/raw/os38/km2009_241_21600.raw /home/data/km0921/raw/os38/km2009_241_28800.raw /home/data/km0921/raw/os38/km2009_241_36000.raw /home/data/km0921/raw/os38/km2009_241_43200.raw /home/data/km0921/raw/os38/km2009_241_50400.raw /home/data/km0921/raw/os38/km2009_241_57600.raw /home/data/km0921/raw/os38/km2009_241_64800.raw /home/data/km0921/raw/os38/km2009_241_72000.raw /home/data/km0921/raw/os38/km2009_241_79200.raw /home/data/km0921/raw/os38/km2009_242_00000.raw /home/data/km0921/raw/os38/km2009_242_07200.raw /home/data/km0921/raw/os38/km2009_242_14400.raw /home/data/km0921/raw/os38/km2009_242_21600.raw /home/data/km0921/raw/os38/km2009_242_28800.raw /home/data/km0921/raw/os38/km2009_242_36000.raw /home/data/km0921/raw/os38/km2009_242_43200.raw /home/data/km0921/raw/os38/km2009_242_50400.raw /home/data/km0921/raw/os38/km2009_242_57600.raw /home/data/km0921/raw/os38/km2009_242_64800.raw /home/data/km0921/raw/os38/km2009_242_72000.raw /home/data/km0921/raw/os38/km2009_242_79200.raw /home/data/km0921/raw/os38/km2009_243_00000.raw /home/data/km0921/raw/os38/km2009_243_07200.raw /home/data/km0921/raw/os38/km2009_243_14400.raw /home/data/km0921/raw/os38/km2009_243_21600.raw /home/data/km0921/raw/os38/km2009_243_28800.raw /home/data/km0921/raw/os38/km2009_243_36000.raw /home/data/km0921/raw/os38/km2009_243_43200.raw /home/data/km0921/raw/os38/km2009_243_50400.raw /home/data/km0921/raw/os38/km2009_243_57600.raw /home/data/km0921/raw/os38/km2009_243_64800.raw /home/data/km0921/raw/os38/km2009_243_72000.raw /home/data/km0921/raw/os38/km2009_243_79200.raw /home/data/km0921/raw/os38/km2009_244_00000.raw /home/data/km0921/raw/os38/km2009_244_07200.raw /home/data/km0921/raw/os38/km2009_244_14400.raw /home/data/km0921/raw/os38/km2009_244_21600.raw /home/data/km0921/raw/os38/km2009_244_28800.raw /home/data/km0921/raw/os38/km2009_244_36000.raw /home/data/km0921/raw/os38/km2009_244_43200.raw /home/data/km0921/raw/os38/km2009_244_50400.raw /home/data/km0921/raw/os38/km2009_244_57600.raw /home/data/km0921/raw/os38/km2009_244_64800.raw /home/data/km0921/raw/os38/km2009_244_72000.raw /home/data/km0921/raw/os38/km2009_244_79200.raw /home/data/km0921/raw/os38/km2009_245_00000.raw /home/data/km0921/raw/os38/km2009_245_07200.raw /home/data/km0921/raw/os38/km2009_245_14400.raw /home/data/km0921/raw/os38/km2009_245_21600.raw /home/data/km0921/raw/os38/km2009_245_28800.raw /home/data/km0921/raw/os38/km2009_245_36000.raw /home/data/km0921/raw/os38/km2009_245_43200.raw /home/data/km0921/raw/os38/km2009_245_50400.raw /home/data/km0921/raw/os38/km2009_245_57600.raw /home/data/km0921/raw/os38/km2009_245_64800.raw /home/data/km0921/raw/os38/km2009_245_72000.raw /home/data/km0921/raw/os38/km2009_245_79200.raw /home/data/km0921/raw/os38/km2009_246_00000.raw /home/data/km0921/raw/os38/km2009_246_07200.raw /home/data/km0921/raw/os38/km2009_246_14400.raw /home/data/km0921/raw/os38/km2009_246_21600.raw /home/data/km0921/raw/os38/km2009_246_28800.raw /home/data/km0921/raw/os38/km2009_246_36000.raw 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/home/data/km0921/raw/os38/km2009_249_72000.raw /home/data/km0921/raw/os38/km2009_249_79200.raw /home/data/km0921/raw/os38/km2009_250_00000.raw /home/data/km0921/raw/os38/km2009_250_07200.raw /home/data/km0921/raw/os38/km2009_250_14400.raw /home/data/km0921/raw/os38/km2009_250_21600.raw /home/data/km0921/raw/os38/km2009_250_28800.raw /home/data/km0921/raw/os38/km2009_250_36000.raw /home/data/km0921/raw/os38/km2009_250_43200.raw /home/data/km0921/raw/os38/km2009_250_50400.raw /home/data/km0921/raw/os38/km2009_250_57600.raw /home/data/km0921/raw/os38/km2009_250_64800.raw /home/data/km0921/raw/os38/km2009_250_72000.raw /home/data/km0921/raw/os38/km2009_250_79200.raw /home/data/km0921/raw/os38/km2009_251_00000.raw /home/data/km0921/raw/os38/km2009_251_07200.raw /home/data/km0921/raw/os38/km2009_251_14400.raw /home/data/km0921/raw/os38/km2009_251_21600.raw /home/data/km0921/raw/os38/km2009_251_28800.raw /home/data/km0921/raw/os38/km2009_251_36000.raw /home/data/km0921/raw/os38/km2009_251_43200.raw /home/data/km0921/raw/os38/km2009_251_50400.raw /home/data/km0921/raw/os38/km2009_251_57600.raw /home/data/km0921/raw/os38/km2009_251_64800.raw /home/data/km0921/raw/os38/km2009_251_72000.raw /home/data/km0921/raw/os38/km2009_251_79200.raw /home/data/km0921/raw/os38/km2009_252_00000.raw /home/data/km0921/raw/os38/km2009_252_07200.raw /home/data/km0921/raw/os38/km2009_252_14400.raw /home/data/km0921/raw/os38/km2009_252_21600.raw /home/data/km0921/raw/os38/km2009_252_28800.raw /home/data/km0921/raw/os38/km2009_252_36000.raw /home/data/km0921/raw/os38/km2009_252_43200.raw /home/data/km0921/raw/os38/km2009_252_50400.raw /home/data/km0921/raw/os38/km2009_252_57600.raw /home/data/km0921/raw/os38/km2009_252_64800.raw /home/data/km0921/raw/os38/km2009_252_72000.raw /home/data/km0921/raw/os38/km2009_252_79200.raw /home/data/km0921/raw/os38/km2009_253_00000.raw /home/data/km0921/raw/os38/km2009_253_07200.raw /home/data/km0921/raw/os38/km2009_253_14400.raw /home/data/km0921/raw/os38/km2009_253_21600.raw /home/data/km0921/raw/os38/km2009_253_28800.raw /home/data/km0921/raw/os38/km2009_253_36000.raw /home/data/km0921/raw/os38/km2009_253_43200.raw /home/data/km0921/raw/os38/km2009_253_50400.raw /home/data/km0921/raw/os38/km2009_253_57600.raw /home/data/km0921/raw/os38/km2009_253_64800.raw /home/data/km0921/raw/os38/km2009_253_72000.raw /home/data/km0921/raw/os38/km2009_253_79200.raw /home/data/km0921/raw/os38/km2009_254_00000.raw /home/data/km0921/raw/os38/km2009_254_07200.raw /home/data/km0921/raw/os38/km2009_254_14400.raw /home/data/km0921/raw/os38/km2009_254_21600.raw /home/data/km0921/raw/os38/km2009_254_28800.raw /home/data/km0921/raw/os38/km2009_254_36000.raw /home/data/km0921/raw/os38/km2009_254_43200.raw /home/data/km0921/raw/os38/km2009_254_50400.raw /home/data/km0921/raw/os38/km2009_254_57600.raw /home/data/km0921/raw/os38/km2009_254_64800.raw /home/data/km0921/raw/os38/km2009_254_72000.raw /home/data/km0921/raw/os38/km2009_254_79200.raw /home/data/km0921/raw/os38/km2009_255_00000.raw /home/data/km0921/raw/os38/km2009_255_07200.raw /home/data/km0921/raw/os38/km2009_255_14400.raw /home/data/km0921/raw/os38/km2009_255_21600.raw /home/data/km0921/raw/os38/km2009_255_28800.raw /home/data/km0921/raw/os38/km2009_255_36000.raw /home/data/km0921/raw/os38/km2009_255_43200.raw /home/data/km0921/raw/os38/km2009_255_50400.raw /home/data/km0921/raw/os38/km2009_255_57600.raw /home/data/km0921/raw/os38/km2009_255_64800.raw /home/data/km0921/raw/os38/km2009_255_72000.raw /home/data/km0921/raw/os38/km2009_255_79200.raw /home/data/km0921/raw/os38/km2009_256_00000.raw /home/data/km0921/raw/os38/km2009_256_07200.raw /home/data/km0921/raw/os38/km2009_256_14400.raw /home/data/km0921/raw/os38/km2009_256_21600.raw /home/data/km0921/raw/os38/km2009_256_28800.raw /home/data/km0921/raw/os38/km2009_256_36000.raw /home/data/km0921/raw/os38/km2009_256_43200.raw /home/data/km0921/raw/os38/km2009_256_50400.raw /home/data/km0921/raw/os38/km2009_256_57600.raw /home/data/km0921/raw/os38/km2009_256_64800.raw /home/data/km0921/raw/os38/km2009_256_72000.raw /home/data/km0921/raw/os38/km2009_256_79200.raw /home/data/km0921/raw/os38/km2009_257_00000.raw /home/data/km0921/raw/os38/km2009_257_07200.raw /home/data/km0921/raw/os38/km2009_257_14400.raw /home/data/km0921/raw/os38/km2009_257_21600.raw /home/data/km0921/raw/os38/km2009_257_28800.raw /home/data/km0921/raw/os38/km2009_257_36000.raw /home/data/km0921/raw/os38/km2009_257_43200.raw /home/data/km0921/raw/os38/km2009_257_50400.raw /home/data/km0921/raw/os38/km2009_257_57600.raw /home/data/km0921/raw/os38/km2009_257_64800.raw /home/data/km0921/raw/os38/km2009_257_72000.raw /home/data/km0921/raw/os38/km2009_257_79200.raw /home/data/km0921/raw/os38/km2009_258_00000.raw /home/data/km0921/raw/os38/km2009_258_07200.raw /home/data/km0921/raw/os38/km2009_258_14400.raw /home/data/km0921/raw/os38/km2009_258_21600.raw /home/data/km0921/raw/os38/km2009_258_28800.raw /home/data/km0921/raw/os38/km2009_258_36000.raw /home/data/km0921/raw/os38/km2009_258_43200.raw /home/data/km0921/raw/os38/km2009_258_50400.raw 2009-09-16 15:53:14,202 DEBUG quick_adcp Wed Sep 16 15:53:14 2009 running quick_adcp.py as follows: --cntfile /home/data/km0921/proc/os38bb/os38bb_qpy.cnt ----- adcpsect variables ------ afilebase a_km cbasename contour dbname a_km dbpath ../adcpdb deeper_boundaries [100, 150, 200, 250, 300, 350, 400, 450, 500, 550, 600, 650, 700, 750, 800, 850, 900, 950, 1000, 1050, 1100, 1150, 1200, 1250, 1300, 1350, 1400, 1450, 1500, 1550, 1600] firstdepth 36 gridnum 80 increment 20 loaded_time_range all numbins 128 outdir . pgmin 50 prefix allbins_ proc_yearbase 2009 rl_endbin 20 rl_startbin 2 ss_string separate timegrid 60 vbasename vector ----- quick_adcp.py variables and current values ------ M acc_heading_cutoff 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posmv head_func None help False hidedisplay True howto_lta False howto_ping False incremental False instclass os instname os38 jitter 15 lastfiles False matcfgstr % begin "matcfgstr" string, created by quick_adcp.py instclass = os; instname = 'os38'; pingtype = 'bb'; proc_yearbase = 2009; yearbase = 2009; cfg =get_uhdascfg('cfgbase' , 'km0921',... 'cfgpath' , '/home/data/km0921/proc/os38bb/config',... 'instclass', instclass,... 'instname' , instname,... 'proc_yearbase', proc_yearbase,... 'yearbase', yearbase,... 'pingtype' , pingtype); gbindirbase = cfg.gbindirbase; allparams = cfg.allparams; % end "matcfgstr" string, created by quick_adcp.py max_BLKprofiles 399 maxrunsecs None min_filter_fraction 0.5 mplplots ['temp', 'nav', 'refl', 'hcorr', 'wtcal', 'btcal'] nosave_editcfg 0 npycalc ['refsm'] num_persistence 24 numbins 128 orig_fixfile a_km.gps overview False pgmin 50 ping_headcorr True pingtype bb post_headcorr False printformats png proc_yearbase 2009 procdir os38bb progdir /home/currents/programs quiet True rawstd_cutoff None rl_endbin 20 rl_startbin 2 rotate_amplitude 1 rotate_angle 0 rotate_file None save_editcfg 1 save_lastens 0 scanfilelist ['/home/data/km0921/raw/os38/km2009_234_64397.raw', '/home/data/km0921/raw/os38/km2009_234_64800.raw', '/home/data/km0921/raw/os38/km2009_234_72000.raw', '/home/data/km0921/raw/os38/km2009_234_78778.raw', '/home/data/km0921/raw/os38/km2009_234_79200.raw', '/home/data/km0921/raw/os38/km2009_235_00000.raw', 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'/home/data/km0921/raw/os38/km2009_257_21600.raw', '/home/data/km0921/raw/os38/km2009_257_28800.raw', '/home/data/km0921/raw/os38/km2009_257_36000.raw', '/home/data/km0921/raw/os38/km2009_257_43200.raw', '/home/data/km0921/raw/os38/km2009_257_50400.raw', '/home/data/km0921/raw/os38/km2009_257_57600.raw', '/home/data/km0921/raw/os38/km2009_257_64800.raw', '/home/data/km0921/raw/os38/km2009_257_72000.raw', '/home/data/km0921/raw/os38/km2009_257_79200.raw', '/home/data/km0921/raw/os38/km2009_258_00000.raw', '/home/data/km0921/raw/os38/km2009_258_07200.raw', '/home/data/km0921/raw/os38/km2009_258_14400.raw', '/home/data/km0921/raw/os38/km2009_258_21600.raw', '/home/data/km0921/raw/os38/km2009_258_28800.raw', '/home/data/km0921/raw/os38/km2009_258_36000.raw', '/home/data/km0921/raw/os38/km2009_258_43200.raw', '/home/data/km0921/raw/os38/km2009_258_50400.raw'] setup_info False skip_avg True smfile a_km_refsm.asc steps2rerun time_angle_base ens_hcorr time_angle_file ens_hcorr.ang timeout_secs 86400 tips False tktail False top_plotbin 1 ub_type 1920 update_gbin False use_refsm True use_smoothr False use_topo4edit True vardoc False varvals False wtrk_step 7 xducer_dx False xducer_dy False yearbase 2009 configured to run the following steps: editsetup scandata loaddata setflags getnav get_headcorr rotate adcpsect refabs smoothnav putnav refplots find_pflags apply_edit navsteps lst_temp calib matfiles 2009-09-16 15:53:14,203 DEBUG quick_run ------------ step 1: scan data (create .scn file) ------------- 2009-09-16 15:53:14,203 DEBUG quick_run scanning files for time ranges... 2009-09-16 15:53:14,204 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb/scan 2009-09-16 15:53:14,204 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/scan 2009-09-16 15:53:14,204 DEBUG quick_setup running python command "scanraw" 2009-09-16 15:53:14,205 DEBUG call_matlab --> clear all 2009-09-16 15:53:14,210 DEBUG call_matlab <-- >> 2009-09-16 15:53:14,210 DEBUG call_matlab --> close all 2009-09-16 15:53:14,325 DEBUG call_matlab <-- >> 2009-09-16 15:53:14,325 DEBUG call_matlab --> cd /home/data/km0921/proc/os38bb/scan 2009-09-16 15:53:14,328 DEBUG call_matlab <-- >> 2009-09-16 15:53:14,328 DEBUG call_matlab --> scan_tmp 2009-09-16 15:53:17,224 DEBUG call_matlab <-- getting config files from "/home/data/km0921/proc/os38bb/config" running "km0921_cfg.m" running "km0921_proc.m" writing scan info to a_km.scn >> 2009-09-16 15:53:17,225 DEBUG quick_run writing time range from a_km.scn to a_km.tr 2009-09-16 15:53:17,225 DEBUG quick_run getting scan time range 2009-09-16 15:53:17,225 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,226 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/scan 2009-09-16 15:53:17,226 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,226 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,228 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,230 DEBUG quick_subs start_end_time 2009/08/23 17:53:26 to 2009/09/16 15:52:09 2009-09-16 15:53:17,230 DEBUG quick_subs dd0: 234.745440 dd1: 258.661215 2009-09-16 15:53:17,231 DEBUG quick_adcp in quick_adcp.py: after scan, about to look for database timesin /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,231 DEBUG quick_adcp looking for database with adcpdb/a_km*.blk 2009-09-16 15:53:17,233 DEBUG quick_adcp database found: listing blocks 2009-09-16 15:53:17,233 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:53:17,234 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:53:17,234 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:53:17,235 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:53:17,278 DEBUG quick_subs database passes. 2009-09-16 15:53:17,279 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,279 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,279 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,280 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,280 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,282 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,282 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,282 DEBUG quick_subs dd0: 234.748877 dd1: 258.640660 2009-09-16 15:53:17,283 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,283 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,283 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,284 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,284 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,285 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,286 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,286 DEBUG quick_subs dd0: 234.748877 dd1: 258.640660 2009-09-16 15:53:17,286 DEBUG quick_adcp in quick_adcp.py: before load, just looked for database times 2009-09-16 15:53:17,287 DEBUG quick_adcp origdb_time_range is 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,287 DEBUG quick_adcp (234.748877 to 258.640660) 2009-09-16 15:53:17,287 DEBUG quick_run ------------ step 2: load data into codas database ------------- 2009-09-16 15:53:17,288 DEBUG quick_subs getting current (remaining after deletion) database times 2009-09-16 15:53:17,289 DEBUG quick_subs ['adcpdb/a_km039.blk', 'adcpdb/a_km033.blk', 'adcpdb/a_km022.blk', 'adcpdb/a_km041.blk', 'adcpdb/a_km046.blk', 'adcpdb/a_km017.blk', 'adcpdb/a_km014.blk', 'adcpdb/a_km047.blk', 'adcpdb/a_km031.blk', 'adcpdb/a_km045.blk', 'adcpdb/a_km021.blk', 'adcpdb/a_km003.blk', 'adcpdb/a_km011.blk', 'adcpdb/a_km037.blk', 'adcpdb/a_km018.blk', 'adcpdb/a_km009.blk', 'adcpdb/a_km015.blk', 'adcpdb/a_km038.blk', 'adcpdb/a_km025.blk', 'adcpdb/a_kmdir.blk', 'adcpdb/a_km030.blk', 'adcpdb/a_km002.blk', 'adcpdb/a_km034.blk', 'adcpdb/a_km008.blk', 'adcpdb/a_km027.blk', 'adcpdb/a_km044.blk', 'adcpdb/a_km042.blk', 'adcpdb/a_km035.blk', 'adcpdb/a_km040.blk', 'adcpdb/a_km001.blk', 'adcpdb/a_km010.blk', 'adcpdb/a_km032.blk', 'adcpdb/a_km007.blk', 'adcpdb/a_km028.blk', 'adcpdb/a_km036.blk', 'adcpdb/a_km004.blk', 'adcpdb/a_km019.blk', 'adcpdb/a_km012.blk', 'adcpdb/a_km005.blk', 'adcpdb/a_km024.blk', 'adcpdb/a_km020.blk', 'adcpdb/a_km043.blk', 'adcpdb/a_km016.blk', 'adcpdb/a_km013.blk', 'adcpdb/a_km006.blk', 'adcpdb/a_km023.blk', 'adcpdb/a_km026.blk', 'adcpdb/a_km029.blk'] 2009-09-16 15:53:17,289 DEBUG quick_subs length is 48 2009-09-16 15:53:17,289 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:53:17,290 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:53:17,291 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:53:17,291 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:53:17,312 DEBUG quick_subs database passes. 2009-09-16 15:53:17,313 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,313 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,313 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,314 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,314 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,315 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,316 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,316 DEBUG quick_subs dd0: 234.748877 dd1: 258.640660 2009-09-16 15:53:17,316 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,317 DEBUG quick_subs reading time range 2009-09-16 15:53:17,317 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,317 DEBUG quick_subs dd0: 234.748877 dd1: 258.640660 2009-09-16 15:53:17,319 INFO quick_subs Wed Sep 16 15:53:17 2009 2009-09-16 15:53:17,319 INFO quick_subs checking database time range by listblk 2009-09-16 15:53:17,319 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:53:17,320 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:53:17,320 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:53:17,321 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:53:17,343 DEBUG quick_subs database passes. 2009-09-16 15:53:17,343 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,344 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,344 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,344 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,345 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,346 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,347 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:22:33 2009-09-16 15:53:17,347 DEBUG quick_subs dd0: 234.748877 dd1: 258.640660 2009-09-16 15:53:17,350 INFO quick_subs found line /* 0 n= 46 a_km001.blk */ 2009/08/23 17:58:23 to 2009/08/23 21:48:02 2009-09-16 15:53:17,350 INFO quick_subs found line /* 1 n= 146 a_km002.blk */ 2009/08/23 21:58:10 to 2009/08/24 10:17:38 2009-09-16 15:53:17,350 INFO quick_subs found line /* 2 n= 146 a_km003.blk */ 2009/08/24 10:22:44 to 2009/08/24 22:42:12 2009-09-16 15:53:17,351 INFO quick_subs found line /* 3 n= 146 a_km004.blk */ 2009/08/24 22:47:18 to 2009/08/25 11:06:46 2009-09-16 15:53:17,351 INFO quick_subs found line /* 4 n= 146 a_km005.blk */ 2009/08/25 11:11:52 to 2009/08/25 23:41:31 2009-09-16 15:53:17,351 INFO quick_subs found line /* 5 n= 146 a_km006.blk */ 2009/08/25 23:46:37 to 2009/08/26 12:11:11 2009-09-16 15:53:17,351 INFO quick_subs found line /* 6 n= 146 a_km007.blk */ 2009/08/26 12:16:17 to 2009/08/27 00:45:57 2009-09-16 15:53:17,352 INFO quick_subs found line /* 7 n= 146 a_km008.blk */ 2009/08/27 00:51:03 to 2009/08/27 13:15:36 2009-09-16 15:53:17,352 INFO quick_subs found line /* 8 n= 146 a_km009.blk */ 2009/08/27 13:20:42 to 2009/08/28 01:40:10 2009-09-16 15:53:17,352 INFO quick_subs found line /* 9 n= 146 a_km010.blk */ 2009/08/28 01:45:16 to 2009/08/28 14:04:44 2009-09-16 15:53:17,353 INFO quick_subs found line /* 10 n= 146 a_km011.blk */ 2009/08/28 14:09:50 to 2009/08/29 02:29:18 2009-09-16 15:53:17,353 INFO quick_subs found line /* 11 n= 146 a_km012.blk */ 2009/08/29 02:34:24 to 2009/08/29 14:53:51 2009-09-16 15:53:17,353 INFO quick_subs found line /* 12 n= 146 a_km013.blk */ 2009/08/29 14:58:57 to 2009/08/30 03:28:37 2009-09-16 15:53:17,353 INFO quick_subs found line /* 13 n= 146 a_km014.blk */ 2009/08/30 03:33:43 to 2009/08/30 15:53:11 2009-09-16 15:53:17,354 INFO quick_subs found line /* 14 n= 146 a_km015.blk */ 2009/08/30 15:58:17 to 2009/08/31 04:17:27 2009-09-16 15:53:17,354 INFO quick_subs found line /* 15 n= 146 a_km016.blk */ 2009/08/31 04:22:33 to 2009/08/31 16:42:00 2009-09-16 15:53:17,354 INFO quick_subs found line /* 16 n= 146 a_km017.blk */ 2009/08/31 16:47:06 to 2009/09/01 05:06:34 2009-09-16 15:53:17,355 INFO quick_subs found line /* 17 n= 146 a_km018.blk */ 2009/09/01 05:11:40 to 2009/09/01 17:31:08 2009-09-16 15:53:17,355 INFO quick_subs found line /* 18 n= 146 a_km019.blk */ 2009/09/01 17:36:14 to 2009/09/02 05:55:42 2009-09-16 15:53:17,355 INFO quick_subs found line /* 19 n= 146 a_km020.blk */ 2009/09/02 06:00:48 to 2009/09/02 18:25:21 2009-09-16 15:53:17,356 INFO quick_subs found line /* 20 n= 146 a_km021.blk */ 2009/09/02 18:30:27 to 2009/09/03 06:49:55 2009-09-16 15:53:17,356 INFO quick_subs found line /* 21 n= 146 a_km022.blk */ 2009/09/03 06:55:01 to 2009/09/03 19:14:29 2009-09-16 15:53:17,356 INFO quick_subs found line /* 22 n= 146 a_km023.blk */ 2009/09/03 19:19:35 to 2009/09/04 07:44:09 2009-09-16 15:53:17,356 INFO quick_subs found line /* 23 n= 146 a_km024.blk */ 2009/09/04 07:49:15 to 2009/09/04 20:08:42 2009-09-16 15:53:17,357 INFO quick_subs found line /* 24 n= 146 a_km025.blk */ 2009/09/04 20:13:48 to 2009/09/05 08:33:16 2009-09-16 15:53:17,357 INFO quick_subs found line /* 25 n= 146 a_km026.blk */ 2009/09/05 08:38:22 to 2009/09/05 20:57:50 2009-09-16 15:53:17,357 INFO quick_subs found line /* 26 n= 146 a_km027.blk */ 2009/09/05 21:02:56 to 2009/09/06 09:22:24 2009-09-16 15:53:17,358 INFO quick_subs found line /* 27 n= 146 a_km028.blk */ 2009/09/06 09:27:30 to 2009/09/06 21:52:03 2009-09-16 15:53:17,358 INFO quick_subs found line /* 28 n= 146 a_km029.blk */ 2009/09/06 21:57:09 to 2009/09/07 10:16:37 2009-09-16 15:53:17,358 INFO quick_subs found line /* 29 n= 146 a_km030.blk */ 2009/09/07 10:21:43 to 2009/09/07 22:41:11 2009-09-16 15:53:17,359 INFO quick_subs found line /* 30 n= 146 a_km031.blk */ 2009/09/07 22:46:17 to 2009/09/08 11:15:57 2009-09-16 15:53:17,359 INFO quick_subs found line /* 31 n= 146 a_km032.blk */ 2009/09/08 11:21:03 to 2009/09/08 23:40:30 2009-09-16 15:53:17,359 INFO quick_subs found line /* 32 n= 146 a_km033.blk */ 2009/09/08 23:45:36 to 2009/09/09 12:04:58 2009-09-16 15:53:17,360 INFO quick_subs found line /* 33 n= 146 a_km034.blk */ 2009/09/09 12:10:04 to 2009/09/10 00:29:38 2009-09-16 15:53:17,360 INFO quick_subs found line /* 34 n= 146 a_km035.blk */ 2009/09/10 00:34:44 to 2009/09/10 12:54:12 2009-09-16 15:53:17,360 INFO quick_subs found line /* 35 n= 146 a_km036.blk */ 2009/09/10 12:59:18 to 2009/09/11 01:23:51 2009-09-16 15:53:17,361 INFO quick_subs found line /* 36 n= 146 a_km037.blk */ 2009/09/11 01:28:57 to 2009/09/11 13:48:25 2009-09-16 15:53:17,361 INFO quick_subs found line /* 37 n= 146 a_km038.blk */ 2009/09/11 13:53:31 to 2009/09/12 02:12:59 2009-09-16 15:53:17,361 INFO quick_subs found line /* 38 n= 146 a_km039.blk */ 2009/09/12 02:18:05 to 2009/09/12 14:41:45 2009-09-16 15:53:17,361 INFO quick_subs found line /* 39 n= 146 a_km040.blk */ 2009/09/12 14:46:51 to 2009/09/13 03:06:19 2009-09-16 15:53:17,362 INFO quick_subs found line /* 40 n= 146 a_km041.blk */ 2009/09/13 03:11:25 to 2009/09/13 15:35:04 2009-09-16 15:53:17,362 INFO quick_subs found line /* 41 n= 146 a_km042.blk */ 2009/09/13 15:40:10 to 2009/09/14 03:59:38 2009-09-16 15:53:17,362 INFO quick_subs found line /* 42 n= 146 a_km043.blk */ 2009/09/14 04:04:44 to 2009/09/14 16:24:12 2009-09-16 15:53:17,363 INFO quick_subs found line /* 43 n= 146 a_km044.blk */ 2009/09/14 16:29:18 to 2009/09/15 04:47:52 2009-09-16 15:53:17,363 INFO quick_subs found line /* 44 n= 146 a_km045.blk */ 2009/09/15 04:52:58 to 2009/09/15 17:12:25 2009-09-16 15:53:17,363 INFO quick_subs found line /* 45 n= 146 a_km046.blk */ 2009/09/15 17:17:31 to 2009/09/16 05:41:11 2009-09-16 15:53:17,364 INFO quick_subs found line /* 46 n= 114 a_km047.blk */ 2009/09/16 05:46:17 to 2009/09/16 15:22:33 2009-09-16 15:53:17,364 INFO quick_subs scan data start at 234.7454398 2009-09-16 15:53:17,364 INFO quick_subs scan time range: 2009/08/23 17:53:26 to 2009/09/16 15:52:09 2009-09-16 15:53:17,364 INFO quick_subs codasdb ends at 258.6406597 (2009/09/16 15:22:33) 2009-09-16 15:53:17,365 DEBUG quick_subs ... changed dirs, in /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,366 DEBUG quick_subs deleting these files: ['a_km047.blk'] 2009-09-16 15:53:17,367 DEBUG quick_subs getting current (remaining after deletion) database times 2009-09-16 15:53:17,367 DEBUG quick_subs ['adcpdb/a_km039.blk', 'adcpdb/a_km033.blk', 'adcpdb/a_km022.blk', 'adcpdb/a_km041.blk', 'adcpdb/a_km046.blk', 'adcpdb/a_km017.blk', 'adcpdb/a_km014.blk', 'adcpdb/a_km031.blk', 'adcpdb/a_km045.blk', 'adcpdb/a_km021.blk', 'adcpdb/a_km003.blk', 'adcpdb/a_km011.blk', 'adcpdb/a_km037.blk', 'adcpdb/a_km018.blk', 'adcpdb/a_km009.blk', 'adcpdb/a_km015.blk', 'adcpdb/a_km038.blk', 'adcpdb/a_km025.blk', 'adcpdb/a_km030.blk', 'adcpdb/a_km002.blk', 'adcpdb/a_km034.blk', 'adcpdb/a_km008.blk', 'adcpdb/a_km027.blk', 'adcpdb/a_km044.blk', 'adcpdb/a_km042.blk', 'adcpdb/a_km035.blk', 'adcpdb/a_km040.blk', 'adcpdb/a_km001.blk', 'adcpdb/a_km010.blk', 'adcpdb/a_km032.blk', 'adcpdb/a_km007.blk', 'adcpdb/a_km028.blk', 'adcpdb/a_km036.blk', 'adcpdb/a_km004.blk', 'adcpdb/a_km019.blk', 'adcpdb/a_km012.blk', 'adcpdb/a_km005.blk', 'adcpdb/a_km024.blk', 'adcpdb/a_km020.blk', 'adcpdb/a_km043.blk', 'adcpdb/a_km016.blk', 'adcpdb/a_km013.blk', 'adcpdb/a_km006.blk', 'adcpdb/a_km023.blk', 'adcpdb/a_km026.blk', 'adcpdb/a_km029.blk'] 2009-09-16 15:53:17,368 DEBUG quick_subs length is 46 2009-09-16 15:53:17,369 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:53:17,369 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:53:17,369 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:53:17,397 DEBUG quick_subs database passes. 2009-09-16 15:53:17,397 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,398 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,398 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,398 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,398 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,400 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,401 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 05:41:11 2009-09-16 15:53:17,401 DEBUG quick_subs dd0: 234.748877 dd1: 258.236933 2009-09-16 15:53:17,401 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,402 DEBUG quick_subs reading time range 2009-09-16 15:53:17,402 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 05:41:11 2009-09-16 15:53:17,402 DEBUG quick_subs dd0: 234.748877 dd1: 258.236933 2009-09-16 15:53:17,403 DEBUG quick_subs codas database currently goes from 2009/08/23 17:58:23 to 2009/09/16 05:41:11 2009-09-16 15:53:17,403 DEBUG quick_subs (234.748877 to 258.236933) 2009-09-16 15:53:17,404 DEBUG quick_subs 001found existing adcpdb blocks: %s 002found existing adcpdb blocks: %s 003found existing adcpdb blocks: %s 004found existing adcpdb blocks: %s 005found existing adcpdb blocks: %s 006found existing adcpdb blocks: %s 007found existing adcpdb blocks: %s 008found existing adcpdb blocks: %s 009found existing adcpdb blocks: %s 010found existing adcpdb blocks: %s 011found existing adcpdb blocks: %s 012found existing adcpdb blocks: %s 013found existing adcpdb blocks: %s 014found existing adcpdb blocks: %s 015found existing adcpdb blocks: %s 016found existing adcpdb blocks: %s 017found existing adcpdb blocks: %s 018found existing adcpdb blocks: %s 019found existing adcpdb blocks: %s 020found existing adcpdb blocks: %s 021found existing adcpdb blocks: %s 022found existing adcpdb blocks: %s 023found existing adcpdb blocks: %s 024found existing adcpdb blocks: %s 025found existing adcpdb blocks: %s 026found existing adcpdb blocks: %s 027found existing adcpdb blocks: %s 028found existing adcpdb blocks: %s 029found existing adcpdb blocks: %s 030found existing adcpdb blocks: %s 031found existing adcpdb blocks: %s 032found existing adcpdb blocks: %s 033found existing adcpdb blocks: %s 034found existing adcpdb blocks: %s 035found existing adcpdb blocks: %s 036found existing adcpdb blocks: %s 037found existing adcpdb blocks: %s 038found existing adcpdb blocks: %s 039found existing adcpdb blocks: %s 040found existing adcpdb blocks: %s 041found existing adcpdb blocks: %s 042found existing adcpdb blocks: %s 043found existing adcpdb blocks: %s 044found existing adcpdb blocks: %s 045found existing adcpdb blocks: %s 046 2009-09-16 15:53:17,408 DEBUG quick_subs found existing ens_blk files: 001 002 003 004 005 006 007 008 009 010 011 012 013 014 015 016 017 018 019 020 021 022 023 024 025 026 027 028 029 030 031 032 033 034 035 036 037 038 039 040 041 042 043 044 045 046 047 2009-09-16 15:53:17,414 DEBUG quick_subs checked: loaded blkstrs: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046'] 2009-09-16 15:53:17,415 DEBUG quick_subs checked: unloaded blkstrs: ['047'] 2009-09-16 15:53:17,415 DEBUG quick_subs first unloaded file is load/ens_blk047.cmd 2009-09-16 15:53:17,431 DEBUG quick_subs data goes from 2009/09/16 05:46:17 to 2009/09/16 15:52:09 2009-09-16 15:53:17,431 DEBUG quick_subs (258.240475 to 258.661215) 2009-09-16 15:53:17,432 DEBUG quick_run using data files (as seen from scan/ or load/ directory): /home/data/km0921/raw/os38/km2009_234_64397.raw /home/data/km0921/raw/os38/km2009_234_64800.raw /home/data/km0921/raw/os38/km2009_234_72000.raw /home/data/km0921/raw/os38/km2009_234_78778.raw /home/data/km0921/raw/os38/km2009_234_79200.raw /home/data/km0921/raw/os38/km2009_235_00000.raw /home/data/km0921/raw/os38/km2009_235_07200.raw /home/data/km0921/raw/os38/km2009_235_14400.raw /home/data/km0921/raw/os38/km2009_235_21600.raw /home/data/km0921/raw/os38/km2009_235_28800.raw /home/data/km0921/raw/os38/km2009_235_36000.raw /home/data/km0921/raw/os38/km2009_235_43200.raw /home/data/km0921/raw/os38/km2009_235_50400.raw /home/data/km0921/raw/os38/km2009_235_57600.raw /home/data/km0921/raw/os38/km2009_235_64800.raw /home/data/km0921/raw/os38/km2009_235_72000.raw /home/data/km0921/raw/os38/km2009_235_79200.raw /home/data/km0921/raw/os38/km2009_236_00000.raw /home/data/km0921/raw/os38/km2009_236_07200.raw /home/data/km0921/raw/os38/km2009_236_14400.raw /home/data/km0921/raw/os38/km2009_236_21600.raw /home/data/km0921/raw/os38/km2009_236_28800.raw /home/data/km0921/raw/os38/km2009_236_36000.raw /home/data/km0921/raw/os38/km2009_236_43200.raw /home/data/km0921/raw/os38/km2009_236_50400.raw /home/data/km0921/raw/os38/km2009_236_57600.raw /home/data/km0921/raw/os38/km2009_236_64800.raw /home/data/km0921/raw/os38/km2009_236_72000.raw /home/data/km0921/raw/os38/km2009_236_79200.raw /home/data/km0921/raw/os38/km2009_237_00000.raw /home/data/km0921/raw/os38/km2009_237_07200.raw /home/data/km0921/raw/os38/km2009_237_14400.raw /home/data/km0921/raw/os38/km2009_237_21600.raw /home/data/km0921/raw/os38/km2009_237_28800.raw /home/data/km0921/raw/os38/km2009_237_36000.raw /home/data/km0921/raw/os38/km2009_237_43200.raw /home/data/km0921/raw/os38/km2009_237_50400.raw /home/data/km0921/raw/os38/km2009_237_57600.raw /home/data/km0921/raw/os38/km2009_237_64800.raw /home/data/km0921/raw/os38/km2009_237_72000.raw /home/data/km0921/raw/os38/km2009_237_79200.raw /home/data/km0921/raw/os38/km2009_238_00000.raw /home/data/km0921/raw/os38/km2009_238_07200.raw /home/data/km0921/raw/os38/km2009_238_14400.raw /home/data/km0921/raw/os38/km2009_238_21600.raw /home/data/km0921/raw/os38/km2009_238_28800.raw /home/data/km0921/raw/os38/km2009_238_36000.raw /home/data/km0921/raw/os38/km2009_238_43200.raw /home/data/km0921/raw/os38/km2009_238_50400.raw /home/data/km0921/raw/os38/km2009_238_57600.raw /home/data/km0921/raw/os38/km2009_238_64800.raw /home/data/km0921/raw/os38/km2009_238_72000.raw /home/data/km0921/raw/os38/km2009_238_79200.raw /home/data/km0921/raw/os38/km2009_239_00000.raw /home/data/km0921/raw/os38/km2009_239_07200.raw /home/data/km0921/raw/os38/km2009_239_14400.raw /home/data/km0921/raw/os38/km2009_239_21600.raw /home/data/km0921/raw/os38/km2009_239_28800.raw /home/data/km0921/raw/os38/km2009_239_36000.raw /home/data/km0921/raw/os38/km2009_239_43200.raw /home/data/km0921/raw/os38/km2009_239_50400.raw /home/data/km0921/raw/os38/km2009_239_57600.raw /home/data/km0921/raw/os38/km2009_239_64800.raw /home/data/km0921/raw/os38/km2009_239_72000.raw /home/data/km0921/raw/os38/km2009_239_79200.raw /home/data/km0921/raw/os38/km2009_240_00000.raw /home/data/km0921/raw/os38/km2009_240_07200.raw /home/data/km0921/raw/os38/km2009_240_14400.raw /home/data/km0921/raw/os38/km2009_240_21600.raw /home/data/km0921/raw/os38/km2009_240_28800.raw /home/data/km0921/raw/os38/km2009_240_36000.raw /home/data/km0921/raw/os38/km2009_240_43200.raw /home/data/km0921/raw/os38/km2009_240_50400.raw /home/data/km0921/raw/os38/km2009_240_57600.raw /home/data/km0921/raw/os38/km2009_240_64800.raw /home/data/km0921/raw/os38/km2009_240_72000.raw /home/data/km0921/raw/os38/km2009_240_79200.raw /home/data/km0921/raw/os38/km2009_241_00000.raw /home/data/km0921/raw/os38/km2009_241_07200.raw /home/data/km0921/raw/os38/km2009_241_14400.raw /home/data/km0921/raw/os38/km2009_241_21600.raw /home/data/km0921/raw/os38/km2009_241_28800.raw /home/data/km0921/raw/os38/km2009_241_36000.raw /home/data/km0921/raw/os38/km2009_241_43200.raw /home/data/km0921/raw/os38/km2009_241_50400.raw /home/data/km0921/raw/os38/km2009_241_57600.raw /home/data/km0921/raw/os38/km2009_241_64800.raw /home/data/km0921/raw/os38/km2009_241_72000.raw /home/data/km0921/raw/os38/km2009_241_79200.raw /home/data/km0921/raw/os38/km2009_242_00000.raw /home/data/km0921/raw/os38/km2009_242_07200.raw /home/data/km0921/raw/os38/km2009_242_14400.raw /home/data/km0921/raw/os38/km2009_242_21600.raw /home/data/km0921/raw/os38/km2009_242_28800.raw /home/data/km0921/raw/os38/km2009_242_36000.raw /home/data/km0921/raw/os38/km2009_242_43200.raw /home/data/km0921/raw/os38/km2009_242_50400.raw /home/data/km0921/raw/os38/km2009_242_57600.raw /home/data/km0921/raw/os38/km2009_242_64800.raw /home/data/km0921/raw/os38/km2009_242_72000.raw /home/data/km0921/raw/os38/km2009_242_79200.raw /home/data/km0921/raw/os38/km2009_243_00000.raw /home/data/km0921/raw/os38/km2009_243_07200.raw /home/data/km0921/raw/os38/km2009_243_14400.raw /home/data/km0921/raw/os38/km2009_243_21600.raw /home/data/km0921/raw/os38/km2009_243_28800.raw /home/data/km0921/raw/os38/km2009_243_36000.raw /home/data/km0921/raw/os38/km2009_243_43200.raw /home/data/km0921/raw/os38/km2009_243_50400.raw /home/data/km0921/raw/os38/km2009_243_57600.raw /home/data/km0921/raw/os38/km2009_243_64800.raw /home/data/km0921/raw/os38/km2009_243_72000.raw /home/data/km0921/raw/os38/km2009_243_79200.raw /home/data/km0921/raw/os38/km2009_244_00000.raw /home/data/km0921/raw/os38/km2009_244_07200.raw /home/data/km0921/raw/os38/km2009_244_14400.raw /home/data/km0921/raw/os38/km2009_244_21600.raw /home/data/km0921/raw/os38/km2009_244_28800.raw /home/data/km0921/raw/os38/km2009_244_36000.raw /home/data/km0921/raw/os38/km2009_244_43200.raw /home/data/km0921/raw/os38/km2009_244_50400.raw /home/data/km0921/raw/os38/km2009_244_57600.raw /home/data/km0921/raw/os38/km2009_244_64800.raw /home/data/km0921/raw/os38/km2009_244_72000.raw /home/data/km0921/raw/os38/km2009_244_79200.raw /home/data/km0921/raw/os38/km2009_245_00000.raw /home/data/km0921/raw/os38/km2009_245_07200.raw /home/data/km0921/raw/os38/km2009_245_14400.raw /home/data/km0921/raw/os38/km2009_245_21600.raw /home/data/km0921/raw/os38/km2009_245_28800.raw /home/data/km0921/raw/os38/km2009_245_36000.raw /home/data/km0921/raw/os38/km2009_245_43200.raw /home/data/km0921/raw/os38/km2009_245_50400.raw /home/data/km0921/raw/os38/km2009_245_57600.raw /home/data/km0921/raw/os38/km2009_245_64800.raw /home/data/km0921/raw/os38/km2009_245_72000.raw /home/data/km0921/raw/os38/km2009_245_79200.raw /home/data/km0921/raw/os38/km2009_246_00000.raw /home/data/km0921/raw/os38/km2009_246_07200.raw /home/data/km0921/raw/os38/km2009_246_14400.raw /home/data/km0921/raw/os38/km2009_246_21600.raw /home/data/km0921/raw/os38/km2009_246_28800.raw /home/data/km0921/raw/os38/km2009_246_36000.raw /home/data/km0921/raw/os38/km2009_246_43200.raw /home/data/km0921/raw/os38/km2009_246_50400.raw /home/data/km0921/raw/os38/km2009_246_57600.raw /home/data/km0921/raw/os38/km2009_246_64800.raw /home/data/km0921/raw/os38/km2009_246_72000.raw /home/data/km0921/raw/os38/km2009_246_79200.raw /home/data/km0921/raw/os38/km2009_247_00000.raw /home/data/km0921/raw/os38/km2009_247_07200.raw /home/data/km0921/raw/os38/km2009_247_14400.raw /home/data/km0921/raw/os38/km2009_247_21600.raw /home/data/km0921/raw/os38/km2009_247_28800.raw /home/data/km0921/raw/os38/km2009_247_36000.raw /home/data/km0921/raw/os38/km2009_247_43200.raw /home/data/km0921/raw/os38/km2009_247_50400.raw /home/data/km0921/raw/os38/km2009_247_57600.raw /home/data/km0921/raw/os38/km2009_247_64800.raw /home/data/km0921/raw/os38/km2009_247_72000.raw /home/data/km0921/raw/os38/km2009_247_79200.raw /home/data/km0921/raw/os38/km2009_248_00000.raw /home/data/km0921/raw/os38/km2009_248_07200.raw /home/data/km0921/raw/os38/km2009_248_14400.raw /home/data/km0921/raw/os38/km2009_248_21600.raw /home/data/km0921/raw/os38/km2009_248_28800.raw /home/data/km0921/raw/os38/km2009_248_36000.raw /home/data/km0921/raw/os38/km2009_248_43200.raw /home/data/km0921/raw/os38/km2009_248_50400.raw /home/data/km0921/raw/os38/km2009_248_57600.raw /home/data/km0921/raw/os38/km2009_248_64800.raw /home/data/km0921/raw/os38/km2009_248_72000.raw /home/data/km0921/raw/os38/km2009_248_79200.raw /home/data/km0921/raw/os38/km2009_249_00000.raw /home/data/km0921/raw/os38/km2009_249_07200.raw /home/data/km0921/raw/os38/km2009_249_14400.raw /home/data/km0921/raw/os38/km2009_249_21600.raw /home/data/km0921/raw/os38/km2009_249_28800.raw /home/data/km0921/raw/os38/km2009_249_36000.raw /home/data/km0921/raw/os38/km2009_249_43200.raw /home/data/km0921/raw/os38/km2009_249_50400.raw /home/data/km0921/raw/os38/km2009_249_57600.raw /home/data/km0921/raw/os38/km2009_249_64800.raw /home/data/km0921/raw/os38/km2009_249_72000.raw /home/data/km0921/raw/os38/km2009_249_79200.raw /home/data/km0921/raw/os38/km2009_250_00000.raw /home/data/km0921/raw/os38/km2009_250_07200.raw /home/data/km0921/raw/os38/km2009_250_14400.raw /home/data/km0921/raw/os38/km2009_250_21600.raw /home/data/km0921/raw/os38/km2009_250_28800.raw /home/data/km0921/raw/os38/km2009_250_36000.raw /home/data/km0921/raw/os38/km2009_250_43200.raw /home/data/km0921/raw/os38/km2009_250_50400.raw /home/data/km0921/raw/os38/km2009_250_57600.raw /home/data/km0921/raw/os38/km2009_250_64800.raw /home/data/km0921/raw/os38/km2009_250_72000.raw /home/data/km0921/raw/os38/km2009_250_79200.raw /home/data/km0921/raw/os38/km2009_251_00000.raw /home/data/km0921/raw/os38/km2009_251_07200.raw /home/data/km0921/raw/os38/km2009_251_14400.raw /home/data/km0921/raw/os38/km2009_251_21600.raw /home/data/km0921/raw/os38/km2009_251_28800.raw /home/data/km0921/raw/os38/km2009_251_36000.raw /home/data/km0921/raw/os38/km2009_251_43200.raw /home/data/km0921/raw/os38/km2009_251_50400.raw /home/data/km0921/raw/os38/km2009_251_57600.raw /home/data/km0921/raw/os38/km2009_251_64800.raw /home/data/km0921/raw/os38/km2009_251_72000.raw /home/data/km0921/raw/os38/km2009_251_79200.raw /home/data/km0921/raw/os38/km2009_252_00000.raw /home/data/km0921/raw/os38/km2009_252_07200.raw /home/data/km0921/raw/os38/km2009_252_14400.raw /home/data/km0921/raw/os38/km2009_252_21600.raw /home/data/km0921/raw/os38/km2009_252_28800.raw /home/data/km0921/raw/os38/km2009_252_36000.raw /home/data/km0921/raw/os38/km2009_252_43200.raw /home/data/km0921/raw/os38/km2009_252_50400.raw /home/data/km0921/raw/os38/km2009_252_57600.raw /home/data/km0921/raw/os38/km2009_252_64800.raw /home/data/km0921/raw/os38/km2009_252_72000.raw /home/data/km0921/raw/os38/km2009_252_79200.raw /home/data/km0921/raw/os38/km2009_253_00000.raw /home/data/km0921/raw/os38/km2009_253_07200.raw /home/data/km0921/raw/os38/km2009_253_14400.raw /home/data/km0921/raw/os38/km2009_253_21600.raw /home/data/km0921/raw/os38/km2009_253_28800.raw /home/data/km0921/raw/os38/km2009_253_36000.raw /home/data/km0921/raw/os38/km2009_253_43200.raw /home/data/km0921/raw/os38/km2009_253_50400.raw /home/data/km0921/raw/os38/km2009_253_57600.raw /home/data/km0921/raw/os38/km2009_253_64800.raw /home/data/km0921/raw/os38/km2009_253_72000.raw /home/data/km0921/raw/os38/km2009_253_79200.raw /home/data/km0921/raw/os38/km2009_254_00000.raw /home/data/km0921/raw/os38/km2009_254_07200.raw /home/data/km0921/raw/os38/km2009_254_14400.raw /home/data/km0921/raw/os38/km2009_254_21600.raw /home/data/km0921/raw/os38/km2009_254_28800.raw /home/data/km0921/raw/os38/km2009_254_36000.raw /home/data/km0921/raw/os38/km2009_254_43200.raw /home/data/km0921/raw/os38/km2009_254_50400.raw /home/data/km0921/raw/os38/km2009_254_57600.raw /home/data/km0921/raw/os38/km2009_254_64800.raw /home/data/km0921/raw/os38/km2009_254_72000.raw /home/data/km0921/raw/os38/km2009_254_79200.raw /home/data/km0921/raw/os38/km2009_255_00000.raw /home/data/km0921/raw/os38/km2009_255_07200.raw /home/data/km0921/raw/os38/km2009_255_14400.raw /home/data/km0921/raw/os38/km2009_255_21600.raw /home/data/km0921/raw/os38/km2009_255_28800.raw /home/data/km0921/raw/os38/km2009_255_36000.raw /home/data/km0921/raw/os38/km2009_255_43200.raw /home/data/km0921/raw/os38/km2009_255_50400.raw /home/data/km0921/raw/os38/km2009_255_57600.raw /home/data/km0921/raw/os38/km2009_255_64800.raw /home/data/km0921/raw/os38/km2009_255_72000.raw /home/data/km0921/raw/os38/km2009_255_79200.raw /home/data/km0921/raw/os38/km2009_256_00000.raw /home/data/km0921/raw/os38/km2009_256_07200.raw /home/data/km0921/raw/os38/km2009_256_14400.raw /home/data/km0921/raw/os38/km2009_256_21600.raw /home/data/km0921/raw/os38/km2009_256_28800.raw /home/data/km0921/raw/os38/km2009_256_36000.raw /home/data/km0921/raw/os38/km2009_256_43200.raw /home/data/km0921/raw/os38/km2009_256_50400.raw /home/data/km0921/raw/os38/km2009_256_57600.raw /home/data/km0921/raw/os38/km2009_256_64800.raw /home/data/km0921/raw/os38/km2009_256_72000.raw /home/data/km0921/raw/os38/km2009_256_79200.raw /home/data/km0921/raw/os38/km2009_257_00000.raw /home/data/km0921/raw/os38/km2009_257_07200.raw /home/data/km0921/raw/os38/km2009_257_14400.raw /home/data/km0921/raw/os38/km2009_257_21600.raw /home/data/km0921/raw/os38/km2009_257_28800.raw /home/data/km0921/raw/os38/km2009_257_36000.raw /home/data/km0921/raw/os38/km2009_257_43200.raw /home/data/km0921/raw/os38/km2009_257_50400.raw /home/data/km0921/raw/os38/km2009_257_57600.raw /home/data/km0921/raw/os38/km2009_257_64800.raw /home/data/km0921/raw/os38/km2009_257_72000.raw /home/data/km0921/raw/os38/km2009_257_79200.raw /home/data/km0921/raw/os38/km2009_258_00000.raw /home/data/km0921/raw/os38/km2009_258_07200.raw /home/data/km0921/raw/os38/km2009_258_14400.raw /home/data/km0921/raw/os38/km2009_258_21600.raw /home/data/km0921/raw/os38/km2009_258_28800.raw /home/data/km0921/raw/os38/km2009_258_36000.raw /home/data/km0921/raw/os38/km2009_258_43200.raw /home/data/km0921/raw/os38/km2009_258_50400.raw 2009-09-16 15:53:17,432 INFO quick_run Wed Sep 16 15:53:17 2009 2009-09-16 15:53:17,432 INFO quick_run about to load uhdas files 2009-09-16 15:53:17,432 INFO quick_run /home/data/km0921/raw/os38/km2009_234_64397.raw /home/data/km0921/raw/os38/km2009_234_64800.raw /home/data/km0921/raw/os38/km2009_234_72000.raw /home/data/km0921/raw/os38/km2009_234_78778.raw /home/data/km0921/raw/os38/km2009_234_79200.raw /home/data/km0921/raw/os38/km2009_235_00000.raw 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/home/data/km0921/raw/os38/km2009_256_64800.raw /home/data/km0921/raw/os38/km2009_256_72000.raw /home/data/km0921/raw/os38/km2009_256_79200.raw /home/data/km0921/raw/os38/km2009_257_00000.raw /home/data/km0921/raw/os38/km2009_257_07200.raw /home/data/km0921/raw/os38/km2009_257_14400.raw /home/data/km0921/raw/os38/km2009_257_21600.raw /home/data/km0921/raw/os38/km2009_257_28800.raw /home/data/km0921/raw/os38/km2009_257_36000.raw /home/data/km0921/raw/os38/km2009_257_43200.raw /home/data/km0921/raw/os38/km2009_257_50400.raw /home/data/km0921/raw/os38/km2009_257_57600.raw /home/data/km0921/raw/os38/km2009_257_64800.raw /home/data/km0921/raw/os38/km2009_257_72000.raw /home/data/km0921/raw/os38/km2009_257_79200.raw /home/data/km0921/raw/os38/km2009_258_00000.raw /home/data/km0921/raw/os38/km2009_258_07200.raw /home/data/km0921/raw/os38/km2009_258_14400.raw /home/data/km0921/raw/os38/km2009_258_21600.raw /home/data/km0921/raw/os38/km2009_258_28800.raw /home/data/km0921/raw/os38/km2009_258_36000.raw /home/data/km0921/raw/os38/km2009_258_43200.raw /home/data/km0921/raw/os38/km2009_258_50400.raw 2009-09-16 15:53:17,433 DEBUG quick_setup load/ldcodas.tmp exists 2009-09-16 15:53:17,433 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,433 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/load 2009-09-16 15:53:17,433 DEBUG quick_setup running python command "ldcodas" 2009-09-16 15:53:17,433 DEBUG quick_subs in /home/data/km0921/proc/os38bb/load 2009-09-16 15:53:17,434 DEBUG quick_subs found block strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046'] 2009-09-16 15:53:17,435 DEBUG quick_subs found cmd blk strings: ['001', '002', '003', '004', '005', '006', '007', '008', '009', '010', '011', '012', '013', '014', '015', '016', '017', '018', '019', '020', '021', '022', '023', '024', '025', '026', '027', '028', '029', '030', '031', '032', '033', '034', '035', '036', '037', '038', '039', '040', '041', '042', '043', '044', '045', '046', '047'] 2009-09-16 15:53:17,437 DEBUG quick_subs starttime is 2009/09/16 05:46:17 2009-09-16 15:53:17,437 DEBUG quick_subs RESETTING thisload_time_range 2009-09-16 15:53:17,437 DEBUG quick_subs time range of data to be loaded: 2009/09/16 05:46:17 to 2009/09/16 15:52:09 2009-09-16 15:53:17,437 DEBUG quick_subs data startdd 258.240475 data enddd 258.661215 2009-09-16 15:53:17,437 DEBUG quick_subs about to load from these cmd files ['ens_blk047.cmd'] 2009-09-16 15:53:17,438 DEBUG quick_subs DATABASE_NAME: ../adcpdb/a_km DEFINITION_FILE: vmadcp.def LOG_FILE: load.log YEAR_BASE: 2009 cmd_file_list /* use only if specifying cmd paths, not "@" */ END ./ens_blk047.cmd 2009-09-16 15:53:17,438 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/ldcodas ldcodas.tmp 2009-09-16 15:53:17,531 DEBUG quick_subs removing a_kmdir.blk 2009-09-16 15:53:17,532 DEBUG quick_subs about to run mkblkdir 2009-09-16 15:53:17,532 DEBUG quick_subs database still exists; rerunning mkdirblk 2009-09-16 15:53:17,532 DEBUG quick_subs running /home/currents/programs/codas3/bin/lnx/mkblkdir mkblkdir.tmp 2009-09-16 15:53:17,546 DEBUG quick_subs database passes. 2009-09-16 15:53:17,547 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,547 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,547 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,547 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,548 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,549 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,549 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:48:03 2009-09-16 15:53:17,549 DEBUG quick_subs dd0: 234.748877 dd1: 258.658368 2009-09-16 15:53:17,550 DEBUG quick_subs writing time range from a_km.lst to a_km.tr 2009-09-16 15:53:17,550 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,550 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,550 DEBUG quick_setup running python command "get_time_range" 2009-09-16 15:53:17,550 DEBUG quick_subs about to set opts to proc.opts, in get_time_range... 2009-09-16 15:53:17,551 DEBUG quick_subs extracting time range 2009-09-16 15:53:17,552 DEBUG quick_subs start_end_time 2009/08/23 17:58:23 to 2009/09/16 15:48:03 2009-09-16 15:53:17,552 DEBUG quick_subs dd0: 234.748877 dd1: 258.658368 2009-09-16 15:53:17,552 DEBUG quick_adcp loaded_time_range is 2009/08/23 17:58:23 to 2009/09/16 15:48:03 2009-09-16 15:53:17,552 DEBUG quick_adcp (234.748877 to 258.658368) 2009-09-16 15:53:17,553 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,553 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/adcpdb 2009-09-16 15:53:17,553 DEBUG quick_setup running python command "lst_conf" 2009-09-16 15:53:17,553 DEBUG quick_subs dbname: a_km output: a_km.cnh time_ranges: all 2009-09-16 15:53:17,553 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_conf lst_conf.tmp 2009-09-16 15:53:17,614 DEBUG quick_run ------------ step 3 (create suitable setup files for editing) ------------- 2009-09-16 15:53:17,615 DEBUG quick_run executing commands from /home/data/km0921/proc/os38bb/edit 2009-09-16 15:53:17,615 DEBUG quick_run setup.m exists. not replacing 2009-09-16 15:53:17,615 DEBUG quick_run asetup.m exists. not replacing 2009-09-16 15:53:17,615 DEBUG quick_run aflagit_setup.m exists. not replacing 2009-09-16 15:53:17,616 DEBUG quick_run ------------ step 4: run setflags ------------- 2009-09-16 15:53:17,616 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,616 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/edit 2009-09-16 15:53:17,616 DEBUG quick_setup running python command "setflags" 2009-09-16 15:53:17,616 DEBUG quick_subs dbname: ../adcpdb/a_km pg_min: 50 set_range_bit time_ranges: all 2009-09-16 15:53:17,617 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-09-16 15:53:17,793 DEBUG quick_run ------------ step 5: get fixes from load/*.gps2 files ------------- 2009-09-16 15:53:17,794 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:17,794 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:17,794 DEBUG quick_setup running python command "catnav" 2009-09-16 15:53:21,524 DEBUG quick_run ------------ step 6: get heading correction (if applicable) ------------- 2009-09-16 15:53:21,524 DEBUG quick_run hcorr_inst is posmv 2009-09-16 15:53:21,524 DEBUG quick_setup cal/rotate/lst_hdg.tmp exists 2009-09-16 15:53:21,524 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:21,525 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/rotate 2009-09-16 15:53:21,525 DEBUG quick_setup running python command "lst_hdg" 2009-09-16 15:53:21,525 DEBUG quick_subs dbname: ../../adcpdb/a_km output: scn.hdg step_size= 1 year_base= 2009 time_ranges: all 2009-09-16 15:53:21,526 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_hdg lst_hdg.tmp 2009-09-16 15:53:21,740 DEBUG quick_mpl Starting plot: hcorr 2009-09-16 15:53:21,950 DEBUG quick_mplplots found 23.909491 days of data 2009-09-16 15:53:21,951 DEBUG quick_mplplots figures with 4 panels per page, 1.000000 days per panel 2009-09-16 15:53:21,951 DEBUG quick_mplplots printing 7 pages 2009-09-16 15:53:29,432 DEBUG quick_mpl Ending plot: hcorr 2009-09-16 15:53:29,433 DEBUG quick_run ------------ step 7: rotate ------------- 2009-09-16 15:53:29,433 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:29,433 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/rotate 2009-09-16 15:53:29,433 DEBUG quick_setup running python command "rotated" 2009-09-16 15:53:29,526 DEBUG quick_subs last rotated time from log file: 2009/09/16 15:22:39 2009-09-16 15:53:29,526 DEBUG quick_subs time range of currently loaded data: 2009/08/23 17:58:23 to 2009/09/16 15:48:03 2009-09-16 15:53:29,527 DEBUG quick_subs (234.748877 to 258.658368) 2009-09-16 15:53:29,529 DEBUG quick_setup cal/rotate/rotate.tmp exists 2009-09-16 15:53:29,529 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:29,530 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/rotate 2009-09-16 15:53:29,530 DEBUG quick_setup running python command "rotate" 2009-09-16 15:53:29,530 DEBUG quick_subs DB_NAME: ../../adcpdb/a_km LOG_FILE: rotate.log TIME_RANGE: 2009/09/16 05:46:17 to 2009/09/16 15:52:09 /* only from scanned files */ OPTION_LIST: water_and_bottom_track: year_base= 2009 /* time_angle_file: (NOT USED -- rotation is done in ensembles) */ amplitude= 1 angle_0= 0 end end 2009-09-16 15:53:29,530 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/rotate rotate.tmp 2009-09-16 15:53:29,684 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-09-16 15:53:29,684 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:53:29,684 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:29,685 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:29,685 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:53:29,685 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:58:23 to 2009/09/16 15:48:03 /* the whole time range */ 2009-09-16 15:53:29,685 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:53:30,067 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-09-16 15:53:30,068 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:30,068 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:30,068 DEBUG quick_setup running python command "refabs" 2009-09-16 15:53:30,068 DEBUG quick_subs fix_file_type: simple reference_file: a_km.nav fix_file: a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-09-16 15:53:30,069 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-09-16 15:53:30,264 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-09-16 15:53:30,264 DEBUG quick_setup nav/smoothr.tmp exists 2009-09-16 15:53:30,264 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:30,265 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:30,265 DEBUG quick_setup running python command "smoothr" 2009-09-16 15:53:30,265 DEBUG quick_subs reference_file: a_km.nav refabs_output: a_km.ref output: a_km.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-09-16 15:53:30,265 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-09-16 15:53:30,987 DEBUG quick_npy Starting: refsm 2009-09-16 15:53:31,487 INFO nav dtmin = -0.50 dtmax = 0.50 2009-09-16 15:53:32,418 DEBUG quick_npy Ending: refsm 2009-09-16 15:53:32,419 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-09-16 15:53:32,419 DEBUG quick_setup nav/putnav.tmp exists 2009-09-16 15:53:32,419 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:32,420 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:32,420 DEBUG quick_setup running python command "putnav" 2009-09-16 15:53:32,420 DEBUG quick_subs dbname: ../adcpdb/a_km position_file: a_km_refsm.asc year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-09-16 15:53:32,421 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-09-16 15:53:32,997 DEBUG quick_mpl Starting plot: nav 2009-09-16 15:53:34,052 DEBUG quick_mpl Ending plot: nav 2009-09-16 15:53:34,053 DEBUG quick_mpl Starting plot: refl 2009-09-16 15:53:34,495 DEBUG quick_mplplots found 23.902408 days of data 2009-09-16 15:53:34,496 DEBUG quick_mplplots start day is 234.000000 2009-09-16 15:53:34,496 DEBUG quick_mplplots figures with 2.000000 days per page 2009-09-16 15:53:34,496 DEBUG quick_mplplots printing 13 pages 2009-09-16 15:53:34,496 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2009-09-16 15:53:34,497 INFO quick_mplplots startdd is 234.0 2009-09-16 15:53:34,497 INFO quick_mplplots dt is 2.0 2009-09-16 15:53:46,308 DEBUG quick_mpl Ending plot: refl 2009-09-16 15:53:46,309 DEBUG quick_run ------------ step 13: automatically find profile flags ------------- 2009-09-16 15:53:46,309 DEBUG quick_run find profile flags ------------ *** ------------- 2009-09-16 15:53:46,310 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:46,310 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/edit 2009-09-16 15:53:46,310 DEBUG quick_setup running python command "aedit" 2009-09-16 15:53:51,546 DEBUG quick_run ------------ step 14: apply all profile flags to database ------------- 2009-09-16 15:53:51,546 DEBUG quick_run starting in: /home/data/km0921/proc/os38bb 2009-09-16 15:53:51,547 DEBUG quick_run executing commands from: edit 2009-09-16 15:53:51,549 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/dbupdate ../adcpdb/a_km abottom_tmp.asc 2009-09-16 15:53:51,615 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/badbin ../adcpdb/a_km abadbin_tmp.asc 2009-09-16 15:53:51,649 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/set_lgb ../adcpdb/a_km 30 2009-09-16 15:53:51,790 DEBUG quick_run about to run /home/currents/programs/codas3/bin/lnx/setflags setflags.tmp 2009-09-16 15:53:51,941 DEBUG quick_run changing directories back to /home/data/km0921/proc/os38bb 2009-09-16 15:53:51,942 DEBUG quick_adcp ------------ step 15: rerun nav steps, redo reflayer plots ------------- 2009-09-16 15:53:51,942 DEBUG quick_run ------------ step 8: run adcpsect (for calib) ------------- 2009-09-16 15:53:51,943 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:53:51,943 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:51,943 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:51,944 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:53:51,944 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:58:23 to 2009/09/16 15:48:03 /* the whole time range */ 2009-09-16 15:53:51,944 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:53:52,193 DEBUG quick_run ------------ step 9: run refabs (for calib) ------------- 2009-09-16 15:53:52,193 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:52,193 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:52,193 DEBUG quick_setup running python command "refabs" 2009-09-16 15:53:52,194 DEBUG quick_subs fix_file_type: simple reference_file: a_km.nav fix_file: a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 10 2009-09-16 15:53:52,194 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabs refabs.tmp 2009-09-16 15:53:52,346 DEBUG quick_run ------------ step 10: get smoothed navigation (for calib) ------------- 2009-09-16 15:53:52,347 DEBUG quick_setup nav/smoothr.tmp exists 2009-09-16 15:53:52,347 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:52,348 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:52,348 DEBUG quick_setup running python command "smoothr" 2009-09-16 15:53:52,349 DEBUG quick_subs reference_file: a_km.nav refabs_output: a_km.ref output: a_km.sm filter_hwidth= 0.0208 min_filter_fraction= 0.5 max_gap_ratio= 0.05 max_gap_distance= 50 max_gap_time= 30 /* 0.5 minutes */ ensemble_time= 300 max_speed= 5.0 min_speed= 1.0 iterations= 5 fix_to_dr_limit= 0.00050 2009-09-16 15:53:52,349 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/smoothr smoothr.tmp 2009-09-16 15:53:53,233 DEBUG quick_npy Starting: refsm 2009-09-16 15:53:55,497 INFO nav dtmin = -0.50 dtmax = 0.50 2009-09-16 15:53:56,292 DEBUG quick_npy Ending: refsm 2009-09-16 15:53:56,293 DEBUG quick_run ------------ step 11: put smoothed navigation back into database ------------- 2009-09-16 15:53:56,293 DEBUG quick_setup nav/putnav.tmp exists 2009-09-16 15:53:56,293 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:53:56,293 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:53:56,293 DEBUG quick_setup running python command "putnav" 2009-09-16 15:53:56,294 DEBUG quick_subs dbname: ../adcpdb/a_km position_file: a_km_refsm.asc year_base= 2009 tolerance= 5 navigation_sources: gps end 2009-09-16 15:53:56,294 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/putnav putnav.tmp 2009-09-16 15:53:56,504 DEBUG quick_mpl Starting plot: nav 2009-09-16 15:53:57,462 DEBUG quick_mpl Ending plot: nav 2009-09-16 15:53:57,463 DEBUG quick_mpl Starting plot: refl 2009-09-16 15:53:58,015 DEBUG quick_mplplots found 23.902408 days of data 2009-09-16 15:53:58,015 DEBUG quick_mplplots start day is 234.000000 2009-09-16 15:53:58,015 DEBUG quick_mplplots figures with 2.000000 days per page 2009-09-16 15:53:58,016 DEBUG quick_mplplots printing 13 pages 2009-09-16 15:53:58,016 DEBUG quick_mplplots yrange will be [1.000000, 1.000000] 2009-09-16 15:53:58,016 INFO quick_mplplots startdd is 234.0 2009-09-16 15:53:58,016 INFO quick_mplplots dt is 2.0 2009-09-16 15:54:10,098 DEBUG quick_mpl Ending plot: refl 2009-09-16 15:54:10,099 DEBUG quick_run ------------ step 16: list temperature and plot it ------------- 2009-09-16 15:54:10,099 DEBUG quick_setup edit/lst_temp.tmp exists 2009-09-16 15:54:10,100 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:10,101 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/edit 2009-09-16 15:54:10,101 DEBUG quick_setup running python command "lst_temp" 2009-09-16 15:54:10,101 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km.tem step_size= 1 year_base= 2009 time_ranges: all 2009-09-16 15:54:10,102 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_temp lst_temp.tmp 2009-09-16 15:54:10,301 DEBUG quick_mpl Starting plot: temp 2009-09-16 15:54:10,451 DEBUG quick_mplplots plotting 6735 points 2009-09-16 15:54:11,186 DEBUG quick_mpl Ending plot: temp 2009-09-16 15:54:11,187 DEBUG quick_run ------------ step 17: bottom track and watertrack calibrations ------------- 2009-09-16 15:54:11,187 DEBUG quick_setup cal/botmtrk/lst_btrk.tmp exists 2009-09-16 15:54:11,187 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:11,188 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/botmtrk 2009-09-16 15:54:11,188 DEBUG quick_setup running python command "lst_btrk" 2009-09-16 15:54:11,189 DEBUG quick_subs dbname: ../../adcpdb/a_km output: a_km.btm step_size= 1 year_base= 2009 time_ranges: 2009/08/23 17:58:23 to 2009/09/16 15:48:03 /* whole time range */ 2009-09-16 15:54:11,189 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/lst_btrk lst_btrk.tmp 2009-09-16 15:54:11,273 DEBUG quick_setup cal/botmtrk/refabsbt.tmp exists 2009-09-16 15:54:11,273 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:11,273 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/botmtrk 2009-09-16 15:54:11,274 DEBUG quick_setup running python command "refabsbt" 2009-09-16 15:54:11,274 DEBUG quick_subs fix_file_type: simple reference_file: a_km.btm fix_file: ../../nav/a_km.gps output: a_km.ref year_base= 2009 ensemble_length= 300 gap_tolerance= 60 2009-09-16 15:54:11,275 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/refabsbt refabsbt.tmp 2009-09-16 15:54:11,333 DEBUG quick_mpl Starting plot: btcal 2009-09-16 15:54:11,335 DEBUG quick_mplplots No data in a_km.btm 2009-09-16 15:54:11,335 DEBUG quick_mplplots Returning from Btplot with no output 2009-09-16 15:54:11,335 DEBUG quick_mpl Ending plot: btcal 2009-09-16 15:54:11,336 DEBUG quick_setup nav/as_nav.tmp exists 2009-09-16 15:54:11,336 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:11,336 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/nav 2009-09-16 15:54:11,336 DEBUG quick_setup running python command "as_nav" 2009-09-16 15:54:11,337 DEBUG quick_subs dbname: ../adcpdb/a_km output: a_km step_size: 1 ndepth: 20 time_ranges: separate year_base= 2009 option_list: pg_min= 50 navigation: reference_bins 2 to 20 end statistics: mean units= 0.01 /* cm/s instead of default m/s */ end flag_mask: ALL_BITS end end 2009/08/23 17:58:23 to 2009/09/16 15:48:03 /* the whole time range */ 2009-09-16 15:54:11,337 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_nav.tmp 2009-09-16 15:54:11,544 DEBUG quick_setup cal/watertrk/timslip.tmp exists 2009-09-16 15:54:11,545 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:11,545 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/cal/watertrk 2009-09-16 15:54:11,545 DEBUG quick_setup running python command "timslip" 2009-09-16 15:54:11,546 DEBUG quick_subs fix_file_type: simple fix_file: ../../nav/a_km.gps reference_file: ../../nav/a_km.nav output_file: a_km_7.cal year_base= 2009 min_n_fixes= 7 /* 5 7 9 */ n_refs= 7 /* 5 7 9 */ i_ref_l0= 1 i_ref_l1= 2 /* 1 2 3 */ i_ref_r0= 5 /* 4 5 6 */ i_ref_r1= 6 /* 4 6 8 */ up_thresh= 3.0 /* m/s */ down_thresh= 3.0 /* m/s */ turn_speed= 2.0 /* m/s */ turn_thresh= 60 /* degrees */ dtmax= 360 /* seconds, for 300-second ensembles */ tolerance= 5.e-5 /* days, about 5 seconds */ grid: ensemble use_shifted_times? no 2009-09-16 15:54:11,546 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timslip timslip.tmp 2009-09-16 15:54:11,657 DEBUG quick_mpl Starting plot: wtcal 2009-09-16 15:54:11,665 DEBUG quick_mplplots Found 84 calibration points 2009-09-16 15:54:14,416 DEBUG quick_mpl Ending plot: wtcal 2009-09-16 15:54:14,417 DEBUG quick_asect ------------ step 18: make matlab files for plotting ------------- 2009-09-16 15:54:14,417 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:14,418 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/vector 2009-09-16 15:54:14,418 DEBUG quick_setup running python command "timegrid" 2009-09-16 15:54:14,418 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_km.tmp 2009-09-16 15:54:14,496 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:14,497 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/vector 2009-09-16 15:54:14,497 DEBUG quick_setup running python command "as_vect" 2009-09-16 15:54:14,498 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_vect.tmp 2009-09-16 15:54:14,905 DEBUG quick_asect done making vector matfiles 2009-09-16 15:54:14,905 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:14,906 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/contour 2009-09-16 15:54:14,906 DEBUG quick_setup running python command "timegrid" 2009-09-16 15:54:14,907 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/timegrid a_km.tmp 2009-09-16 15:54:14,923 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:14,924 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/contour 2009-09-16 15:54:14,924 DEBUG quick_setup running python command "as_cont" 2009-09-16 15:54:14,925 DEBUG quick_setup about to run /home/currents/programs/codas3/bin/lnx/adcpsect as_cont.tmp 2009-09-16 15:54:15,344 DEBUG quick_setup starting in /home/data/km0921/proc/os38bb 2009-09-16 15:54:15,345 DEBUG quick_setup executing commands from /home/data/km0921/proc/os38bb/contour 2009-09-16 15:54:15,345 DEBUG quick_setup about to run getmat -qrs -f allbins_ ../adcpdb/a_km 2009-09-16 15:54:18,547 DEBUG quick_asect done running getmat with "allbins" 2009-09-16 15:54:18,925 INFO root copying NOFIG to /home/adcp/www/figures/os38bb_hcorr_plot.png 2009-09-16 15:54:18,935 INFO root copying NOFIG to /home/adcp/www/figures/thumbnails/os38bb_hcorr_plot_thumb.png 2009-09-16 15:54:18,935 DEBUG root matfile is contour/contour_uv.mat 2009-09-16 15:54:18,957 INFO root copying contour/contour_uv.mat to /home/adcp/www/data/os38bb_cont_uv.mat 2009-09-16 15:54:18,958 DEBUG root matfile is vector/vector_uv.mat 2009-09-16 15:54:23,592 INFO root copying vector/vector_uv.mat to /home/adcp/www/data/os38bb_vect_uv.mat 2009-09-16 15:54:23,592 DEBUG root matfile is contour/contour_xy.mat 2009-09-16 15:54:23,793 INFO root copying contour/contour_xy.mat to /home/adcp/www/data/os38bb_cont_xy.mat 2009-09-16 15:54:23,794 DEBUG root matfile is vector/vector_xy.mat 2009-09-16 15:54:23,879 INFO root copying vector/vector_xy.mat to /home/adcp/www/data/os38bb_vect_xy.mat 2009-09-16 15:54:23,879 DEBUG root about to copy file edit/a_km.tem to /home/adcp/www/data/os38bb_temp.asc 2009-09-16 15:54:23,903 INFO root copying edit/a_km.tem to /home/adcp/www/data/os38bb_temp.asc 2009-09-16 15:54:23,904 INFO root Ending quick_adcp.py 2009-09-16 15:54:24,112 DEBUG quick_setup killed matlab engine